Microsecond time scale rotation measurements of single F1-ATPase molecules

Biochemistry

Volumn 45, Issue 10, 2006, Pages 3117-3124

  Spetzler, David ^a   York, Justin ^a   Daniel, Douglas ^a   Fromme, Raimund ^a   Lowry, David ^a   Frasch, Wayne ^a  

^a ARIZONA STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DIFFRACTION; DRAG; ESCHERICHIA COLI; NANOSTRUCTURED MATERIALS; POLARIZATION; SUBSTRATES; TORQUE;

ACQUISITION RATES; AXIS OF ROTATION; DWELL TIME; MICROSECOND TIME SCALE ROTATION MEASUREMENTS; PLANE OF POLARIZATION; TEMPORAL RESOLUTION; TRANSITION TIME;

ADENOSINETRIPHOSPHATE;

ADENOSINE TRIPHOSPHATASE (MAGNESIUM); ADENOSINE TRIPHOSPHATE; GOLD; PROTON TRANSPORTING ADENOSINE TRIPHOSPHATE SYNTHASE;

ACCURACY; ARTICLE; CONCENTRATION (PARAMETERS); DIFFRACTION; ENZYME ANALYSIS; ENZYME IMMOBILIZATION; ENZYME SUBSTRATE; ENZYME SUBUNIT; ESCHERICHIA COLI; HISTOGRAM; LIGHT SCATTERING; MEASUREMENT; NONHUMAN; POLARIZATION; PRIORITY JOURNAL; ROTATION; TECHNIQUE; TORQUE;

ADENOSINE TRIPHOSPHATE; PROTEIN CONFORMATION; PROTON-TRANSLOCATING ATPASES; ROTATION; TORQUE;

ESCHERICHIA COLI;

EID: 33644856865     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi052363n     Document Type: Article

References (30)

