Development of a spatial terrestrial nitrogen model for application to Douglas-fir forest ecosystems

Ecological Modelling

Volumn 193, Issue 3-4, 2006, Pages 340-362

  Tonitto, Christina ^a,b   Powell, Thomas M ^b  

^a Department of Obstetrics Gynecology   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Diffusion; Douglas fir; Michaelis Menten; Nitrogen transport; Spatially explicit; Terrestrial nitrogen model

Indexed keywords

DIFFUSION; GEOLOGIC MODELS; NITROGEN; PERTURBATION TECHNIQUES;

DOUGLAS-FIR; MICHAELIS-MENTEN; TERRESTRIAL NITROGEN MODEL;

ECOSYSTEMS;

BIOGEOCHEMISTRY; CONIFEROUS TREE; MODELING; NITROGEN;

PSEUDOTSUGA; PSEUDOTSUGA MENZIESII;

EID: 32644454759     PISSN: 03043800     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ecolmodel.2005.08.041     Document Type: Article

References (65)

1. J. Aber, and A. Federer A generalized, lumped-parameter model of photosynthesis, evapotranspiration and net primary production in temperate and boreal forest ecosystems Oecologia 92 4 1992 463 474
2. J. Aber, S. Ollinger, and C. Driscoll Modeling nitrogen saturation in forest ecosystems in response to land use and atmospheric deposition Ecol. Model. 101 1997 61 78
3. G. Ågren, and E. Bosatta Theoretical Ecosystem Ecology: Understanding Element Cycles 1996 Cambridge University Press
4. P. Becket, and R. Webster Soil variability: a review Soils Fertilizers 34 1971 1 15
5. D. Binkley, P. Sollins, R. Bell, D. Sachs, and D. Myrold Biogeochemistry of adjacent conifer and Alder-Conifer stands Ecology 73 6 1992 2022 2033
6. S. Birkinshaw, and J. Ewen Modelling nitrate transport in the slapton wood catchment using shetran J. Hydrol. 230 2000 18 33
7. S. Birkinshaw, and J. Ewen Nitrogen transformation component for shetran catchement nitrate transport modeling J. Hydrol. 230 2000 1 17
8. - contamination in two agricultural watersheds Water Resour. Res. 31 1995 2319 2339
9. Bosatta, E., 1980. Plant-soil system of an old Scots pine forest in central Sweden. In: Simulaton of Nitrogen Behaviour of Soil-Plant systems. Wageningen, the Netherlands, pp. 155-171
10. Bosatta, E., Iskandar, I., Juma, N., Kruh, G., Reuss, J., Tanji, K., van Veen, J., 1980. Soil microbiology. In: Simulaton of Nitrogen Behaviour of Soil-Plant Systems. Wageningen, the Netherlands, pp. 38-44
11. D. Botkin, J. Janak, and J.R. Wallis Some ecological consequences of a computer model of forest growth J. Ecol. 60 1972 849 872
12. H. Chen, M. Harmon, and R.P. Griffiths Decomposition and nitrogen release from decomposing woody roots in coniferous forests of the Pacific Northwest: a chronosequence approach Can. J. Forest Res. 31 2001 246 260
13. W. Currie, and J. Aber Modeling leaching as a decomposition process in humid, montane forests Ecology 78 1997 1844 1860
14. Curtis, R.O., Clendenen, G.W., Demars, D.J., 1981. A New Stand Simulator for Coast Douglas-fir: DFSIM User's Guide, vol. 128. USDA For. Serv. Gen. Tech. Re PNW-128 Pacific Northwest Forest and Range Experiment Station, Portland, Oregon, pp. 1-79.
15. Donnelly, D.M., 1997. Pacific Northwest Coast Variant of the Forest Vegetation Simulator. Technical Report. WO-Forest Management Service Center, USDA Forest Service, Fort Collins, Colorado
16. L. Edelstein-Keshet Mathematical Models in Biology 1988 McGraw-Hill, Inc
17. Edmonds, R.L., 1991. Organic matter decomposition in western United States forests. In: Harvey, A., Neuenschwander, L. (Eds.). Proceedings - Management and Productivity of Western-Montane Forest Soils. General Technical Report INT-280. USDA Forest Service, pp. 118-128
18. R.L. Edmonds, D. Binkley, M.C. Feller, P. Sollins, A. Abee, and D.D. Myrold Nutrient cycling: effects on productivity of northwest forests Maintaining the Long-term Productivity of Pacific Northwest Forest Ecosystems 1989 Timber Press Portland, Oregon pp. 17-35
