Comparative nucleotide sequence analysis of the phosphoprotein gene of peste des petits ruminants vaccine virus of Indian origin

Research in Veterinary Science

Volumn 81, Issue 1, 2006, Pages 158-164

  Muthuchelvan, D ^a   Sanyal, A ^b   Sarkar, J ^c   Sreenivasa, B P ^c   Bandyopadhyay, S K ^d  

^a CENTRAL INSTITUTE OF FISHERIES TECHNOLOGY   (India)

^b Indian Veterinary Research Institute ^*  (India)

^c INDIAN VETERINARY RESEARCH INSTITUTE   (India)

^d Animal Husbandry Commissioner   (India)

Author keywords

Amino acid sequence; Morbillivirus; Nucleotide sequence; Peste des petits ruminants virus; Phosphoprotein gene; Vaccine virus

Indexed keywords

ADENINE NUCLEOTIDE; GUANINE NUCLEOTIDE; MESSENGER RNA; PROTEIN C; PYRIMIDINE NUCLEOTIDE; TRINUCLEOTIDE; VIRUS PHOSPHOPROTEIN; VIRUS VACCINE;

AMINO ACID SEQUENCE; ARTICLE; ASIAN; COMPARATIVE STUDY; CONTROLLED STUDY; DRUG FORMULATION; GENETIC CODE; GENETIC CONSERVATION; INDIA; MEASLES VIRUS; NONHUMAN; NUCLEOTIDE SEQUENCE; PROTEIN STRUCTURE; RNA EDITING; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY; STRAIN DIFFERENCE; VIRUS ISOLATION; VIRUS STRAIN; WILD TYPE;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; CERCOPITHECUS AETHIOPS; INDIA; MOLECULAR SEQUENCE DATA; PESTE-DES-PETITS-RUMINANTS VIRUS; PHOSPHOPROTEINS; POLYMERASE CHAIN REACTION; VERO CELLS; VIRAL PROTEINS;

MEASLES VIRUS; MORBILLIVIRUS; PESTE-DES-PETITS-RUMINANTS VIRUS;

EID: 33644637814     PISSN: 00345288     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.rvsc.2005.09.001     Document Type: Article

References (31)

