메뉴 건너뛰기




Volumn 7, Issue , 2006, Pages

An improved procedure for gene selection from microarray experiments using false discovery rate criterion

Author keywords

[No Author keywords available]

Indexed keywords

DIFFERENTIAL EXPRESSIONS; DIFFERENTIALLY EXPRESSED GENE; FALSE DISCOVERY RATE; GENE SELECTION; MICROARRAY EXPERIMENTS; SIMULATION STUDIES; STATISTICAL LITERATURE; TEST FUNCTIONS;

EID: 33644769300     PISSN: 14712105     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-7-15     Document Type: Article
Times cited : (15)

References (24)
  • 1
    • 0004156776 scopus 로고
    • Resampling-based multiple testing
    • New York: John Wiley & Sons
    • Westfall PH, Young SS: Resampling-based multiple testing New York: John Wiley & Sons; 1993.
    • (1993)
    • Westfall, P.H.1    Young, S.S.2
  • 2
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: A Practical and powerful approach to multiple testing
    • Benjamini Y, Hochberg Y: Controlling the false discovery rate: A Practical and powerful approach to multiple testing. JRSSB 1995, 57:289-300.
    • (1995) JRSSB , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 3
    • 0035733108 scopus 로고    scopus 로고
    • The control of the false discovery rate in multiple testing under dependency
    • Benjamini Y, Hochberg Y: The control of the false discovery rate in multiple testing under dependency. Annals of Statistics 2001:1165-1188.
    • (2001) Annals of Statistics , pp. 1165-1188
    • Benjamini, Y.1    Hochberg, Y.2
  • 4
    • 67649345185 scopus 로고
    • An improved Bonferroni procedure for multiple test of significance
    • Simes RJ: An improved Bonferroni procedure for multiple test of significance. Biometrika 1986, 73.
    • (1986) Biometrika , vol.73
    • Simes, R.J.1
  • 5
    • 0034370950 scopus 로고    scopus 로고
    • On the adaptive control of the false discovery rate in multiple testing with independent statistics
    • Benjamini Y, Hochberg Y: On the adaptive control of the false discovery rate in multiple testing with independent statistics. Journal of Education and Behavioral Statistics 2000, 25:60-83.
    • (2000) Journal of Education and Behavioral Statistics , vol.25 , pp. 60-83
    • Benjamini, Y.1    Hochberg, Y.2
  • 6
    • 0042424602 scopus 로고    scopus 로고
    • Statistical significance for genomewide studies
    • Storey JD, Tibshirani R: Statistical significance for genomewide studies. PNAS 2003, 100:9440-9445.
    • (2003) PNAS , vol.100 , pp. 9440-9445
    • Storey, J.D.1    Tibshirani, R.2
  • 7
    • 0037433040 scopus 로고    scopus 로고
    • Identifying differentially expressed genes using false discovery rate controlling procedures
    • Reiner & Yekutieli D, Benjamini Y: Identifying differentially expressed genes using false discovery rate controlling procedures. Bioinformatics 2003, 19:368-375.
    • (2003) Bioinformatics , vol.19 , pp. 368-375
    • Reiner, A.1    Yekutieli, D.2    Benjamini, Y.3
  • 9
    • 0035942271 scopus 로고    scopus 로고
    • Significance analysis of microarrays applied to the ionizing radiation response
    • Tusher VG, Tibshirani R, Chu G: Significance analysis of microarrays applied to the ionizing radiation response. PNAS 2001, 98:5116-5121.
    • (2001) PNAS , vol.98 , pp. 5116-5121
    • Tusher, V.G.1    Tibshirani, R.2    Chu, G.3
  • 11
    • 1842535253 scopus 로고    scopus 로고
    • Microarray experimental design: Power and samples size considerations
    • Yang MCK, Yang JJ, McIndoe PA She JX: Microarray experimental design: power and samples size considerations. Physiol Genomics 2003, 16:24-28.
    • (2003) Physiol Genomics , vol.16 , pp. 24-28
    • Yang, M.C.K.1    Yang, J.J.2    McIndoe, P.A.3    She, J.X.4
  • 13
    • 0003670427 scopus 로고    scopus 로고
    • Estimating false discovery rates under dependence, with applications to DNA microarrays
    • Technical report; Department of Statistics, Stanford University
    • Storey JD, Tibshirani R: Estimating false discovery rates under dependence, with applications to DNA microarrays. Technical report; Department of Statistics, Stanford University 2001.
    • (2001)
    • Storey, J.D.1    Tibshirani, R.2
  • 14
    • 0003625199 scopus 로고    scopus 로고
    • Microarrays, Empirical Bayes Methods, and False Discovery Rates
    • Technical Report 217, Department of Statistics, Stanford University
    • Efron B, Storey JD, Tibshirani R: Microarrays, Empirical Bayes Methods, and False Discovery Rates. Technical Report 217, Department of Statistics, Stanford University 2001.
    • (2001)
    • Efron, B.1    Storey, J.D.2    Tibshirani, R.3
  • 15
    • 84947406243 scopus 로고
    • Combining independent tests of significance
    • Birnbaum A: Combining independent tests of significance. JASA 1954, 49:559-574.
    • (1954) JASA , vol.49 , pp. 559-574
    • Birnbaum, A.1
  • 16
    • 70350345844 scopus 로고
    • Combination of independent test
    • Edited by: Krishnaiah PR, Sen PK. New York: Elsevier Science Publishers
    • Folks JL: Combination of independent test. Handbook of Statistics Volume 4. Edited by. Krishnaiah PR, Sen PK. New York: Elsevier Science Publishers; 1984:113-121.
    • (1984) Handbook of Statistics , vol.4 , pp. 113-121
    • Folks, J.L.1
  • 17
    • 84874654555 scopus 로고    scopus 로고
    • Global-p website
    • Global-p website [http//www.stat.ufl.edu/~jyang/globa1 p/global.p.R]
  • 18
    • 25444452877 scopus 로고    scopus 로고
    • A comparative review of estimates of the proportion unchanged genes and the false discovery rate
    • Broberg P: A comparative review of estimates of the proportion unchanged genes and the false discovery rate. BMC Bioinformatics 2005, 6(199):.
    • (2005) BMC Bioinformatics , vol.6 , Issue.199
    • Broberg, P.1
  • 19
    • 84907095419 scopus 로고    scopus 로고
    • R: A language and environment for statistical computing
    • R Development Core Team: Vienna, Austria ISBN 3-900051-07-0
    • R Development Core Team: R. A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria 2005 [http;//www.R-projec.org]. ISBN 3-900051-07-0
    • (2005) R Foundation for Statistical Computing
  • 21
    • 0036020892 scopus 로고    scopus 로고
    • A direct approach to false discovery rates
    • Storey JD: A direct approach to false discovery rates. JRSSB 2002, 64:479-498.
    • (2002) JRSSB , vol.64 , pp. 479-498
    • Storey, J.D.1
  • 22
    • 10844286757 scopus 로고    scopus 로고
    • A stochastic process approach to false discovery control
    • Genovese C, Wasserman L: A stochastic process approach to false discovery control. The Annals of Statistics 2004, 32:1035-1061.
    • (2004) The Annals of Statistics , vol.32 , pp. 1035-1061
    • Genovese, C.1    Wasserman, L.2
  • 23
    • 0001691818 scopus 로고
    • On the behavior of randomization tests without a group invariance assumption
    • Romano JH: On the behavior of randomization tests without a group invariance assumption. Journal of the American Statistical Association 1990, 85:
    • (1990) Journal of the American Statistical Association , vol.85
    • Romano, J.H.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.