메뉴 건너뛰기




Volumn 11, Issue 2, 2006, Pages 101-108

Why are plastid genomes retained in non-photosynthetic organisms?

Author keywords

[No Author keywords available]

Indexed keywords

GLUTAMIC ACID TRANSFER RNA; HEME; METHIONINE TRANSFER RNA; TRANSFER RNA;

EID: 32544451561     PISSN: 13601385     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.tplants.2005.12.004     Document Type: Review
Times cited : (163)

References (63)
  • 1
    • 0037327022 scopus 로고    scopus 로고
    • The symbiotic birth and spread of plastids: How many times and whodunit?
    • J.D. Palmer The symbiotic birth and spread of plastids: how many times and whodunit? J. Phycol. 39 2003 4 11
    • (2003) J. Phycol. , vol.39 , pp. 4-11
    • Palmer, J.D.1
  • 2
    • 0037388327 scopus 로고    scopus 로고
    • The Mesozoic radiation of eukaryotic algae: The portable plastid hypothesis
    • D. Grzebyk The Mesozoic radiation of eukaryotic algae: the portable plastid hypothesis J. Phycol. 39 2003 259 267
    • (2003) J. Phycol. , vol.39 , pp. 259-267
    • Grzebyk, D.1
  • 3
    • 0037126071 scopus 로고    scopus 로고
    • Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus
    • W. Martin Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus Proc. Natl. Acad. Sci. U. S. A. 99 2002 12246 12251
    • (2002) Proc. Natl. Acad. Sci. U. S. A. , vol.99 , pp. 12246-12251
    • Martin, W.1
  • 4
    • 1942422299 scopus 로고    scopus 로고
    • Dinoflagellate chloroplasts - Where have all the genes gone?
    • V.L. Koumandou Dinoflagellate chloroplasts - where have all the genes gone? Trends Genet. 20 2004 261 267
    • (2004) Trends Genet. , vol.20 , pp. 261-267
    • Koumandou, V.L.1
  • 5
    • 1942444640 scopus 로고    scopus 로고
    • Dinoflagellate expressed sequence tag data indicate massive transfer of chloroplast genes to the nuclear genome
    • T.R. Bachvaroff Dinoflagellate expressed sequence tag data indicate massive transfer of chloroplast genes to the nuclear genome Protist 155 2004 65 78
    • (2004) Protist , vol.155 , pp. 65-78
    • Bachvaroff, T.R.1
  • 6
    • 0034515977 scopus 로고    scopus 로고
    • Complete gene map of the plastid genome of the nonphotosynthetic euglenoid flagellate Astasia longa
    • G. Gockel, and W. Hachtel Complete gene map of the plastid genome of the nonphotosynthetic euglenoid flagellate Astasia longa Protist 151 2000 347 351
    • (2000) Protist , vol.151 , pp. 347-351
    • Gockel, G.1    Hachtel, W.2
  • 7
    • 0026447426 scopus 로고
    • Function and evolution of a minimal plastid genome from a nonphotosynthetic parasitic plant
    • K.H. Wolfe Function and evolution of a minimal plastid genome from a nonphotosynthetic parasitic plant Proc. Natl. Acad. Sci. U. S. A. 89 1992 10648 10652
    • (1992) Proc. Natl. Acad. Sci. U. S. A. , vol.89 , pp. 10648-10652
    • Wolfe, K.H.1
  • 8
    • 0031193640 scopus 로고    scopus 로고
    • Do non-asterid holoparasitic flowering plants have plastid genomes?
    • D.L. Nickrent Do non-asterid holoparasitic flowering plants have plastid genomes? Plant Mol. Biol. 34 1997 717 729
    • (1997) Plant Mol. Biol. , vol.34 , pp. 717-729
    • Nickrent, D.L.1
  • 9
    • 0021661754 scopus 로고
    • Chloroplast DNA deletions associated with wheat plants regenerated from pollen: Possible basis for maternal inheritance in chloroplasts
    • A. Day, and T.H.N. Ellis Chloroplast DNA deletions associated with wheat plants regenerated from pollen: possible basis for maternal inheritance in chloroplasts Cell 39 1984 359 368
