Development of an isolate-specific marker for tracking Phaeomoniella chlamydospora infection in grapevines

Mycologia

Volumn 97, Issue 5, 2005, Pages 1093-1101

  Ridgway, Hayley J ^a   Steyaert, Johanna M ^a   Pottinger, Brenda M ^a   Carpenter, Margaret ^a   Nicol, David ^a   Stewart, Alison ^a  

^a LINCOLN UNIVERSITY   (New Zealand)

Author keywords

Monooxygenase; Petri disease; Vitis vinifera

Indexed keywords

ENDODEOXYRIBONUCLEASE BSRI; FUNGAL DNA; FUNGAL PROTEIN; MOXY PROTEIN, ASPERGILLUS PARASITICUS; OXYGENASE; TYPE II SITE SPECIFIC DEOXYRIBONUCLEASE;

EPIDEMIOLOGY; FUNGAL DISEASE; GENETIC MARKER;

AGAR GEL ELECTROPHORESIS; AMINO ACID SEQUENCE; ARTICLE; ASCOMYCETES; BACTERIAL SPORE; CHEMISTRY; DNA SEQUENCE; GENETIC MARKER; GENETIC POLYMORPHISM; GENETICS; GRAPE; ISOLATION AND PURIFICATION; METABOLISM; MICROBIOLOGY; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PLANT DISEASE; POLYMERASE CHAIN REACTION; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; SENSITIVITY AND SPECIFICITY; SEQUENCE HOMOLOGY; SINGLE NUCLEOTIDE POLYMORPHISM;

AMINO ACID SEQUENCE; ASCOMYCOTA; DEOXYRIBONUCLEASES, TYPE II SITE-SPECIFIC; DNA, FUNGAL; ELECTROPHORESIS, AGAR GEL; FUNGAL PROTEINS; GENETIC MARKERS; MOLECULAR SEQUENCE DATA; OXYGENASES; PLANT DISEASES; POLYMERASE CHAIN REACTION; POLYMORPHISM, GENETIC; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; POLYMORPHISM, SINGLE NUCLEOTIDE; SENSITIVITY AND SPECIFICITY; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, AMINO ACID; SOIL MICROBIOLOGY; SPORES; VITIS;

ASPERGILLUS PARASITICUS; BACTERIA (MICROORGANISMS); PHAEOMONIELLA CHLAMYDOSPORA; VITIS; VITIS SP.; VITIS VINIFERA;

EID: 33644767008     PISSN: 00275514     EISSN: 00275514     Source Type: Journal    
DOI: 10.3852/mycologia.97.5.1093     Document Type: Article

References (22)

1. Bertelli E, Mugnai L, Surico G. 1998. Presence of Phaeoacremonium chlamydospora in apparently healthy root grapevine cuttings. Phytopath Mediterrane 37:79-82.
2. Bulat SA, Lubeck M, Alekhina IA, Jensen DF, Knudsen IMB, Lubeck PS. 2000. Identification of a universally primed-PCR-derived sequence-characterized amplified region marker for an antagonistic strain of Clonostachys rosea and development of a strain-specific PCR detection assay. Appl Environ Microbiol 66:4758-4763.
3. Crous PW, Gams W. 2000. Phaeomoniella chlamydospora gen. et comb. nov., a causal organism of Petri grapevine decline and esca. Phytopath Mediterrane 39:112-118.
4. Dupont J, Laloui W, Roquebert MF. 1998. Partial ribosomal DNA sequences show an important divergence between Phaeoacremonium species isolated from Vitis vinifera. Mycol Res 102:631-637.
5. Ferreira JHS, van Wyk PS, Venter E. 1994. Slow dieback of grapevines: association of Phialophora parasitica with slow dieback of grapevines. SA J Enology Viticult 20:43-46.
6. Goldstein AL, Carpenter MA, Crowhurst RN, Stewart A. 2000. Identification of Coniothyrium minitans isolates using PCR amplification of a dispersed repetitive element. Mycologia 92:46-53.
7. Larignon P. 1999. Esca disease from a European perspective. In: Morton L, ed. Black Goo: symptoms and occurrence of grape declines. IAS/ICGTD Proceedings. Virginia, USA: International Ampelography Society. p 43-55.
8. Manzanares-Dauleux MJ, Barret P, Thomas G. 2000. Development of a pathotype specific SCAR marker in Plasmodiophora brassicae. Eur J Plant Pathol 106:781-787.
9. Morton L. 1997. Update on "Black goo." Wines and Vines 78:62-64.
10. Mugnai L, Graniti A, Surico G. 1999. Esca (black measles) and brown wood-streaking: two old and elusive diseases of grapevines. Plant Dis 83:404-418.
11. Ochman H, Nedhora MM, Garza D, Hartl DL. 1990. Amplification of flanking sequences by inverse PCR. In: Innis MAS, Gelfand DH, Sninsky J J, White TJ, eds. PCR protocols: A guide to methods and applications. San Diego: Academic Press. p 219-227.
12. Pascoe I, Cottral E. 2000. Developments in grapevine truck diseases research in Australia. Phytopath Mediterrane 39:68-75.
13. Pottinger B, Stewart A, Carpenter M, Ridgway HJ. 2002. Low genetic variation detected in New Zealand populations of Phaeomoniella chlamydospora. Phytopath Mediterrane 41:199-211.
14. Ridgway HJ, Sleight BE, Stewart A. 2002. Molecular evidence for the presence of Phaeomoniella chlamydospora in New Zealand vineyards and its detection in grapevine wood using species specific PCR. Australasian Plant Path 31:267-271.
15. _, Stewart A. 2000. Molecular marker assisted detection of the mycoparasite Coniothyrium minitans A69 in soil. NZ Plant Protect 53:114-117.
16. Sheck HJ, Vasquez SJ, Gubler WD. 1998. First report of three Phaeoacremonium spp. causing young grapevine decline in California. Plant Dis 82:590.
17. Sidoti A, Buonocore E, Serges T, Mugnai L. 2000. Decline of young grapevines associated with Phaeoacremonium chlamydosporum in Sicily (Italy). Phytopath Mediterrane 39(1):87-91.
18. Sparapano L, Bruno G, Graniti A. 2000. Effects on plants of metabolites produced in culture by Phaeoacremonium chlamydsoporum, P. aleophilum and Fomitiporia punctata. Phytopath Mediterrane 39:169-177.
19. Tabacchi R, Fykerat A, Poliart C, Dubin G. 2000. Phytotoxins from fungi of esca of grapevine. Phytopath Mediterrane 39:156-161.
20. Tegli S. 2000. A hypothesis about the reproductive modes of Phaeoacremonium aleophilum and Phaeomoniella chlamydospora. Phytopath Mediterrane 39:289-298.
21. Whiteman SA, Jaspers MV, Stewart A, Ridgway HJ. 2002. Detection of Phaeomoniella chlamydospora in soil using species specific PCR. NZ Plant Protect 55:139-145.
22. Yu J, Chang P, Cary JW, Wright M, Bhatnagar D, Cleveland TE, Payne GA, Linz JE. 1995. Comparative mapping of aflatoxin pathway gene clusters in Aspergillus parasiticus and Aspergillus flavus. Applied Environ Microbiol 61:2365-2371.