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Volumn 4, Issue 3, 2006, Pages 0403-0410

Complete mitochondrial genome and phylogeny of pleistocene mammoth Mammuthus primigenius

Author keywords

[No Author keywords available]

Indexed keywords

DNA FRAGMENT; GENOMIC DNA; MITOCHONDRIAL DNA; MITOCHONDRIAL RNA; NUCLEOTIDE;

EID: 33644977768     PISSN: 15457885     EISSN: 15457885     Source Type: Journal    
DOI: 10.1371/journal.pbio.0040073     Document Type: Article
Times cited : (108)

References (33)
  • 1
    • 0002527349 scopus 로고
    • Origin and evolution of Elephantidae
    • Maglio VJ (1973) Origin and evolution of Elephantidae. Trans Am Phil Soc 63: 1-149.
    • (1973) Trans Am Phil Soc , vol.63 , pp. 1-149
    • Maglio, V.J.1
  • 2
    • 84985315975 scopus 로고
    • Hair structure of the wooly mammoth, Mammuthus primigenius and the modern elephants, Elephas maximus and Loxodonta africana
    • London
    • Valente A (1983) Hair structure of the wooly mammoth, Mammuthus primigenius and the modern elephants, Elephas maximus and Loxodonta africana. J Zool (London) 199: 271-274.
    • (1983) J Zool , vol.199 , pp. 271-274
    • Valente, A.1
  • 3
    • 0006366744 scopus 로고    scopus 로고
    • Elephantidae phylogeny: Morphological versus molecular results
    • Shoshani J, Golenberg EM, Yang H (1998) Elephantidae phylogeny: Morphological versus molecular results. Acta Theriol (Suppl 5): 89-122.
    • (1998) Acta Theriol , Issue.5 SUPPL. , pp. 89-122
    • Shoshani, J.1    Golenberg, E.M.2    Yang, H.3
  • 4
    • 0019446610 scopus 로고
    • Albumin systematics of the extinct mammoth and Tasmanian wolf
    • Lowenstein JM, Sarich VM, Richardson BJ (1981) Albumin systematics of the extinct mammoth and Tasmanian wolf. Nature 291: 409-411.
    • (1981) Nature , vol.291 , pp. 409-411
    • Lowenstein, J.M.1    Sarich, V.M.2    Richardson, B.J.3
  • 5
    • 0027498622 scopus 로고
    • Holocene dwarf mammoths from Wrangel Island in the Siberian Arctic
    • Vartanyan SL, Garutt VE, Sher AV (1993) Holocene dwarf mammoths from Wrangel Island in the Siberian Arctic. Nature 362: 337-340.
    • (1993) Nature , vol.362 , pp. 337-340
    • Vartanyan, S.L.1    Garutt, V.E.2    Sher, A.V.3
  • 6
    • 0029671438 scopus 로고    scopus 로고
    • Phylogenetic resolution within the Elephantidae using fossil DNA sequence from American mastodon (Mammut americanum) as an outgroup
    • USA
    • Yang H, Golenberg EM, Shoshani J (1996) Phylogenetic resolution within the Elephantidae using fossil DNA sequence from American mastodon (Mammut americanum) as an outgroup. Proc. Natl. Acad. Sci. USA 93: 1190-1194.
    • (1996) Proc. Natl. Acad. Sci. , vol.93 , pp. 1190-1194
    • Yang, H.1    Golenberg, E.M.2    Shoshani, J.3
  • 8
    • 0034704022 scopus 로고    scopus 로고
    • Molecular and morphological evidence on the phylogeny of the Elephantidae
    • Thomas MG, Hagelberg E, Jone HB, Yang Z, Lister AM (2000) Molecular and morphological evidence on the phylogeny of the Elephantidae. Proc Biol Sci 267: 2493-2500.
    • (2000) Proc Biol Sci , vol.267 , pp. 2493-2500
    • Thomas, M.G.1    Hagelberg, E.2    Jone, H.B.3    Yang, Z.4    Lister, A.M.5
  • 9
    • 0037353306 scopus 로고    scopus 로고
    • Mitochondrial cytochrome b of the Lyakhov mammoth (Proboscidea, Mammalia): New data and phylogenetic analyses of Elephantidae
    • Debruyne R, Barriel V, Tassy P (2003) Mitochondrial cytochrome b of the Lyakhov mammoth (Proboscidea, Mammalia): New data and phylogenetic analyses of Elephantidae. Mol Phylogenet Evol 26: 421-434.
    • (2003) Mol Phylogenet E , vol.26 , pp. 421-434
    • Debruyne, R.1    Barriel, V.2    Tassy, P.3
  • 11
    • 0000557216 scopus 로고    scopus 로고
    • Mitochondrial Cytochrome b sequence from a 33000 year-old woolly mammoth (Mammuthus primigenius)