    • (1984) Cell , vol.39 , pp. 359-368
    • Day, A.1    Ellis, T.H.N.2
  • 10
    • 0036678504 scopus 로고    scopus 로고
    • Large deletions in chloroplast DNA of rice calli after long-term culture
    • T. Abe Large deletions in chloroplast DNA of rice calli after long-term culture J. Plant Physiol. 159 2002 917 923
    • (2002) J. Plant Physiol. , vol.159 , pp. 917-923
    • Abe, T.1
  • 11
    • 0345307207 scopus 로고    scopus 로고
    • Maize BMS cultured cell lines survive with massive plastid gene loss
    • A.B. Cahoon Maize BMS cultured cell lines survive with massive plastid gene loss Curr. Genet. 44 2003 104 113
    • (2003) Curr. Genet. , vol.44 , pp. 104-113
    • Cahoon, A.B.1
  • 12
    • 0029781875 scopus 로고    scopus 로고
    • Transcription of tRNA genes from a large-scale plastid DNA deletion clearly reveals the action of nuclear-encoded RNA polymerase in the plastid
    • T. Chiba Transcription of tRNA genes from a large-scale plastid DNA deletion clearly reveals the action of nuclear-encoded RNA polymerase in the plastid J. Plant Physiol. 148 1996 652 656
    • (1996) J. Plant Physiol. , vol.148 , pp. 652-656
    • Chiba, T.1
  • 13
    • 13444301270 scopus 로고    scopus 로고
    • Parasite plastids: Approaching the endgame
    • R.J.M. Wilson Parasite plastids: approaching the endgame Biol. Rev. Camb. Philos. Soc. 80 2005 129 153
    • (2005) Biol. Rev. Camb. Philos. Soc. , vol.80 , pp. 129-153
    • Wilson, R.J.M.1
  • 14
    • 0026787291 scopus 로고
    • Plastid origin of an extrachromosomal DNA molecule from Plasmodium, the causative agent of malaria
    • C.J. Howe Plastid origin of an extrachromosomal DNA molecule from Plasmodium, the causative agent of malaria J. Theor. Biol. 158 1992 199 205
    • (1992) J. Theor. Biol. , vol.158 , pp. 199-205
    • Howe, C.J.1
  • 16
    • 11144351763 scopus 로고    scopus 로고
    • Identification of chloroplast signal recognition particle RNA genes
    • M.A. Rosenblad, and T. Samuelsson Identification of chloroplast signal recognition particle RNA genes Plant Cell Physiol. 45 2004 1633 1639
    • (2004) Plant Cell Physiol. , vol.45 , pp. 1633-1639
    • Rosenblad, M.A.1    Samuelsson, T.2
  • 17
    • 0242577547 scopus 로고    scopus 로고
    • A structural and functional study of plastid RNAs homologous to catalytic bacterial RNase P RNA
    • J. de la Cruz, and A. Vioque A structural and functional study of plastid RNAs homologous to catalytic bacterial RNase P RNA Gene 321 2003 47 56
    • (2003) Gene , vol.321 , pp. 47-56
    • De La Cruz, J.1    Vioque, A.2
  • 18
    • 27244457663 scopus 로고    scopus 로고
    • The rice nuclear genome continuously integrates, shuffles, and eliminates the chloroplast genome to cause chloroplast-nuclear DNA flux
    • M. Matsuo The rice nuclear genome continuously integrates, shuffles, and eliminates the chloroplast genome to cause chloroplast-nuclear DNA flux Plant Cell 17 2005 665 675
    • (2005) Plant Cell , vol.17 , pp. 665-675
    • Matsuo, M.1
  • 19
    • 19844382575 scopus 로고    scopus 로고
    • Generation and evolutionary fate of insertions of organelle DNA in the nuclear genomes of flowering plants
    • C. Noutsos Generation and evolutionary fate of insertions of organelle DNA in the nuclear genomes of flowering plants Genome Res. 15 2005 616 628
    • (2005) Genome Res. , vol.15 , pp. 616-628
