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Volumn 17, Issue 2, 2006, Pages 137-148

Towards efficient isolation of R gene orthologs from multiple genotypes: Optimization of Long Range-PCR

Author keywords

Allelic mining; LR PCR; Potato; R genes; RB gene

Indexed keywords

CLONING; DNA SEQUENCES; POLYMERASE CHAIN REACTION; RECOVERY;

EID: 33644781963     PISSN: 13803743     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11032-005-4475-5     Document Type: Article
Times cited : (8)

References (38)
  • 1
    • 0028211009 scopus 로고
    • PCR amplification of up to 35-kb DNA with high fidelity and high yield from λ bacteriophage templates
    • W.M. Barnes 1994 PCR amplification of up to 35-kb DNA with high fidelity and high yield from λ bacteriophage templates Proc. Natl. Acad. Sci. USA 91 2216 2220
    • (1994) Proc. Natl. Acad. Sci. USA , vol.91 , pp. 2216-2220
    • Barnes, W.M.1
  • 2
    • 0035997795 scopus 로고    scopus 로고
    • Studies of genomes of dairy bacteria Lactococcus lactis
    • A. Bolotin S.D. Erhlich A. Sorokin 2002 Studies of genomes of dairy bacteria Lactococcus lactis Sci. Aliment. 22 44 53
    • (2002) Sci. Aliment. , vol.22 , pp. 44-53
    • Bolotin, A.1    Erhlich, S.D.2    Sorokin, A.3
  • 3
    • 0042330188 scopus 로고    scopus 로고
    • Concomitant reiterative BAC walking and fine genetic mapping enable physical map development for the broad-spectrum late blight resistance region, RB
    • J.M. Bradeen S.K. Naess J. Song G.T. Haberlach S.M. Wielgus C.R. Buell J. Jiang J.P. Helgeson 2003 Concomitant reiterative BAC walking and fine genetic mapping enable physical map development for the broad-spectrum late blight resistance region, RB Mol. Genet. Genomics 269 603 611
    • (2003) Mol. Genet. Genomics , vol.269 , pp. 603-611
    • Bradeen, J.M.1    Naess, S.K.2    Song, J.3    Haberlach, G.T.4    Wielgus, S.M.5    Buell, C.R.6    Jiang, J.7    Helgeson, J.P.8
  • 4
    • 10644287648 scopus 로고    scopus 로고
    • Heterogeneous evolutionary processes affect R gene diversity in natural populations of Solanum pimpinellifolium
    • A.L. Caicedo B.A. Schaal 2004 Heterogeneous evolutionary processes affect R gene diversity in natural populations of Solanum pimpinellifolium Proc. Natl. Acad. Sci. USA 101 17444 17449
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 17444-17449
    • Caicedo, A.L.1    Schaal, B.A.2
  • 5
    • 0028261194 scopus 로고
    • Effective amplification of long targets from cloned inserts and human genomic DNA
    • S. Cheng C. Fockler W.M. Barnes R. Higuchi 1994a Effective amplification of long targets from cloned inserts and human genomic DNA Proc. Natl. Acad. Sci. USA 91 5695 5699
    • (1994) Proc. Natl. Acad. Sci. USA , vol.91 , pp. 5695-5699
    • Cheng, S.1    Fockler, C.2    Barnes, W.M.3    Higuchi, R.4
  • 7
    • 0035859020 scopus 로고    scopus 로고
    • Plant pathogens and integrated defence responses to infection
    • J.L. Dangl J.D.G. Jones 2001 Plant pathogens and integrated defence responses to infection Nature 411 826 833
    • (2001) Nature , vol.411 , pp. 826-833
    • Dangl, J.L.1    Jones, J.D.G.2
  • 8
    • 0037560709 scopus 로고    scopus 로고
    • Direct haplotyping of long-range genomic DNA with M1-PCR
    • C. Ding C.R. Cantor 2003 Direct haplotyping of long-range genomic DNA with M1-PCR Proc. Natl. Acad. Sci. USA 100 7449 7453
    • (2003) Proc. Natl. Acad. Sci. USA , vol.100 , pp. 7449-7453
    • Ding, C.1    Cantor, C.R.2
  • 9
    • 85047682516 scopus 로고    scopus 로고
    • Sentinels of disease. Plant resistance genes
    • R. Fluhr 2001 Sentinels of disease. Plant resistance genes Plant Physiol. 127 1367 1374
    • (2001) Plant Physiol. , vol.127 , pp. 1367-1374
    • Fluhr, R.1
  • 10
    • 0030693871 scopus 로고    scopus 로고
    • Re-emergence of potato and tomato late blight in the United States
    • W.E. Fry S.B. Goodwin 1997 Re-emergence of potato and tomato late blight in the United States Plant Dis. 81 1349 1357
