Databases for knowledge discovery: Examples from biomedicine and health care

International Journal of Medical Informatics

Volumn 75, Issue 3-4 SPEC. ISS., 2006, Pages 257-267

  Van Bemmel, Jan H ^a   Van Mulligen, Erik M ^a   Mons, Barend ^a   Van Wijk, Marc ^a   Kors, Jan A ^a   Van Der Lei, Johan ^a  

^a ERASMUS MEDICAL CENTER   (Netherlands)

Author keywords

Biomedical literature; Biomedical research; Clinical research; Critiquing; Decision support; Epidemiology; Fingerprints; Genetics; Knowledge discovery; Population bases research; Primary care

Indexed keywords

BIOMEDICAL ENGINEERING; DATABASE SYSTEMS; DECISION SUPPORT SYSTEMS; EPIDEMIOLOGY; GENETIC ENGINEERING; HEALTH CARE;

BIOMEDICAL LITERATURE; BIOMEDICAL RESEARCH; CLINICAL RESEARCH; CRITIQUING; FINGERPRINTS; GENETICS; KNOWLEDGE DISCOVERY; POPULATION-BASES RESEARCH; PRIMARY CARE;

KNOWLEDGE ENGINEERING;

BIOMEDICINE; CLINICAL RESEARCH; CONFERENCE PAPER; DATA BASE; DECISION SUPPORT SYSTEM; ELECTRONIC MEDICAL RECORD; ENGINEERING; HEALTH CARE; HUMAN; HUMANITIES; KNOWLEDGE; MATHEMATICS; MEDICAL INFORMATICS; MEDICAL RESEARCH; PHYSICS; POPULATION RESEARCH; PRACTICE GUIDELINE; PRIORITY JOURNAL; PSYCHOLOGY; SOCIOLOGY;

BIOMEDICAL RESEARCH; DATABASE MANAGEMENT SYSTEMS; DATABASES, FACTUAL; DELIVERY OF HEALTH CARE; EUROPE; HEALTH KNOWLEDGE, ATTITUDES, PRACTICE; INFORMATION STORAGE AND RETRIEVAL; MEDICAL RECORDS SYSTEMS, COMPUTERIZED; RESEARCH;

EID: 33644500818     PISSN: 13865056     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ijmedinf.2005.08.012     Document Type: Conference Paper

References (27)

