-
1
-
-
33144480064
-
Detection and characterization of male-specific RNA coliphages in a New York City reservoir
-
J. J. McDonnell, D. L. Leopold, J. B. Stribling, and L. R. Neville (ed.). American Water Resources Association, Herndon, Va.
-
Alderisio, K. A., D. A. Wait, and M. D. Sobsey. 1996. Detection and characterization of male-specific RNA coliphages in a New York City reservoir, p. 133-142. In J. J. McDonnell, D. L. Leopold, J. B. Stribling, and L. R. Neville (ed.), Watershed restoration management, New York City water supply studies. American Water Resources Association, Herndon, Va.
-
(1996)
Watershed Restoration Management, New York City Water Supply Studies
, pp. 133-142
-
-
Alderisio, K.A.1
Wait, D.A.2
Sobsey, M.D.3
-
2
-
-
0030047443
-
An oligonucleotide hybridization assay for the identification and enumeration of F-specific RNA phages in surface water
-
Beekwilder, J., R. Nieuwenhuizen, A. H. Havelaar, and J. van Duin. 1996. An oligonucleotide hybridization assay for the identification and enumeration of F-specific RNA phages in surface water. J. Appl. Bacteriol. 80:179-186.
-
(1996)
J. Appl. Bacteriol.
, vol.80
, pp. 179-186
-
-
Beekwilder, J.1
Nieuwenhuizen, R.2
Havelaar, A.H.3
Van Duin, J.4
-
3
-
-
0029911755
-
Secondary structure model for the first three domains of Q beta RNA. Control of A-protein synthesis
-
Beekwilder, J., R. Nieuwenhuizen, R. Poot, and J. van Duin. 1996. Secondary structure model for the first three domains of Q beta RNA. Control of A-protein synthesis. J. Mol. Biol. 256:8-19.
-
(1996)
J. Mol. Biol.
, vol.256
, pp. 8-19
-
-
Beekwilder, J.1
Nieuwenhuizen, R.2
Poot, R.3
Van Duin, J.4
-
4
-
-
0035089952
-
Phylogeny, genome evolution, and host specificity of single-stranded RNA bacteriophage (family Leviviridae)
-
Bollback, J. P., and J. P. Huelsenbeck. 2001. Phylogeny, genome evolution, and host specificity of single-stranded RNA bacteriophage (family Leviviridae). J. Mol. Evol. 52:117-128.
-
(2001)
J. Mol. Evol.
, vol.52
, pp. 117-128
-
-
Bollback, J.P.1
Huelsenbeck, J.P.2
-
5
-
-
0035986550
-
F-specific RNA coliphages: Occurrence, types, and survival in natural waters
-
Brion, G. M., J. S. Meschke, and M. D. Sobsey. 2002. F-specific RNA coliphages: occurrence, types, and survival in natural waters. Water Res. 36:2419-2425.
-
(2002)
Water Res.
, vol.36
, pp. 2419-2425
-
-
Brion, G.M.1
Meschke, J.S.2
Sobsey, M.D.3
-
6
-
-
33144468703
-
Leviviridae
-
Büchen-Osmond, C. (ed.). ICTVdB Management, Columbia University, New York, N. Y.
-
Büchen-Osmond, C. (ed.). 2003. Leviviridae. In ICTVdB-The Universal Virus Database, version 3. ICTVdB Management, Columbia University, New York, N. Y.
-
(2003)
ICTVdB - The Universal Virus Database, Version 3
-
-
-
7
-
-
0031767751
-
Occurrence of male-specific bacteriophage in feral and domestic animal wastes, human feces, and human-associated wastewaters
-
Calci, K. R., W. Burkhardt III, W. D. Watkins, and S. R. Rippey. 1998. Occurrence of male-specific bacteriophage in feral and domestic animal wastes, human feces, and human-associated wastewaters. Appl. Environ. Microbiol. 64:5027-5029.
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, pp. 5027-5029
-
-
Calci, K.R.1
Burkhardt III, W.2
Watkins, W.D.3
Rippey, S.R.4
-
8
-
-
0027336589
-
Comparative survival of indicator viruses and enteric viruses in seawater and sediment
-
Chung, H., and M. D. Sobsey. 1993. Comparative survival of indicator viruses and enteric viruses in seawater and sediment. Water Sci. Technol. 27:425-428.
