Autophagy: A forty-year search for a missing membrane source

PLoS Biology

Volumn 4, Issue 2, 2006, Pages 161-164

  Juhasz, Gabor ^a   Neufeld, Thomas P ^a  

^a UNIVERSITY OF MINNESOTA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AUTOPHAGY; CELL MATURATION; CELL MEMBRANE; CELL ORGANELLE; CELL TYPE; ENDOPLASMIC RETICULUM; GENE IDENTIFICATION; MORPHOLOGY; NONHUMAN; REVIEW; ANIMAL; ARTICLE; BIOLOGICAL MODEL; CELL MEMBRANE POTENTIAL; HUMAN; METABOLISM; RESEARCH; TIME; ULTRASTRUCTURE;

ANIMALS; AUTOPHAGY; CELL MEMBRANE; HUMANS; MEMBRANE POTENTIALS; MODELS, BIOLOGICAL; RESEARCH; TIME FACTORS;

EID: 33244481532     PISSN: 15457885     EISSN: None     Source Type: Journal    
DOI: 10.1371/journal.pbio.0040036     Document Type: Review

References (28)

1. De Duve C, Wattiaux R (1966) Functions of lysosomes. Annu Rev Physiol 28: 435-492.
2. Levine B, Klionsky DJ (2004) Development by self-digestion: Molecular mechanisms and biological functions of autophagy. Dev Cell 6: 463-477.
3. Bellu AR, Kiel JA (2003) Selective degradation of peroxisomes in yeasts. Microsc Res Tech 61: 161-170.
4. Rusten TE, Lindmo K, Juhasz G, Sass M, Seglen PO, et al. (2004) Programmed autophagy in the Drosophila fat body is induced by ecdysone through regulation of the PI3K pathway. Dev Cell 7: 179-192.
5. Scott RC, Schuldiner O, Neufeld TP (2004) Role and regulation of starvation-induced autophagy in the Drosophila fat body. Dev Cell 7: 167-178.
6. Neufeld TP (2004) Role of autophagy in developmental cell growth and death: Insights from Drosophila. In: Klionsky DJ, editor. Autophagy. Georgetown: Landes Bioscience. pp. 224-232.
7. Komatsu M, Waguri S, Ueno T, Iwata J, Murata S, et al. (2005) Impairment of starvation-induced and constitutive autophagy in Atg7-deficient mice. J Cell Biol 169: 425-434.
8. Pfeifer U (1978) Inhibition by insulin of the formation of autophagic vacuoles in rat liver. A morphometric approach to the kinetics of intracellular degradation by autophagy. J Cell Biol 78: 152-167.
9. Ashford TP, Porter KR (1962) Cytoplasmic components in hepatic cell lysosomes. J Cell Biol 12: 198-202.
10. Reggiori F, Klionsky DJ (2005) Autophagosomes: Biogenesis from scratch? Curr Opin Cell Biol 17: 415-422.
11. Seglen PO (1987) Regulation of autophagic protein degradation in isolated liver cells. In: Glaumann H, Ballard FJ, editors. Lysosomes: Their role in protein breakdown. London: Academic Press. pp. 369-414.
12. Rez G, Meldolesi J (1980) Freeze-fracture of drug-induced autophagocytosis in the mouse exocrine pancreas. Lab Invest 43: 269-277.
13. Kovacs AL, Rez G, Palfia Z, Kovacs J (2000) Autophagy in the epithelial cells of murine seminal vesicle in vitro. Formation of large sheets of nascent isolation membranes, sequestration of the nucleus and inhibition by wortmannin and 3-methyladenine. Cell Tissue Res 302: 253-261.
14. Fengsrud M, Erichsen ES, Berg TO, Raiborg C, Seglen PO (2000) Ultrastructural characterization of the delimiting membranes of isolated autophagosomes and amphisomes by freeze-fracture electron microscopy. Eur J Cell Biol 79: 871-882.
15. Stromhaug PE, Klionsky DJ (2001) Approaching the molecular mechanism of autophagy. Traffic 2: 524-531.
16. Klionsky DJ, Cregg JM, Dunn WA Jr, Emr SD, Sakai Y, et al. (2003) A unified nomenclature for yeast autophagy-related genes. Dev Cell 5: 539-545.
17. Ichimura Y, Kirisako T, Takao T, Satomi Y, Shimonishi Y, et al. (2000) A ubiquitin-like system mediates protein lipidation. Nature 408: 488-492.
18. Mizushima N, Yamamoto A, Matsui M, Yoshimori T, Ohsumi Y (2004) In vivo analysis of autophagy in response to nutrient starvation using transgenic mice expressing a fluorescent autophagosome marker. Mol Biol Cell 15: 1101-1111.
19. Dunn WA (1994) Autophagy and related mechanisms of lysosome-mediated protein degradation. Trends Cell Biol 4: 139-143.
20. Fengsrud M, Sneve ML, Overbye A, Seglen PO (2004) Structural aspects of mammalian autophagy. In: Klionsky DJ, editor. Autophagy. Georgetown (Texas): Landes Bioscience. pp. 11-25.
21. Ishihara N, Hamasaki M, Yokota S, Suzuki K, Kamada Y, et al. (2001) Autophagosome requires specific early Sec proteins for its formation and NSF/SNARE for vacuolar fusion. Mol Biol Cell 12: 3690-3702.
22. Mizushima N, Yamamoto A, Hatano M, Kobayashi Y, Kabeya Y, et al. (2001) Dissection of autophagosome formation using Apg5-deficient mouse embryonic stem cells. J Cell Biol 152: 657-668.
23. Reggiori F, Tucker KA, Stromhaug PE, Klionsky DJ (2004) The Atg1-Atg13 complex regulates Atg9 and Atg23 retrieval transport from the pre-autophagosomal structure. Dev Cell 6: 79-90.
24. Kirisako T, Baba M, Ishihara N, Miyazawa K, Ohsumi M, et al. (1999) Formation process of autophagosome is traced with Apg8/Aut7p in yeast. J Cell Biol 147: 435-446.
25. Kuerschner L, Ejsing CS, Ekroos K, Shevchenko A, Anderson KI, et al. (2005) Polyene-lipids: A new tool to image lipids. Nat Methods 2: 39-45.
26. Noda T, Kim J, Huang WP, Baba M, Tokunaga C, et al. (2000) Apg9p/Cvt7p is an integral membrane protein required for transport vesicle formation in the Cvt and autophagy pathways. J Cell Biol 148: 465-480.
27. Lippincott-Schwartz J, Altan-Bonnet N, Patterson GH (2003) Photobleaching and photoactivation: Following protein dynamics in living cells. Nat Cell Biol (Suppl): S7-S14.
28. Gaietta G, Deerinck TJ, Adams SR, Bouwer J, Tour O, et al. (2002) Multicolor and electron microscopic imaging of connexin trafficking. Science 296: 503-507.