Molecular cytogenetic characterization of a novel cell line established from a superficial spreading melanoma

Frontiers in Bioscience

Volumn 11, Issue 2 P.1591-2006, 2006, Pages 1844-1853

  Treszl, Andrea ^a   Ladanyi, Andrea ^b   Rakosy, Zsuzsa ^a   Buczko, Zsuzsa ^c   Adany, Roza ^a   Balazs, Margit ^a  

^a UNIVERSITY OF DEBRECEN   (Hungary)

^b NATIONAL INSTITUTE OF ONCOLOGY   (Hungary)

^c UNIVERSITY OF DEBRECEN   (Hungary)

Author keywords

Array CGH; Comparative Genomic Hybridization; Fluorescence In Situ Hybridization; Melanoma cell line; Spectral Karyotyping

Indexed keywords

EID: 32944462891     PISSN: 27686701     EISSN: 27686698     Source Type: Journal    
DOI: 10.2741/1927     Document Type: Article

References (30)

1. Camplejohn, R.S.: DNA damage and repair in melanoma and non-melanoma skin cancer. Cancer Surv 26, 193-206 (1996)
2. Molife, R. & B. W. Hancock BW: Adjuvant therapy of malignant melanoma. Crit Rev Oncol Hematol 44(1),81-102 (2002)
3. Meric, J.B., O. Rixe & D. Khayat: Metastatic malignant melanoma. Drugs Today (Barc) 39 Suppl C, 17-38 (2003)
4. Schulten, H.J., B. Gunawan, F. Otto, R. Hassmann, C. Hallermann, A. Noebel & L. Fuzesi: Cytogenetic characterization of complex karyotypes in seven established melanoma cell lines by multiplex fluorescence in situ hybridization and DAPI banding. Cancer Genet Cytogenet 133(2),134-141 (2002)
5. Balázs, M., K. Matsumura, D. Moore, D. Pinkel, J.W. Gray & F. Waldman: Karyotypic heterogeneity and its relation to labeling index in interphase breast tumor cells. Cytometry 20,62-73 (1995)
6. Treszl, A., R. Ádány, Zs. Rákosy, L. Kardos, Á. Bégány, K. Gilde & M. Balázs: Extra copies of c-myc are more pronounced in nodular melanomas than in superficial spreading melanomas as revealed by fluorescence in situ hybridization. Cytometry 60(B),37-46 (2004)
7. Schröck, E., S. du Manoir, T. Veldman, B. Schoell., J. Wienberg J., M.A. Ferguson-Smith, Y. Ning, D.H. Ledbetter, I. Bar-Am, D. Soenksen, Y. Garini & T. Ried: Multicolor Spectral Karyotyping of Human chromosomes. Science 273,494-497 (1996)
8. Balazs, M., Zs. Adam, A. Treszl, Á. Bégány, J. Hunyadi & R. Ádány: Chromosomal imbalances in primary and metastatic melanomas revealed by comparative genomic hybridization. Cytometry 46,222-232 (2001)
9. Snijders A.M., N. Nowak, R. Segraves, S. Blackwood, N. Brown, J. Conroy, G. Hamilton, A.K. Hindle, B. Huey, K. Kimura, S. Law, K. Myambo, J. Palmer, B. Ylstra, J.P. Yue, J.W. Gray, A.N. Jain, D. Pinkel & D.G. Albertson: Assembly of microarrays for genome-wide measurement of DNA copy number. Nat Genet 29(3),263-264 (2001)
10. Pinkel, D., R. Segraves, D. Sudar, S. Clark, I. Poole, D. Kowbel, C. Collins, W.L. Kuo, C. Chen, Y. Zhai, S.H. Dairkee, B.M. Ljung, J.W. Gray & D.G. Albertson: High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays. Nat Genet 20(2),207-211 (1998)
11. Jain, E.: Distributed computing in bioinformatics. Appl Bioinformatics 1(1),13-20 (2002)
12. Paris, P.L., D.G. Albertson, J.C. Alers, A. Andaya, P. Carroll, J. Fridlyand, A.N. Jain, S. Kamkar, D. Kowbel, P.J. Krijtenburg, D. Pinkel, F.H. Schroder, K.J. Vissers, V.J. Watson, M.F. Wildhagen, C. Collins & H. Van Dekken: High-resolution analysis of paraffin-embedded and formalin-fixed prostate tumors using comparative genomic hybridization to genomic microarrays. Am J Pathol 162(3),763-770 (2003)
13. Shackney, S.E., C.A. Smith, B.W. Miller, D.R. Burholt, K. Murtha, H.R. Giles, D.M. Ketterer & A.A. Pollice: Model for the genetic evolution of human solid tumors. Cancer Res 15;49(12),3344-3354 (1989)