-
(1993)
Water Sci. Technol.
, vol.27
, pp. 425-428
-
-
Chung, H.1
Sobsey, M.D.2
-
9
-
-
0242489236
-
+ RNA and DNA coliphages as source-specific indicators of fecal contamination in surface waters
-
+ RNA and DNA coliphages as source-specific indicators of fecal contamination in surface waters. Appl. Environ. Microbiol. 69:6507-6514.
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, pp. 6507-6514
-
-
Cole, D.1
Long, S.C.2
Sobsey, M.D.3
-
10
-
-
0028483444
-
Bacteriophages presence in human faeces of healthy subjects and patients with gastrointestinal disturbances
-
Cornax, R., M. A. Morinigo, F. Gonzalez-Jaen, M. C. Alonso, and J. J. Borrego. 1994. Bacteriophages presence in human faeces of healthy subjects and patients with gastrointestinal disturbances. Zentbl. Bakteriol. 281:214-224.
-
(1994)
Zentbl. Bakteriol.
, vol.281
, pp. 214-224
-
-
Cornax, R.1
Morinigo, M.A.2
Gonzalez-Jaen, F.3
Alonso, M.C.4
Borrego, J.J.5
-
12
-
-
0024297354
-
Multiple sequence alignment with hierarchical clustering
-
Corpet, F. 1988. Multiple sequence alignment with hierarchical clustering. Nucleic Acids Res. 16:10881-10890.
-
(1988)
Nucleic Acids Res.
, vol.16
, pp. 10881-10890
-
-
Corpet, F.1
-
13
-
-
0031916242
-
Rates of spontaneous mutation
-
Drake, J. W., B. Charlesworth, D. Charlesworth, and J. F. Crow. 1998. Rates of spontaneous mutation. Genetics 148:1667-1686.
-
(1998)
Genetics
, vol.148
, pp. 1667-1686
-
-
Drake, J.W.1
Charlesworth, B.2
Charlesworth, D.3
Crow, J.F.4
-
14
-
-
1842797614
-
-
Report no. EPA-841-R-02-001. Office of Water, EPA, Washington, D.C.
-
EPA. 2000. 2000 national water quality inventory. Report no. EPA-841-R-02-001. Office of Water, EPA, Washington, D.C.
-
(2000)
2000 National Water Quality Inventory
-
-
-
15
-
-
0001856441
-
Distribution of coliphages in the environment: General considerations
-
S. M. Goyal, C. P. Gerba, and G. Bitton (ed.). John Wiley & Sons, New York, N.Y.
-
Furuse, K. 1987. Distribution of coliphages in the environment: general considerations, p. 87-124. In S. M. Goyal, C. P. Gerba, and G. Bitton (ed.), Phage ecology. John Wiley & Sons, New York, N.Y.
-
(1987)
Phage Ecology
, pp. 87-124
-
-
Furuse, K.1
-
16
-
-
0019509966
-
Distribution of ribonucleic acid coliphages in raw sewage from treatment plants in Japan
-
Furuse, K., A. Ando, S. Osawa, and I. Watanabe. 1981. Distribution of ribonucleic acid coliphages in raw sewage from treatment plants in Japan. Appl. Environ. Microbiol. 41:1139-1143.
-
(1981)
Appl. Environ. Microbiol.
, vol.41
, pp. 1139-1143
-
-
Furuse, K.1
Ando, A.2
Osawa, S.3
Watanabe, I.4
-
17
-
-
33144472088
-
Isolation and grouping of RNA phages. V. A survey in the islands in the adjacent seas of Japan
-
Furuse, K., A. Ando, and I. Watanabe. 1975. Isolation and grouping of RNA phages. V. A survey in the islands in the adjacent seas of Japan. J. Keio. Med. Soc. 52:259-263.
-
(1975)
J. Keio. Med. Soc.
, vol.52
, pp. 259-263
-
-
Furuse, K.1
Ando, A.2
Watanabe, I.3
-
18
-
-
0018189799
-
Distribution of ribonucleic acid coliphages in south and east Asia
-
Furuse, K., T. Sakurai, A. Hirashima, M. Katsuki, A. Ando, and I. Watanabe. 1978. Distribution of ribonucleic acid coliphages in south and east Asia. Appl. Environ. Microbiol. 35:995-1002.