19. J.M. Geist, J.W. Hazard, and K.W. Seidel Assessing physical conditions of some Pacific Northwest volcanic ash soils after forest harvest Soil Sci. Soc. Am. J. 53 1989 946 950
20. S. Gessel, D. Lacate, G. Weetman, and R. Powers Sustained Productivity of Forest Soils 1990 University of British Columbia Vancouver, BC, Canada
21. H. Gholz, D. Wedin, S. Smitherman, M. Harmon, and W. Parton Long-term dynamics of pine and hardwood litter in contrasting environments: toward a global model of decomposition Global Change Biol. 6 2000 751 765
22. H.L. Gholz, G.M. Hawk, A. Campbell, K. Cromack, and A.T. Brown Jr. Early vegetation recovery and element cycles on a clear-cut watershed in western Oregon Can. J. Forest Res. 15 1985 400 409
23. C.L. Goodale, and J.D. Aber The long-term effects of land-use history on nitrogen cycling in northern hardwood forests Ecol. Appl. 11 1 2001 253 267
24. R. Grant Simulation of ecological controls on nitrification Soil Biol. Biochem. 26 3 1994 305 315
25. M. Harmon, J. Franklin, F. Swanson, P. Sollins, J. Lattin, N. Anderson, S. Gregory, S. Cline, N. Aumen, J. Sedell, G.K. Lienkaemper, J. Cromack, and K. Cummins The ecology of course woody debris in temperate ecosystems Recent Adv. Ecol. Res. 15 1986 133 302
26. S.C. Hart Nitrogen transformations in fallen tree boles and mineral soil of an old-growth forest Ecology 80 4 1999 1385 1394
27. S.C. Hart, and P. Sollins Soil carbon and nitrogen pools and processes in an old-growth conifer forest 13 years after trenching Can. J. Forest Res. 28 1998 1261 1265
28. P.S. Homann, B.A. Caldwell, H. Chappell, P. Sollins, and C.W. Swanston Douglas-fir soil c and n properties a decade after termination of urea fertilization Can. J. Forest Res. 31 12 2001 2225 2236
29. J. Houghton, Y. Ding, D. Griggs, M. Noguer, P. van der Linden, X. Dai, K. Maskell, and C. Johnson Climate Change 2001: The Scientific Basis 2001 Cambridge University Press
30. D.W. Johnson, J.M. Kelly, W. Swank, D. Cole, H. Van Miegroet, J. Hornbeck, R. Pierce, and D. Van Lear The effects of leaching and whole-tree harvesting on cation budgets of several forests J. Environ. Qual. 17 1988 418 424
31. R.R. Johnson Westside Cascades Prognosis Geographic Variant of the Forest Vegetation Simulator, vol. 1, no. 1 1994 USDA, WO-TM Service Center pp. 1-100
32. L. Lapidus, and G.F. Pinder Numerical Solution of Partial Differential Equations in Science and Engineering 1982 John Wiley & Sons, Inc
33. C. Loehle, and P. Johnson A framework for modeling microbial transport and dynamics in the subsurface Ecol. Model. 73 1994 31 49
34. A.H. Magill, J.D. Aber, G.M. Berntson, W.H. McDowell, K.J. Nadelhoffer, J.M. Melillo, and P. Steudeler Long-term nitrogen additions and nitrogen saturation in two temperate forests Ecosystems 3 2000 238 253
35. 2) Emission Estimates (1751-1999). Technical Report. Carbon Dioxide Information Analysis Center (CDIAC), Oak Ridge National Laboratory Oak Ridge, Tennessee
36. C.W. Martin, and R.D. Harr Logging of mature Douglas-fir in western Oregon has little effect on nutrient output budgets Can. J. Forest Res. 19 1988 35 43
37. McGill, W., Hunt, H., Woodmansee, R., Reuss, J., Paustian, K. (1980). Formulation, process controls, parameters and performance of PHOENIX: A model of carbon and nitrogen dynamics in grassland soils. In: Simulaton of Nitrogen Behaviour of Soil-Plant Systems. Wageningen, the Netherlands, pp. 171-191,
38. D.K. McNabb, J. Cromack, and R. Fredriksen Variability of nitrogen and carbon in surface soils of six forest types in the Oregon Cascades Soil Sci. Soc. Am. J. 50 1986 1037 1041
39. J. Molenat, and C. Gascuel-Odoux Modelling flow and nitrate transport in groundwater for the prediction of water travel times and of consequences of land use evolution on water quality Hydrol. Process. 16 2002 479 492