14. Guan, X.Y., H.E. Zhang, H. Zhou, J.S. Sham, J.M. Fung & J.M. Trent: Characterization of a complex chromosome rearrangement involving 6q in a melanoma cell line by chromosome microdissection. Cancer Genet Cytogenet 134(1),65-70 (2002)
15. Wiltshire R.N., T.R. Dennis, V.K. Sondak, P.S. Meltzer & J.M. Trent: Application of molecular cytogenetic techniques in a case study of human cutaneous metastatic melanoma. Cancer Genet Cytogenet 31(2),97-103 (2001)
16. Trent J.M., F.L. Meyskens, S.E. Salmon, K. Ryschon, S.P.L. Leong, J.R. Davis & D.L. McGee: Relation of cytogenetic abnormalities and clinical outcome in metastatic melanoma. N Eng J Med 322,1508-1511 (1990)
17. Isola, J., S. DeVries, L. Chu, S. Ghazvini & F. Waldman: Analysis of changes in DNA sequence copy number by comparative genomic hybridization in archival paraffin-embedded tumor samples. Am J Pathol 145(6),1301-1308 (1994)
18. Trotter M.J., R. Colwell & V.A. Tron: Thrombospondin-1 and cutaneous melanoma. J Cutan Med Surg 7(2),136-141 (2003)
19. Bastian, B.C., P.E. LeBoit, H. Hamm, E.B. Brocker & D. Pinkel: Chromosomal gains and losses in primary cutaneous melanomas detected by comparative genomic hybridization. Cancer Res 58(10),2170-2175 (1998)
20. Edmunds, S.C., I.A. Cree, F. Di Nicolantonio, J.L. Hungerford, J.S. Hurren & D.P. Kelsell: Absence of BRAF gene mutations in uveal melanomas in contrast to cutaneous melanomas. Brit J Cancer 88,1403-1405 (2003)
21. Box, N.F., D.L. Duffy, W. Chen, M. Stark, N.G. Martin, R.A. Sturm & N.K. Hayward: MC1R genotype modifies risk of melanoma in families segregating CDKN2A mutations. Am. J. Hum. Genet 69,765-773 (2001)
22. Sharpless N.B., S. Alson, S. Chan, D.P. Silver, D.H. Castrillon & R.A. DePinho: p16INK4a and p53 deficiency cooperate in tumorigenesis. Cancer Res 62,2761-2765 (2002)
23. Petty, E.M., J.L. Bolognia, A.E. Bale & T. Yang-Feng: Cutaneous malignant melanoma and atypical moles associated with a constitutional rearrangement of chromosomes 5 and 9. Am J Med Genet 45,77-80 (1993)
24. Cowan, J.M., R. Halaban & U. Francke: Cytogenetic analysis of melanocytes from premalignant nevi and melanomas. J Natl Cancer Inst 80(14),1159-1164 (1988)
25. Poetsch, M, T. Dittbemer & C. Woenckhaus: Can different genetic changes characterize histogenetic subtypes and biologic behavior in sporadic malignant melanoma of the skin? Cell Mol Life Sci 60(9),1923-1932 (2003)
26. Zhou Y.H., F. Tan, K.R. Hess & W.K. Yung: The expression of PAX6, PTEN, vascular endothelial growth factor, and epidermal growth factor receptor in gliomas: relationship to tumor grade and survival. Clin Cancer Res 9(9),3369-3375 (2003)
27. Tomlinson I.P., N.B. Beck & W.F. Bodmer: Allele loss on chromosome 11q and microsatellite instability in malignant melanoma. Eur J Cancer 32A(10),1797-802 (1996)
28. Bastian, B.C., A.B. Olshen, P.E. LeBoit & D. Pinkel: Classifying melanocytic tumors based on DNA copy number changes. Am J Pathol 163(5),1765-1770 (2003)
29. Herlyn, M., C. Berking, G. Li & K. Satyamoorthy: Lessons from melanocyte development for understanding the biological events in naevus and melanoma formation. Melanoma Res 10(4),303-312 (2000)
30. Barks, J.H., F.H. Thompson, R. Taetle, J.M. Yang, J.F. Stone, J.A. Wymer, R. Khavari, X.Y. Guan, J.M. Trent, D. Pinkel & M.A. Nelson: Increased chromosome 20 copy number detected by fluorescence in situ hybridization (FISH) in malignant melanoma. Genes Chromosomes Cancer 19(4),278-85 (1997)