    • (1997) Plant Dis. , vol.81 , pp. 1349-1357
    • Fry, W.E.1    Goodwin, S.B.2
  • 11
    • 85183966166 scopus 로고    scopus 로고
    • GENSCAN CAChris BurgeStanford University.
    • GENSCAN http://genes.mit.edu/GENSCAN.html 2002. CAChris BurgeStanford University.
    • (2002)
  • 12
    • 1642356027 scopus 로고    scopus 로고
    • The PCR amplification and characterization of entire Pseudomonas syringae hrp/hrc clusters
    • S.J. Gropp D.S. Guttman 2004 The PCR amplification and characterization of entire Pseudomonas syringae hrp/hrc clusters Mol. Plant Pathol. 5 137 140
    • (2004) Mol. Plant Pathol. , vol.5 , pp. 137-140
    • Gropp, S.J.1    Guttman, D.S.2
  • 13
    • 0038404717 scopus 로고    scopus 로고
    • Deciphering plant-pathogen communication: Fresh perspectives for molecular resistance breeding
    • K.E. Hammond-Kosack J.E. Parker 2003 Deciphering plant-pathogen communication: fresh perspectives for molecular resistance breeding Curr. Opin. Biotech. 14 177 193
    • (2003) Curr. Opin. Biotech. , vol.14 , pp. 177-193
    • Hammond-Kosack, K.E.1    Parker, J.E.2
  • 15
    • 0001604154 scopus 로고
    • Double-bridge hybrids of Solanum bulbocastanum and cultivars of Solanum tuberosum
    • J.G.Th. Hermsen M.S. Ramanna 1973 Double-bridge hybrids of Solanum bulbocastanum and cultivars of Solanum tuberosum Euphytica 22 457 466
    • (1973) Euphytica , vol.22 , pp. 457-466
    • Hermsen, J.G.Th.1    Ramanna, M.S.2
  • 16
    • 0036693940 scopus 로고    scopus 로고
    • Long PCR-based amplification of the entire mitochondrial genome from single parasitic nematodes
    • M. Hu N.B. Chilton R.B. Gasser 2002 Long PCR-based amplification of the entire mitochondrial genome from single parasitic nematodes Mol. Cell. Probe 16 261 267
    • (2002) Mol. Cell. Probe , vol.16 , pp. 261-267
    • Hu, M.1    Chilton, N.B.2    Gasser, R.B.3
  • 18
    • 0002487324 scopus 로고    scopus 로고
    • Breeding for disease resistance in potato
    • S. Jansky 2000 Breeding for disease resistance in potato Plant Breeding Rev. 19 69 155
    • (2000) Plant Breeding Rev. , vol.19 , pp. 69-155
    • Jansky, S.1
  • 19
    • 0034933304 scopus 로고    scopus 로고
    • Nonhost resistant to Phytophthora: Novel prospects for a classical problem
    • S. Kamoun 2001 Nonhost resistant to Phytophthora: novel prospects for a classical problem Curr. Opin. Plant Biol. 4 295 300
    • (2001) Curr. Opin. Plant Biol. , vol.4 , pp. 295-300
    • Kamoun, S.1
  • 20
    • 0032031034 scopus 로고    scopus 로고
    • Rapid confirmation of gene targeting in embryonic stem cells using two long-range PCR techniques
    • J.M. Lay L. Friis-Hansen P.J. Gillespie L.C. Samuelson 1998 Rapid confirmation of gene targeting in embryonic stem cells using two long-range PCR techniques Transgenic Res. 7 135 140
    • (1998) Transgenic Res. , vol.7 , pp. 135-140
    • Lay, J.M.1    Friis-Hansen, L.2    Gillespie, P.J.3    Samuelson, L.C.4
  • 21
    • 0033844893 scopus 로고    scopus 로고
    • S1 analysis of long PCR heteroduplexes: Detection of chloroplast indel polymorphisms in Fragaria
    • J. Lin T.M. Davis 2000 S1 analysis of long PCR heteroduplexes: detection of chloroplast indel polymorphisms in Fragaria Theor. Appl. Genet. 101 415 420
    • (2000) Theor. Appl. Genet. , vol.101 , pp. 415-420
    • Lin, J.1    Davis, T.M.2
  • 22
    • 0142057020 scopus 로고    scopus 로고
    • Understanding the functions of plant disease resistance proteins
    • G.B. Martin A.J. Bogdanove G. Sessa 2003 Understanding the functions of plant disease resistance proteins Annu. Rev. Plant Biol. 54 23 61
    • (2003) Annu. Rev. Plant Biol. , vol.54 , pp. 23-61
    • Martin, G.B.1    Bogdanove, A.J.2    Sessa, G.3
  • 24
    • 0034468325 scopus 로고    scopus 로고
    • Structural analysis of transgene rearrangements and effects on expression in transgenic maize plants generated by particle bombardment