    • Noutsos, C.1
  • 20
    • 4944253274 scopus 로고    scopus 로고
    • NUPTs in sequenced eukaryotes and their genomic organization in relation to NUMTs
    • E. Richly, and D. Leister NUPTs in sequenced eukaryotes and their genomic organization in relation to NUMTs Mol. Biol. Evol. 21 2004 1972 1980
    • (2004) Mol. Biol. Evol. , vol.21 , pp. 1972-1980
    • Richly, E.1    Leister, D.2
  • 21
    • 0032740766 scopus 로고    scopus 로고
    • The mitochondrial genome of Arabidopsis is composed of both native and immigrant information
    • J. Marienfeld The mitochondrial genome of Arabidopsis is composed of both native and immigrant information Trends Plant Sci. 4 1999 495 502
    • (1999) Trends Plant Sci. , vol.4 , pp. 495-502
    • Marienfeld, J.1
  • 22
    • 0031665151 scopus 로고    scopus 로고
    • A subset of conserved tRNA genes in plastid DNA of nongreen plants
    • A.J. Lohan, and K.H. Wolfe A subset of conserved tRNA genes in plastid DNA of nongreen plants Genetics 150 1998 425 433
    • (1998) Genetics , vol.150 , pp. 425-433
    • Lohan, A.J.1    Wolfe, K.H.2
  • 23
    • 0034578344 scopus 로고    scopus 로고
    • Mitochondrial tRNA import: Are there distinct mechanisms?
    • A. Schneider, and L. Maréchal-Drouard Mitochondrial tRNA import: are there distinct mechanisms? Trends Cell Biol. 10 2000 509 513
    • (2000) Trends Cell Biol. , vol.10 , pp. 509-513
    • Schneider, A.1    Maréchal-Drouard, L.2
  • 24
    • 0032544070 scopus 로고    scopus 로고
    • A novel signal recognition particle targets light-harvesting proteins to the thylakoid membranes
    • D. Schuenemann A novel signal recognition particle targets light-harvesting proteins to the thylakoid membranes Proc. Natl. Acad. Sci. U. S. A. 95 1998 10312 10316
    • (1998) Proc. Natl. Acad. Sci. U. S. A. , vol.95 , pp. 10312-10316
    • Schuenemann, D.1
  • 25
    • 0030292241 scopus 로고    scopus 로고
    • Glutamyl-transfer RNA: At the crossroad between chlorophyll and protein biosynthesis
    • A.M. Kumar Glutamyl-transfer RNA: at the crossroad between chlorophyll and protein biosynthesis Trends Plant Sci. 1 1996 371 376
    • (1996) Trends Plant Sci. , vol.1 , pp. 371-376
    • Kumar, A.M.1
  • 26
    • 0001017338 scopus 로고
    • Plants without chlorophyll
    • C.J. Howe, and A.G. Smith Plants without chlorophyll Nature 349 1991 109
    • (1991) Nature , vol.349 , pp. 109
    • Howe, C.J.1    Smith, A.G.2
  • 27
    • 0032903448 scopus 로고    scopus 로고
    • Organellar RNA polymerases of higher plants
    • W.R. Hess, and T. Borner Organellar RNA polymerases of higher plants Int. Rev. Cytol. 190 1999 1 59
    • (1999) Int. Rev. Cytol. , vol.190 , pp. 1-59
    • Hess, W.R.1    Borner, T.2
  • 28
    • 0036696017 scopus 로고    scopus 로고
    • The transcriptional apparatus of algal plastids
    • A.C. Smith, and S. Purton The transcriptional apparatus of algal plastids Eur. J. Phycol. 37 2002 301 311
    • (2002) Eur. J. Phycol. , vol.37 , pp. 301-311
    • Smith, A.C.1    Purton, S.2
  • 29
    • 0020050564 scopus 로고
    • Mutants of Chlamydomonas reinhardtii with physical alterations in their chloroplast DNA
    • A.M. Myers Mutants of Chlamydomonas reinhardtii with physical alterations in their chloroplast DNA Plasmid 7 1982 133 151
    • (1982) Plasmid , vol.7 , pp. 133-151
    • Myers, A.M.1
  • 30
    • 0036845754 scopus 로고    scopus 로고
    • The Chlamydomonas reinhardtii plastid chromosome: Islands of genes in a sea of repeats