    • Derenko M, Malyarchuk B, Shields GF (1997) Mitochondrial Cytochrome b sequence from a 33000 year-old woolly mammoth (Mammuthus primigenius). Anc Biomol 1: 149-153.
    • (1997) Anc Biomol , vol.1 , pp. 149-153
    • Derenko, M.1    Malyarchuk, B.2    Shields, G.F.3
  • 15
    • 0035581087 scopus 로고    scopus 로고
    • DNA sequences from multiple amplifications reveal artifacts induced by cytosine deamination in ancient DNA
    • Hofreiter M, Jaenicke V, Serre D, Haeseler AA, Paabo S (2001) DNA sequences from multiple amplifications reveal artifacts induced by cytosine deamination in ancient DNA. Nucleic Acids Res 29: 4793-4799.
    • (2001) Nucleic Acids Res , vol.29 , pp. 4793-4799
    • Hofreiter, M.1    Jaenicke, V.2    Serre, D.3    Haeseler, A.A.4    Paabo, S.5
  • 16
    • 0141498022 scopus 로고    scopus 로고
    • Afrotherian phylogeny as inferred from complete mitochondrial genomes
    • Murata Y, Nikaido M, Sasaki T, Cao Y, Fukumoto Y, et al. (2003) Afrotherian phylogeny as inferred from complete mitochondrial genomes. Mol Phylogenet Evol 28: 253-260.
    • (2003) Mol Phylogenet E , vol.28 , pp. 253-260
    • Murata, Y.1    Nikaido, M.2    Sasaki, T.3    Cao, Y.4    Fukumoto, Y.5
  • 17
    • 20144385989 scopus 로고    scopus 로고
    • A heuristic rate smoothing procedure for maximum likelihood estimation of species divergence times
    • Yang Z (2004) A heuristic rate smoothing procedure for maximum likelihood estimation of species divergence times. Acta Zoologica Sinica 50: 645-656.
    • (2004) Acta Zoologica Sinica , vol.50 , pp. 645-656
    • Yang, Z.1
  • 18
    • 0030894343 scopus 로고    scopus 로고
    • Phylogenetic position of mammoth and Steller's sea cow within Tethytheria demonstrated by mitochondrial DNA sequences
    • Ozawa T, Hayashi S, Mikhelson VM (1997) Phylogenetic position of mammoth and Steller's sea cow within Tethytheria demonstrated by mitochondrial DNA sequences. J Mol Evol 44: 406-413.
    • (1997) J Mol E , vol.44 , pp. 406-413
    • Ozawa, T.1    Hayashi, S.2    Mikhelson, V.M.3
  • 19
    • 0031910733 scopus 로고    scopus 로고
    • Molecular phylogenetic inference of the woolly mammoth Mammuthus primigenius, based on complete sequences of mitochondrial cytochrome b and 12S ribosomal RNA genes
    • Noro M, Masuda R, Dubrovo IA, Yoshida MC, Kato M (1998) Molecular phylogenetic inference of the woolly mammoth Mammuthus primigenius, based on complete sequences of mitochondrial cytochrome b and 12S ribosomal RNA genes. J Mol Evol 46: 314-326.
    • (1998) J Mol E , vol.46 , pp. 314-326
    • Noro, M.1    Masuda, R.2    Dubrovo, I.A.3    Yoshida, M.C.4    Kato, M.5
  • 20
    • 33644985289 scopus 로고    scopus 로고
    • Multiplex amplification of the mammoth mitochondrial genome and the evolution of Elephantidae
    • Epub ahead of print
    • Krause J, Dear PH, Pollack JL, Slatkin M, Spriggs H, et al. (2005) Multiplex amplification of the mammoth mitochondrial genome and the evolution of Elephantidae. Nature: Epub ahead of print.
    • (2005) Nature
    • Krause, J.1    Dear, P.H.2    Pollack, J.L.3    Slatkin, M.4    Spriggs, H.5
  • 21
    • 33644971279 scopus 로고    scopus 로고
    • Metagenomics to paleogenomics: Large-scale sequencing of mammoth DNA
    • Epub ahead of print
    • Poinar HN, Schwarz C, Qi J, Shapiro B, Macphee RD, et al. (2005) Metagenomics to paleogenomics: Large-scale sequencing of mammoth DNA. Science: Epub ahead of print.
    • (2005) Science
    • Poinar, H.N.1    Schwarz, C.2    Qi, J.3    Shapiro, B.4    Macphee, R.D.5
  • 22
    • 0035994566 scopus 로고    scopus 로고
    • Population structure of the African savannah elephant inferred from mitochondrial control region sequences and nuclear microsatellite loci
    • Nyakaana S, Arctander P, Siegismund HR (2002) Population structure of the African savannah elephant inferred from mitochondrial control region sequences and nuclear microsatellite loci. Heredity 89: 90-98.