1. M.D. Baron M.S. Shaila T. Barrett Cloning and sequence analysis of the phosphoprotein gene of rinderpest virus J. Gen. Virol. 74 1993 299-304
2. T. Barrett S.B. Shrimpton S.E. Russell Nucleotide sequence of the entire protein coding region of canine distemper virus polymerase-associated (P) protein mRNA Virus Res. 3 1985 367-372
3. T. Barrett C. Amarel-Doel R.P. Kitching A. Gusev Use of the polymerase chain reaction in differentiating rinderpest field virus and vaccine virus in the same animals Rev. Sci. Technol. 12 1993 865-872
4. T. Barrett I.K. Visser L. Mamaev L. Goatley M.F. Van Bressem A.D. Osterhaust Dolphin and porpoise morbilliviruses are genetically distinct from phocine distemper virus Virology 193 1993 1010-1012
5. M. Blixenkrone-Moller B. Sharma T.M. Varsanyi A. Hu E. Norrby J. Kovamees Sequence analysis of the genes encoding the nucleocapsid protein and phosphoprotein (P) of phocid distemper virus and editing of the P gene transcript J. Gen. Virol. 73 1992 885-893
6. N. Blom S. Gammeltoft S. Brunak Sequence- and structure-based prediction of eukaryotic protein phosphorylation sites J. Mol. Biol. 294 1999 1351-1362
7. G. Bolt S. Alexandersen M. Blixenkrone-Moller The phosphoprotein gene of a dolphin morbillivirus isolate exhibits genomic variation at the editing site J. Gen. Virol. 76 1995 3051-3058
8. S. Byrappa D.D. Hendricks Y.-B. Pan J.M. Seyer K.C. Gupta Intracellular phosphorylation of the Sendai virus P protein Virology 208 1995 408-413
9. R. Cattaneo A. Schmid P. Spielhofer K. Kaelin K. Baczko V. Ter Meulen J. Pardowitz S. Flanagan B.K. Rima S.A. Udem M.A. Billeter Mutated and hypermutated genes of persistent measles viruses which caused lethal human brain diseases Virology 173 1989 415-425
10. P. Chomczynski N. Sacchi Single step method of RNA isolation by acid guanidium thiocyanate-phenol-chloroform extraction Anal. Biochem. 162 1987 56-159
11. M.D. Curran B.K. Rima The genes encoding the phospho- and matrix proteins of phocine distemper virus J. Gen. Virol. 73 1992 1587-1591
12. P. Dhar B.P. Sreenivasa T. Barrett M. Corteyn R.P. Singh S.K. Bandyopadhyay Recent epidemiology of peste des petits ruminants virus (PPRV) Vet. Microbiol. 88 2002 153-159
13. A. Diallo T. Barrett P.C. Lefevre W.P. Taylor Comparison of proteins induced in cells infected with rinderpest and peste des petits ruminants viruses J. Gen. Virol. 68 1987 2033-2038
14. A. Diallo T. Barrett M. Barbron G. Meyer P.C. Lefevre Cloning of the nucleocapsid protein gene of peste-des-petits-ruminants virus: relationship to other morbilliviruses J. Gen. Virol. 75 1994 233-237
15. J. Felsenstein Confidence limits on phylogenies: An approach using bootstrap Evolution 39 1985 783-791
16. M. Forsyth T. Barrett Detection and differentiation of rinderpest and peste des petits ruminants viruses in diagnostic and experimental samples by polymerase chain reaction using P and F gene-specific primers Virus Res. 39 1995 151-163
17. L. Haas M.D. Baron B. Leiss T. Barrett Editing of morbillivirus P gene transcripts in infected animals Vet. Microbiol. 44 1995 299-306
18. A. Haffar G. Libeau A. Moussa M. Cecile A. Diallo The matrix protein gene sequence analysis reveals close relationship between peste des petits ruminants virus (PPRV) and dolphin morbillivirus Virus Res. 64 1999 69-75
19. S.B. Hedges The number of replications needed for accurate estimation of the bootstrap P value in phylogenetic studies Mol. Biol. Evol. 9 1992 366-369
20. C.-J. Hu K.C. Gupta Functional significance of alternate phosphorylation in Sendai Virus P protein Virology 268 2000 517-532
21. C.-J. Hu A. Kato M.C. Bowman K. Kiyotani T. Yoshida S.A. Moyer Y. Nagai K.C. Gupta Role of primary constitutive phosphorylation of Sendai Virus P and V proteins in viral replication and pathogenesis Virology 263 1999 195-208
22. S. Kumar K. Tamura I.B. Jakobsen M. Nei MEGA2: Molecular Evolutionary Genetics Analysis Software 2001 Arizona State University Tempe, AZ, USA
23. R.A. Lamb D. Kolakofsky Paramyxoviridae: The viruses and their replication D.M. Knipe P.M. Howley Fields Virology third ed. 2001 Lippincott Williams and Wilkins Philadelphia 1305-1340
24. D.P. Locke H.S. Sellers J.M. Crawford S. Schultz-Cherry D.J. King R.J. Meinersmann B.S. Seal Newcastle disease virus phosphoprotein gene analysis and transcriptional editing in avian cells Virus Res. 69 2000 55-68
25. M. Mahapatra S. Parida B.G. Egziabher A. Diallo T. Barrett Sequence analysis of the phosphoprotein gene of peste des petits ruminants (PPR) virus: Editing of the gene transcript Virus Res. 96 2003 85-98
26. Y.P. Nanda A. Chatterjee A.K. Purohit A. Diallo K. Innui R.N. Sharma G. Libeau J.A. Thevasagayam A. Bruning R.P. Kiching J. Anderson T. Barrett W.P. Taylor The isolation of peste des petits ruminants virus from Northern India Vet. Microbiol. 51 1996 207-216
27. J. Sarkar B.P. Sreenivasa R.P. Singh P. Dhar S.K. Bandyopadhyay Comparative efficacy of various chemical stabilizers on the thermostability of a live-attenuated peste des petits ruminants (PPR) vaccine Vaccine 21 2003 4728-4735
28. M.S. Shaila D. Shamaki M.A. Forsyth A. Diallo L. Goatley R.P. Kitching T. Barrett Geographic distribution of peste des petits ruminants viruses Virus Res. 43 1996 149-153
29. B.J. Shiell D.R. Gardner G. Crameri B.T. Eaton W.P. Michalski Sites of phosphorylation of P and V proteins from Hendra and Nipah viruses: Newly emerged members of Paramyxoviridae Virus Res. 92 2003 55-65
30. R.P. Singh B.P. Sreenivasa P. Dhar L.C. Shah S.K. Bandyopadhyay Development of a monoclonal antibody based competitive-ELISA for detection and titration of antibodies to peste des petits ruminants (PPR) virus Vet. Microbiol. 98 2004 3-15
31. C. Stem An economic analysis of the prevention of peste des petits ruminants in Nigerian goats Prev. Vet. Med. 16 1993 141-150