-
(1978)
Appl. Environ. Microbiol.
, vol.35
, pp. 995-1002
-
-
Furuse, K.1
Sakurai, T.2
Hirashima, A.3
Katsuki, M.4
Ando, A.5
Watanabe, I.6
-
19
-
-
24044544223
-
Hepatitis E viruses in animals and humans
-
Goens, S. D., and M. L. Perdue. 2004. Hepatitis E viruses in animals and humans. Anim. Health Res. 5:145-156.
-
(2004)
Anim. Health Res.
, vol.5
, pp. 145-156
-
-
Goens, S.D.1
Perdue, M.L.2
-
20
-
-
0034094638
-
Bacterial indicator occurrence and the use of an F(+) specific RNA coliphage assay to identify fecal sources in Homosassa Springs, Florida
-
Griffin, D. W., R. Stokes, J. B. Rose, and J. H. Paul III. 2000. Bacterial indicator occurrence and the use of an F(+) specific RNA coliphage assay to identify fecal sources in Homosassa Springs, Florida. Microb. Ecol. 39:56-64.
-
(2000)
Microb. Ecol.
, vol.39
, pp. 56-64
-
-
Griffin, D.W.1
Stokes, R.2
Rose, J.B.3
Paul III, J.H.4
-
21
-
-
0029258675
-
Translational control of maturation-protein synthesis in phage MS2: A role for the kinetics of RNA folding?
-
Groeneveld, H., K. Thimon, and J. van Duin. 1995. Translational control of maturation-protein synthesis in phage MS2: a role for the kinetics of RNA folding? RNA 1:79-88.
-
(1995)
RNA
, vol.1
, pp. 79-88
-
-
Groeneveld, H.1
Thimon, K.2
Van Duin, J.3
-
22
-
-
0027337485
-
F-specific RNA bacteriophages are adequate model organisms for enteric viruses in fresh water
-
Havelaar, A. H., M. van Olphen, and Y. C. Drost. 1993. F-specific RNA bacteriophages are adequate model organisms for enteric viruses in fresh water. Appl. Environ. Microbiol. 59:2956-2962.
-
(1993)
Appl. Environ. Microbiol.
, vol.59
, pp. 2956-2962
-
-
Havelaar, A.H.1
Van Olphen, M.2
Drost, Y.C.3
-
23
-
-
0022602470
-
Bacteriophages and indicator bacteria in human and animal faeces
-
Havelaar, A. H., K. Furuse, and W. M. Hogeboom. 1986. Bacteriophages and indicator bacteria in human and animal faeces. J. Appl. Bacteriol. 60:255-262.
-
(1986)
J. Appl. Bacteriol.
, vol.60
, pp. 255-262
-
-
Havelaar, A.H.1
Furuse, K.2
Hogeboom, W.M.3
-
24
-
-
0025061589
-
F-specific RNA bacteriophages and sensitive host strains in faeces and wastewater of human and animal origin
-
Havelaar, A. H., W. M. Pot-Hogeboom, K. Furuse, R. Pot, and M. P. Hormann. 1990. F-specific RNA bacteriophages and sensitive host strains in faeces and wastewater of human and animal origin. J. Appl. Bacteriol. 69:30-37.
-
(1990)
J. Appl. Bacteriol.
, vol.69
, pp. 30-37
-
-
Havelaar, A.H.1
Pot-Hogeboom, W.M.2
Furuse, K.3
Pot, R.4
Hormann, M.P.5
-
25
-
-
0036729786
-
Environmental factors influencing human viral pathogens and their potential indicator organisms in the blue mussel, Mytilus edulis: The first Scandinavian report
-
Hernroth, B. E., A. C. Conden-Hansson, A. S. Rehnstam-Holm, R. Girones, and A. K. Allard. 2002. Environmental factors influencing human viral pathogens and their potential indicator organisms in the blue mussel, Mytilus edulis: the first Scandinavian report. Appl. Environ. Microbiol. 68:4523-4533.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 4523-4533
-
-
Hernroth, B.E.1
Conden-Hansson, A.C.2
Rehnstam-Holm, A.S.3
Girones, R.4
Allard, A.K.5
-
26
-
-
0035673354
-
Removal of Salmonella and microbial indicators in constructed wetlands treating swine wastewater
-
Hill, V. R., and M. D. Sobsey. 2001. Removal of Salmonella and microbial indicators in constructed wetlands treating swine wastewater. Water Sci. Technol. 44:215-222.