    • (2002) Heredity , vol.89 , pp. 90-98
    • Nyakaana, S.1    Arctander, P.2    Siegismund, H.R.3
  • 23
    • 0034011230 scopus 로고    scopus 로고
    • Mitochondrial DNA variation, phylogeography and population structure of the Asian elephant
    • Fernando P, Pfrender M, Encalada S, Lande R (2000) Mitochondrial DNA variation, phylogeography and population structure of the Asian elephant. Heredity 84:: 362-372.
    • (2000) Heredity , vol.84 , pp. 362-372
    • Fernando, P.1    Pfrender, M.2    Encalada, S.3    Lande, R.4
  • 24
    • 11144265851 scopus 로고    scopus 로고
    • Population differentiation within and among Asian elephant (Elephas maximus) populations in southern India
    • Vidya TN, Fernando P, Melnick DJ, Sukumar R (2005) Population differentiation within and among Asian elephant (Elephas maximus) populations in southern India. Heredity 94: 71-80.
    • (2005) Heredity , vol.94 , pp. 71-80
    • Vidya, T.N.1    Fernando, P.2    Melnick, D.J.3    Sukumar, R.4
  • 25
    • 0035825652 scopus 로고    scopus 로고
    • Complete mitochondrial genome sequences of two extinct moas clarify ratite evolution
    • Cooper A, Lalueza-Fox C, Anderson S, Rambaut A, Austin J, et al. (2001) Complete mitochondrial genome sequences of two extinct moas clarify ratite evolution. Nature 409: 704-707.
    • (2001) Nature , vol.409 , pp. 704-707
    • Cooper, A.1    Lalueza-Fox, C.2    Anderson, S.3    Rambaut, A.4    Austin, J.5
  • 26
    • 11244270692 scopus 로고    scopus 로고
    • Cytonuclear genomic dissociation in African elephant species
    • Roca A, Georgiadis N, O'Brien S (2005) Cytonuclear genomic dissociation in African elephant species. Nat Genet 37: 96-100.
    • (2005) Nat Genet , vol.37 , pp. 96-100
    • Roca, A.1    Georgiadis, N.2    O'Brien, S.3
  • 27
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • Edgar RC (2004) MUSCLE: Multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32: 1792-1797.
    • (2004) Nucleic Acids Res , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 28
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment
    • Kumar S, Tamura K, Nei M (2004) MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment. Brief Bioinform 5: 150-163.
    • (2004) Brief Bioinform , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 29
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • Ronquist F, Huelsenbeck JP (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19: 1572-1574.
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 31
    • 4344648036 scopus 로고    scopus 로고
    • Bayesian inference of character evolution
    • Ronquist F (2004) Bayesian inference of character evolution. Trends Ecol Evol 19: 475-481.
    • (2004) Trends Ecol e , vol.19 , pp. 475-481
    • Ronquist, F.1
  • 32
    • 0030683599 scopus 로고    scopus 로고
    • PAML: A program package for phylogenetic analysis by maximum likelihood
    • Yang Z (1997) PAML: A program package for phylogenetic analysis by maximum likelihood. Comput Appl Biosci 13: 555-556.
    • (1997) Comput Appl Biosci , vol.13 , pp. 555-556
    • Yang, Z.1
  • 33
    • 0041125850 scopus 로고    scopus 로고
    • The complete mitochondrial genome sequence of the African elephant (Loxodonta africana), phylogenetic relationships of Proboscidea to other mammals and D-loop heteroplasmy
    • Hauf J, Waddell PJ, Chalwatzis N, Joger U, Zimmermann FK (2000) The complete mitochondrial genome sequence of the African elephant (Loxodonta africana), phylogenetic relationships of Proboscidea to other mammals and D-loop heteroplasmy. Zoology 102: 184-195.
    • (2000) Zoology , vol.102 , pp. 184-195
    • Hauf, J.1    Waddell, P.J.2    Chalwatzis, N.3    Joger, U.4    Zimmermann, F.K.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.