    • L. Mehlo G. Mazithulela R.M. Twyman M.I. Boulton J.W. Davies P. Christou 2000 Structural analysis of transgene rearrangements and effects on expression in transgenic maize plants generated by particle bombardment Maydica 45 277 287
    • (2000) Maydica , vol.45 , pp. 277-287
    • Mehlo, L.1    Mazithulela, G.2    Twyman, R.M.3    Boulton, M.I.4    Davies, J.W.5    Christou, P.6
  • 26
    • 51249162609 scopus 로고
    • Cloning Genomic Sequences using Long-Range PCR
    • J. Mundy R. Mayer N.-H. Chua 1995 Cloning Genomic Sequences using Long-Range PCR Plant Mol. Biol. Rep. 13 156 163
    • (1995) Plant Mol. Biol. Rep. , vol.13 , pp. 156-163
    • Mundy, J.1    Mayer, R.2    Chua, N.-H.3
  • 27
    • 0019321718 scopus 로고
    • Rapid isolation of high-molecular-weight plant DNA
    • M. Murray W. Thompson 1980 Rapid isolation of high-molecular-weight plant DNA Nucleic Acids Res. 8 4321 4325
    • (1980) Nucleic Acids Res. , vol.8 , pp. 4321-4325
    • Murray, M.1    Thompson, W.2
  • 29
    • 0037474068 scopus 로고    scopus 로고
    • Allele-specific long-range PCR/sequencing method for allelic assignment of multiple single nucleotide polymorphisms
    • M. Nagano T. Nakamura S. Ozawa K. Maekawa Y. Saito J-I. Sawada 2003 Allele-specific long-range PCR/sequencing method for allelic assignment of multiple single nucleotide polymorphisms J. Biochem. Biophys. Methods 55 1 9
    • (2003) J. Biochem. Biophys. Methods , vol.55 , pp. 1-9
    • Nagano, M.1    Nakamura, T.2    Ozawa, S.3    Maekawa, K.4    Saito, Y.5    Sawada, J.-I.6
  • 30
    • 0004524029 scopus 로고
    • Resistance of Solanum species to Phytophthora infestans in Mexico
    • J.S. Neiderhauser W.R. Mills 1953 Resistance of Solanum species to Phytophthora infestans in Mexico Phytopathology 43 456 457
    • (1953) Phytopathology , vol.43 , pp. 456-457
    • Neiderhauser, J.S.1    Mills, W.R.2
  • 31
    • 4344652284 scopus 로고    scopus 로고
    • Long-Range (17.7 kb) allele-specific polymerase chain reaction method for direct haplotyping of R117H and IVS-8 mutations of the cystic fibrosis transmembrane regulator gene
    • G. Pont-Kingdon M. Jama C. Miller A. Millson E. Lyon 2004 Long-Range (17.7 kb) allele-specific polymerase chain reaction method for direct haplotyping of R117H and IVS-8 mutations of the cystic fibrosis transmembrane regulator gene J. Mol. Diagn. 6 264 270
    • (2004) J. Mol. Diagn. , vol.6 , pp. 264-270
    • Pont-Kingdon, G.1    Jama, M.2    Miller, C.3    Millson, A.4    Lyon, E.5
  • 35
    • 9144231283 scopus 로고    scopus 로고
    • An ancient R gene from the wild potato species Solanum bulbocastanum confers broad-spectrum resistance to Phytophthora infestans in cultivated potato and tomato
    • E. van der Vossen A. Sikkema B.te L. Hekkert J. Gros P. Stevens M. Muskens D. Wouters A. Pereira W. Stiekema S. Allefs 2003 An ancient R gene from the wild potato species Solanum bulbocastanum confers broad-spectrum resistance to Phytophthora infestans in cultivated potato and tomato Plant J. 36 867 882
    • (2003) Plant J. , vol.36 , pp. 867-882
    • Van Der Vossen, E.1    Sikkema, A.2    Hekkert B.te, L.3    Gros, J.4    Stevens, P.5    Muskens, M.6    Wouters, D.7    Pereira, A.8    Stiekema, W.9    Allefs, S.10
  • 36
    • 0036121653 scopus 로고    scopus 로고
    • Heterogeneous plastid genomes in anther culture-derived albino rice plants
    • M. Yamagishi 2002 Heterogeneous plastid genomes in anther culture-derived albino rice plants Euphytica 123 67 74
    • (2002) Euphytica , vol.123 , pp. 67-74
    • Yamagishi, M.1
  • 37
    • 3843140614 scopus 로고    scopus 로고
    • ADLAPH: A molecular haplotyping method based on allele-discriminating long-range PCR
    • C.-E. Yu B. Devlin N. Galloway E. Loomis G.D. Schellenberg 2004 ADLAPH: a molecular haplotyping method based on allele-discriminating long-range PCR Genomics 84 600 612
    • (2004) Genomics , vol.84 , pp. 600-612
    • Yu, C.-E.1    Devlin, B.2    Galloway, N.3    Loomis, E.4    Schellenberg, G.D.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.