40. J.D. Murray Mathematical Biology 1993 Springer-Verlag
41. O'Neill, K., Amacher, M., 2003. Forest Inventory and Analysis Soil Quality Indicator. Technical Report. USDA Forest Service, Washington, DC.
42. Paul, E.A., Clark, F.E., 1996. Soil Microbiology and Biochemistry. Academic Press. pp. 340.
43. H. Parnas Model for decomposition of organic material by microorganisms Soil Biol. Biochem. 7 1975 161 169
44. Parton, W., Cole, C., Schimel, D., 1994. A general model for soil organic matter dynamics: sensitivity to litter chemistry, texture and management. In: Quantitative Modeling of Soil Forming Processes, vol. 39. SSSA Special Publication, pp. 147-167
45. W. Parton, J. Stewart, and C. Cole Dynamics of C, N, P and S in grassland soils: a model Biogeochemistry 5 1988 109 131
46. C. Potter, J. Randerson, C. Field, P. Matson, P. Vitousek, H. Mooney, and S. Klooster Terrestrial ecosystem production: A process model based on global satellite and surface data Global Biogeochem. Cycles 7 4 1993 811 841
47. J. Raich, E. Rastetter, J. Melillo, D. Kicklighter, P. Steudler, B. Peterson, A.B. Grace, I. Moore, and C. Vorosmarty Potential net primary productivity in South America: application of a global model Ecol. Appl. 1 1991 399 429
48. 2: a balanced-nutrition, coupled-element-cycles model Ecol. Appl. 7 2 1997 444 460
49. 2, climate, and N deposition Tree Physiol. 9 1991 101 126
50. A. Richardson Coarse root elongation rate estimates for interior Douglas-fir Tree Physiol. 20 2000 825 829
51. S. Running, and S. Gower Forest-BGC a general model of forest ecosystem processes for regional applications, II. Dynamic carbon allocation and nitrogen budgets Tree Physiol. 9 1 1991 147 160
52. D. Schimel, T. Kittel, and W. Parton Terrestrial biogeochemical cycles: Global interactions with the atmosphere and hydrology Tellus 43 1991 188 203
53. H. Shugart A Theory of Forest Dynamics 1984 Springer-Verlag
54. H. Shugart, and D. West Development of an Appalachian deciduous forest succession model and its application to assessment of the impact of the chestnut blight J. Environ. Manage. 5 1977 161 179
55. J. Smit, and R. van den Driessche Root growth and water use efficiency of Douglas-fir (Pseudotsuga menziesii (Mirb.) Franco) and lodgepole pine (Pinus banksiana) seedlings Tree Physiol. 11 1992 401 410
56. P. Sollins, C. Grier, F.K. McCorison, and R. Fogel Jr. The internal element cycles of an old-growth Douglas-fir ecosystem in western Oregon Ecol. Monogr. 50 3 1980 261 285
57. P.K.C. Sollins, F.M. McCorrison, R.H. Waring, and R.D. Harr Jr. Changes in nitrogen cycling at an old-growth Douglas-fir site after disturbance J. Environ. Qual. 10 1 1981 37 41
58. S. Strogatz Nonlinear Dynamics and Chaos 1994 Addison Wesley
59. Tonitto, C., 2002. Spatial models of terrestrial biogeochemistry: field and model studies of Douglas-fir forests. Ph.D. Thesis. University of California, Berkeley, Berkeley, CA 94720
60. van Veen, J., Frissel, M., 1980. Simulation model of the behaviour of N in soil. In: Simulaton of Nitrogen Behaviour of Soil-Plant Systems. Wageningen, the Netherlands, pp. 127-144
61. J. van Veen, J. Ladd, and M. Frissel Modelling C and N turnover through the microbial biomass in soil Plant Soil 76 1984 257 274
62. P. Vitousek, J.D. Aber, R.W. Howarth, G.E. Likens, P.A. Matson, D.W. Schindler, W.H. Schlesinger, and D.G. Tilman Human alteration of the global nitrogen cycle: sources and consequences Ecol. Appl. 7 1997 737 750
63. R. Webster Quantitative spatial analysis of soil in the field Adv. Soil Sci. 3 1985 1 70
64. R. Webster, and T. Burgess Optimal interpolation and isarithmic mapping of soil properties, III. Changing drift and universal kriging J. Soil Sci. 31 1980 505 524
65. R. Webster, and T. Burgess Sampling and bulking strategies for estimating soil properties in small regions J. Soil Sci. 35 1984 127 140