-
(2001)
Water Sci. Technol.
, vol.44
, pp. 215-222
-
-
Hill, V.R.1
Sobsey, M.D.2
-
27
-
-
0028839565
-
Genotyping male-specific RNA coliphages by hybridization with oligonucleotide probes
-
Hsu, F. C., Y. S. Shieh, J. van Duin, M. J. Beekwilder, and M. D. Sobsey. 1995. Genotyping male-specific RNA coliphages by hybridization with oligonucleotide probes. Appl. Environ. Microbiol. 61:3960-3966.
-
(1995)
Appl. Environ. Microbiol.
, vol.61
, pp. 3960-3966
-
-
Hsu, F.C.1
Shieh, Y.S.2
Van Duin, J.3
Beekwilder, M.J.4
Sobsey, M.D.5
-
28
-
-
0035163073
-
Human adenoviruses and coliphages in urban runoff-impacted coastal waters of Southern California
-
Jiang, S., R. Noble, and W. Chu. 2001. Human adenoviruses and coliphages in urban runoff-impacted coastal waters of Southern California. Appl. Environ. Microbiol. 67:179-184.
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 179-184
-
-
Jiang, S.1
Noble, R.2
Chu, W.3
-
30
-
-
0036139211
-
MEGA2: Molecular evolutionary genetics analysis software
-
Kumar, S., K. Tamura, I. B. Jakobsen, and M. Nei. 2001. MEGA2: molecular evolutionary genetics analysis software. Bioinformatics 17:1244-1245.
-
(2001)
Bioinformatics
, vol.17
, pp. 1244-1245
-
-
Kumar, S.1
Tamura, K.2
Jakobsen, I.B.3
Nei, M.4
-
32
-
-
0033071122
-
Alternatives to minimize the environmental impact of large swine production units
-
Miner, J. R. 1999. Alternatives to minimize the environmental impact of large swine production units. J. Anim. Sci. 77:440-444.
-
(1999)
J. Anim. Sci.
, vol.77
, pp. 440-444
-
-
Miner, J.R.1
-
33
-
-
0003761045
-
-
Springer-Verlag, Vienna, Austria
-
Murphy, F. A., C. M. Fauquet, D. H. L. Bishop, S. A. Ghabrial, A. W. Jarvis, G. P. Martelli, M. A. Mayo, and M. D. Summers. 1995. Virus taxonomy: the classification and nomenclature of viruses. Springer-Verlag, Vienna, Austria.
-
(1995)
Virus Taxonomy: The Classification and Nomenclature of Viruses
-
-
Murphy, F.A.1
Fauquet, C.M.2
Bishop, D.H.L.3
Ghabrial, S.A.4
Jarvis, A.W.5
Martelli, G.P.6
Mayo, M.A.7
Summers, M.D.8
-
34
-
-
2942610631
-
Use of viral pathogens and indicators to differentiate between human and non-human fecal contamination in a microbial source tracking comparison study
-
Noble, R. T., S. A. Allen, A. D. Blackwood, W. Chu, S. C. Jiang, G. L. Lovelace, M. D. Sobsey, J. R. Stewart, and D. A. Wait. 2003. Use of viral pathogens and indicators to differentiate between human and non-human fecal contamination in a microbial source tracking comparison study. J. Water Health 1:195-204.
-
(2003)
J. Water Health
, vol.1
, pp. 195-204
-
-
Noble, R.T.1
Allen, S.A.2
Blackwood, A.D.3
Chu, W.4
Jiang, S.C.5
Lovelace, G.L.6
Sobsey, M.D.7
Stewart, J.R.8
Wait, D.A.9
-
35
-
-
0028852550
-
Nucleotide sequence of a single-stranded RNA phage from Pseudomonas aeruginosa: Kinship to coliphages and conservation of regulatory RNA structures
-
Olsthoorn, R. C., G. Garde, T. Dayhuff, J. F. Atkins, and J. Van Duin. 1995. Nucleotide sequence of a single-stranded RNA phage from Pseudomonas aeruginosa: kinship to coliphages and conservation of regulatory RNA structures. Virology 206:611-625.