1. J.H. Van Bemmel, and M.A. Musen Handbook of Medical Informatics 1997 Springer Verlag Heidelberg, New York
2. S.-K. Ng, and M. Wong Toward routine automatic pathway discovery from on-line scientific text abstracts Genome Inform. 10 1999 104 112
3. R.K. Lindsay, and M.D. Gordon Literature-based discovery by lexical statistics J. Am. Soc. Inform. Sci. 50 1999 574 587
4. T.C. Rindfleisch, L. Tanabe, J.N. Weinstein, and L. Hunter EDGAR: extraction of drugs, genes and relations from the biomedical literature Pac. Symp. Biocomput. 2000 517 528
5. T. Sekimizu, H.S. Park, and J. Tsujii Identifying the interaction between genes and gene products based on frequently seen verbs in MedLine abstracts Genome Inform. Ser. Workshop Genome Inform. 9 1998 62 71
6. M. Stephens, M. Palakal, S. Mukhopadhyay, R. Raje, and J. Mostafa Detecting gene relations from MedLine abstracts Pac. Symp. Biocomput. 6 2001 483 496
7. E.M. Van Mulligen, M. Diwersy, M. Schmidt, H. Buurman, and B. Mons Facilitating networks of information Proc. AMIA Symp. 2000 868 872
8. N.R. Smallheiser, and D.R. Swanson Using arrowsmith: a computer-assisted approach to formulating and assessing scientific hypotheses Comp. Methods Prog. Biomed. 57 1998 149 153
9. E.M. Van Mulligen, C. Van der Eijk, J.A. Kors, R.J. Schijvenaars, and B. Mons Research for research: tools for knowledge discovery and visualisation Proc. AMIA Symp. 2002 835 839
10. D.A.B. Lindberg, B.L. Humphreys, and A.T. McCray The unified medical language system Methods Inform. Med. 32 1993 281 291
11. J.A. Kors, and A.L. Hoffmann Induction of decision rules that fulfill user-specified performance requirements Pattern Recognit. Lett. 18 1997 1187 1195
12. J. Van der Lei, J.S. Duisterhout, H. Westerhof, E. Van der Does, P.V.M. Cromme, W.M. Boon, and J.H. Van Bemmel The introduction of computer-based patient records in the Netherlands Annu. Intern. Med. 119 1993 1036 1041
13. J. Van der Lei, M.A. Musen, E. van der Does, A. Man in 't Veld, and J.H. van Bemmel Review of physician decision-making using data from computer-stored medical records Lancet 338 1991 1504 1508
14. M.A. Van Wijk, J. van der Lei, M. Mosseveld, A.M. Bohnen, and J.H. van Bemmel Assessment of decision support for blood test ordering in primary care. A randomized trial Ann. Intern. Med. 134 2001 274 281
15. J.H. Van Bemmel, J.A. Kors, and G. Van Herpen Methodology of the modular ECG analysis system MEANS Methods Inform. Med. 29 1990 346 353
16. J.L. Willems, C. Abreu-Lima, and J.H. Van Bemmel The diagnostic performance of computer programs for the interpretation of electrocardiograms N. Engl. J. Med. 325 1991 1767 1773
17. J.A. Kors, R.S. Crow, P.J. Hannan, P. Rautaharju, and A.R. Folsom Comparison of computer-assigned Minnesota codes with the visual standard method for new coronary heart disease events Am. J. Epidemiol. 151 2000 790 797
18. A.E. Vlug, J. Van der Lei, B.M.T. Mosseveld, M.A.M. Van Wijk, P.D. Van der Linden, M.C.J.M. Sturkenboom, and J.H. Van Bemmel Postmarketing surveillance based on electronic patient records: the IPCI project Methods Inform. Med. 38 1999 339 344
19. L.E. Visser, A.E. Vlug, J. Van der Lei, and BH.C. Stricker Cough due to ACE inhibitors: a case-control study using automated general practice data Eur. J. Clin. Pharmacol. 49 1996 439 444
20. P.D. Van der Linden, J. Van der Lei, A.E. Vlug, and B.H.C. Stricker Skin reactions to antibacterial agents in general practice J. Clin. Epidemiol. 51 1998 703 708
21. M.J. Engelhart, M.I. Geerlings, and A. Ruitenberg Dietary intake of oxidants and risks of Alzheimer's disease: the Rotterdam study Am. J. Genet. 70 2002 1567 1574
22. J.M. Gaspoz, P.G. Coxson, P.A. Goldman, and P.A. Williams Cost-effectiveness of aspirin, clopidogrel, or both for secondary prevention of coronary heart disease JAMA 287 2002 3223 3229
23. M. Hollander, M.L. Bots, and A. Iglesias der Sol Cartotid plaques increase the risk of stroke and subtypes of cerebral infarction in asymptomatic elderly: the Rotterdam study N. Engl. J. Med. 346 2002 1800 1806
24. N. Vaessen, J.A. Janssen, and P. Heutink Association between genetic variation in the gene for insulin-like growth factor-I JAMA 288 2002 2015 2022
25. O.T. Njajou, N. Vaessen, and M. Joosse A mutation in SLC11A3 gene is associated with autosomal dominant hemochromatosis Nat. Genet. 28 2001 214 215
26. C.M. Van Duijn, M.C.J. Dekker, and V. Bonifati PARK7, a novel locus for autosomal recessive early-onset Parkinsonism on chromosome 1p36 Am. J. Hum. Genet. 69 2001 629 634
27. V. Bonifati, P. Rizzu, and J. van Baren Mutations in the DJ-1 gene associated with autosomal recessive early-onset Parkinsonism Science 299 2003 256 259