1. Kinosita, K., Jr., Adachi, K., and Itoh, H. (2004) Rotation of F1-ATPase: How an ATP-driven molecular machine may work, Annu. Rev. Biophys. Biomol. Struct. 33, 245-68.
2. Senior, A. E., and Weber, J. (2004) Happy motoring with ATP synthase, Nat. Struct. Mol. Biol. 11, 110-2.
3. Walker, J. E., Saraste, M., and Gay, N. J. (1982) Escherichia coli F1-Atpase Interacts with a Membrane-Protein Component of a Proton Channel, Nature 298, 867-9.
4. Boyer, P. D. (1997) The ATP synthase: A splendid molecular machine, Annu. Rev. Biochem. 66, 717-49.
5. Junge, W., Lill, H., and Engelbrecht, S. (1997) ATP synthase: An electrochemical transducer with rotatory mechanics, Trends Biochem. Sci. 22, 420-3.
6. Noji, H., Yasuda, R., Yoshida, M., and Kinosita, K., Jr. (1997) Direct observation of the rotation of F1-ATPase, Nature 386, 299-302.
7. Kinosita, K., Jr. (1999) Real time imaging of rotating molecular machines, FASEB J. 13 (Suppl. 2), S201-8.
8. Shimabukuro, K., Yasuda, R., Muneyuki, E., Hara, K. Y., Kinosita, K., Jr., and Yoshida, M. (2003) Catalysis and rotation of F1 motor: Cleavage of ATP at the catalytic site occurs in 1 ms before 40° substep rotation, Proc. Natl. Acad. Sci. U.S.A. 100, 14731-6.
9. Yoshida, M., Noji, H., and Muneyuki, E. (1997) [World smallest motor, ATP synthase], Tanpakushitsu Kakusan Koso 42, 1396-406.
10. Kinosita, K., Jr., Yasuda, R., Noji, H., and Adachi, K. (2000) A rotary molecular motor that can work at near 100% efficiency, Philos. Trans. R. Soc. London, Ser. B Biol. Sci. 355, 473-89.
11. Yoshida, M., Muneyuki, E., and Hisabori, T. (2001) ATP synthase: A marvellous rotary engine of the cell, Nat. Rev. Mol. Cell Biol. 2, 669-77.
12. Boyer, P. D., and Kohlbrenner, W. (1981) in Energy Coupling in Photosynthesis (Selman, S. S.-R., Ed.) pp 231-40, Elsevier, Amsterdam.
13. Duncan, T. M., Bulygin, V. V., Zhou, Y., Hutcheon, M. L., and Cross, R. L. (1995) Rotation of subunits during catalysis by Escherichia coli F1-ATPase, Proc. Natl. Acad. Sci. U.S.A. 92, 10964-8.
14. Sabbert, D., Engelbrecht, S., and Junge, W. (1996) Intersubunit rotation in active F-ATPase, Nature 381, 623-5.
15. Senior, A. E., Nadanaciva, S., and Weber, J. (2002) The molecular mechanism of ATP synthesis by F1F0-ATP synthase, Biochim. Biophys. Acta 1553, 188-211.
16. Panke, O., Cherepanov, D. A., Gumbiowski, K., Engelbrecht, S., and Junge, W. (2002) Viscoelastic dynamics of actin filaments coupled to rotary F-ATPase: Angular torque profile of the enzyme, Biophys. J. 83, 582.
17. Panke, O., Cherepanov, D. A., Gumbiowski, K., Engelbrecht, S., and Junge, W. (2001) Viscoelastic dynamics of actin filaments coupled to rotary F-ATPase: Angular torque profile of the enzyme, Biophys. J. 81, 1220-33.
18. Greene, M. D., and Frasch, W. D. (2003) Interactions among γR268, γQ269, and the β subunit catch loop of Escherichia coli F1-ATPase are important for catalytic activity, J. Biol. Chem. 278, 51594-8.
19. 0-ATP synthase, Biochemistry 44, 7275-81.
20. 0 ATP synthase. Biochemistry 44, 9497-506.
21. Jana, N. R., Gearheart, L., and Murphy, C. J. (2001) Wet Chemical Synthesis of high aspect ratio cylindrical gold nanorods, J. Phys. Chem. B 105, 4065-7.
22. Raschke, G., Kowarik, S., Franzl, T., Sonnichsen, C., Klar, T. A., Feldmann, J., Nichtl, A., and Kurzinger, K. (2003) Biomolecular recognition based on single gold nanoparticle light scattering, Nano Lett. 3, 935-8.
23. Moskovits, M. (1985) Surface-Enhanced Spectroscopy, Rev. Mod. Phys. 57, 783-826.
24. 1-ATPase, FEBS Lett. 504, 152-60.
25. Nakanishi-Matsui, M., Kashiwagi, S., Hosokawa, H., Cipriano, D. J., Dunn, S. D., Wada, Y., and Futai, M. (2005) Stochastic high-speed rotation of Escherichia coli ATP synthase F1 sector: The ε subunit-sensitive rotation, J. Biol. Chem. (in press).
26. Yasuda, R., Noji, H., Yoshida, M., Kinosita, K., and Itoh, H. (2001) Resolution of distinct rotational substeps by submillisecond kinetic analysis of F-1-ATPase, Nature 410, 898-904.
27. Panke, O., Gumbiowski, K., Junge, W., and Engelbrecht, S. (2000) F-ATPase: Specific observation of the rotating c subunit oligomer of EFoEF1, FEBS Lett. 472, 34-8.
28. Cheng, L., Fenter, P., Nagy, K. L., Schlegel, M. L., and Sturchio, N. C. (2001) Molecular-scale density oscillations in water adjacent to a mica surface, Phys. Rev. Lett. 87, 156103.
29. Zhu, Y. X., and Granick, S. (2001) Viscosity of interfacial water, Phys. Rev. Lett., 8709.
30. O'Neal, C. C., and Boyer, P. D. (1984) Assessment of the rate of bound substrate interconversion and of ATP acceleration of product release during catalysis by mitochondrial adenosine triphosphatase, J. Biol. Chem. 259, 5761-7.