-
(1995)
Virology
, vol.206
, pp. 611-625
-
-
Olsthoorn, R.C.1
Garde, G.2
Dayhuff, T.3
Atkins, J.F.4
Van Duin, J.5
-
36
-
-
0019470325
-
Distribution of ribonucleic acid coliphages in animals
-
Osawa, S., K. Furuse, and I. Watanabe. 1981. Distribution of ribonucleic acid coliphages in animals. Appl. Environ. Microbiol. 41:164-168.
-
(1981)
Appl. Environ. Microbiol.
, vol.41
, pp. 164-168
-
-
Osawa, S.1
Furuse, K.2
Watanabe, I.3
-
37
-
-
0019470325
-
Distribution of ribonucleic acid coliphages in Korea
-
Osawa, S., K. Furuse, M. S. Choi, A. Ando, T. Sakurai, and I. Watanabe. 1981. Distribution of ribonucleic acid coliphages in Korea. Appl. Environ. Microbiol. 41:909-911.
-
(1981)
Appl. Environ. Microbiol.
, vol.41
, pp. 909-911
-
-
Osawa, S.1
Furuse, K.2
Choi, M.S.3
Ando, A.4
Sakurai, T.5
Watanabe, I.6
-
38
-
-
0036232982
-
Distribution of genotypes of F-specific RNA bacteriophages in human and non-human sources of faecal pollution in South Africa and Spain
-
Schaper, M., J. Jofre, M. Uys, and W. O. Grabow. 2002. Distribution of genotypes of F-specific RNA bacteriophages in human and non-human sources of faecal pollution in South Africa and Spain. J. Appl. Microbiol. 92:657-667.
-
(2002)
J. Appl. Microbiol.
, vol.92
, pp. 657-667
-
-
Schaper, M.1
Jofre, J.2
Uys, M.3
Grabow, W.O.4
-
39
-
-
0028035121
-
Identification of recognition elements on bacteriophage Q beta minus strand RNA that are essential for template activity with Q beta replicase
-
Schuppli, D., I. Barrera, and H. Weber. 1994. Identification of recognition elements on bacteriophage Q beta minus strand RNA that are essential for template activity with Q beta replicase. J. Mol. Biol. 243:811-815.
-
(1994)
J. Mol. Biol.
, vol.243
, pp. 811-815
-
-
Schuppli, D.1
Barrera, I.2
Weber, H.3
-
40
-
-
0036946650
-
Microbial source tracking: Current methodology and future directions
-
Scott, T. M., J. B. Rose, T. M. Jenkins, S. R. Farrah, and J. Lukasik. 2002. Microbial source tracking: current methodology and future directions. Appl. Environ. Microbiol. 68:5796-5803.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 5796-5803
-
-
Scott, T.M.1
Rose, J.B.2
Jenkins, T.M.3
Farrah, S.R.4
Lukasik, J.5
-
42
-
-
0000694197
-
Single-stranded RNA bacteriophages
-
R. Calendar (ed.). Plenum Press, New York, N.Y.
-
van Duin, J. 1998. Single-stranded RNA bacteriophages, p. 117-167. In R. Calendar (ed.), The bacteriophages. Plenum Press, New York, N.Y.
-
(1998)
The Bacteriophages
, pp. 117-167
-
-
Van Duin, J.1
-
43
-
-
8144224232
-
Molecular detection and genotyping of male-specific coliphages by reverse transcription-PCR and reverse line blot hybridization
-
Vinjé, J., S. J. Oudejans, J. R. Stewart, M. D. Sobsey, and S. C. Long. 2004. Molecular detection and genotyping of male-specific coliphages by reverse transcription-PCR and reverse line blot hybridization. Appl. Environ. Microbiol. 70:5996-6004.
-
(2004)
Appl. Environ. Microbiol.
, vol.70
, pp. 5996-6004
-
-
Vinjé, J.1
Oudejans, S.J.2
Stewart, J.R.3
Sobsey, M.D.4
Long, S.C.5
|