    • J.E. Maul The Chlamydomonas reinhardtii plastid chromosome: islands of genes in a sea of repeats Plant Cell 14 2002 2659 2679
    • (2002) Plant Cell , vol.14 , pp. 2659-2679
    • Maul, J.E.1
  • 32
    • 1542314443 scopus 로고    scopus 로고
    • Photosynthetic evolution in parasitic plants: Insight from the chloroplast genome
    • R.A. Bungard Photosynthetic evolution in parasitic plants: insight from the chloroplast genome BioEssays 26 2004 235 247
    • (2004) BioEssays , vol.26 , pp. 235-247
    • Bungard, R.A.1
  • 33
    • 5644295425 scopus 로고    scopus 로고
    • Mitochondrial tRNA import in Toxoplasma gondii
    • A.C. Esseiva Mitochondrial tRNA import in Toxoplasma gondii J. Biol. Chem. 279 2004 42363 42368
    • (2004) J. Biol. Chem. , vol.279 , pp. 42363-42368
    • Esseiva, A.C.1
  • 34
    • 0028125575 scopus 로고
    • Initiator transfer RNAs
    • U.L. Rajbhandary Initiator transfer RNAs J. Bacteriol. 176 1994 547 552
    • (1994) J. Bacteriol. , vol.176 , pp. 547-552
    • Rajbhandary, U.L.1
  • 35
    • 0037022225 scopus 로고    scopus 로고
    • Met of Trypanosoma brucei becomes formylated after import into mitochondria
    • Met of Trypanosoma brucei becomes formylated after import into mitochondria Proc. Natl. Acad. Sci. U. S. A. 99 2002 1152 1157
    • (2002) Proc. Natl. Acad. Sci. U. S. A. , vol.99 , pp. 1152-1157
    • Tan, T.H.P.1
  • 36
    • 0033213013 scopus 로고    scopus 로고
    • The plastid in Plasmodium falciparum. Asexual blood stages: A three-dimensional ultrastructural analysis
    • J. Hopkins The plastid in Plasmodium falciparum. Asexual blood stages: a three-dimensional ultrastructural analysis Protist 150 1999 283 295
    • (1999) Protist , vol.150 , pp. 283-295
    • Hopkins, J.1
  • 37
    • 22144494182 scopus 로고    scopus 로고
    • Development of the endoplasmic reticulum, mitochondrion and apicoplast during the asexual life cycle of Plasmodium falciparum
    • G.G. van Dooren Development of the endoplasmic reticulum, mitochondrion and apicoplast during the asexual life cycle of Plasmodium falciparum Mol. Microbiol. 57 2005 405 419
    • (2005) Mol. Microbiol. , vol.57 , pp. 405-419
    • Van Dooren, G.G.1
  • 38
    • 10944243685 scopus 로고    scopus 로고
    • Mitochondria of protists
    • M.W. Gray Mitochondria of protists Annu. Rev. Genet. 38 2004 477 524
    • (2004) Annu. Rev. Genet. , vol.38 , pp. 477-524
    • Gray, M.W.1
  • 39
    • 0032877639 scopus 로고    scopus 로고
    • Chloroplast suppressors that act on a mitochondrial mutation in Chlamydomonas reinhardtii
    • P. Bennoun, and M. Delosme Chloroplast suppressors that act on a mitochondrial mutation in Chlamydomonas reinhardtii Mol. Gen. Genet. 262 1999 85 89
    • (1999) Mol. Gen. Genet. , vol.262 , pp. 85-89
    • Bennoun, P.1    Delosme, M.2
  • 40
    • 21644437935 scopus 로고    scopus 로고
    • Genome sequence of Theileria parva, a bovine pathogen that transforms lymphocytes
    • M.J. Gardner Genome sequence of Theileria parva, a bovine pathogen that transforms lymphocytes Science 309 2005 134 137
    • (2005) Science , vol.309 , pp. 134-137
    • Gardner, M.J.1
  • 41
    • 0242493260 scopus 로고    scopus 로고
    • Apicoplast genome of the coccidian Eimeria tenella
    • X. Cai Apicoplast genome of the coccidian Eimeria tenella Gene 321 2003 39 46
    • (2003) Gene , vol.321 , pp. 39-46
    • Cai, X.1
  • 42
    • 0141991994 scopus 로고    scopus 로고
    • DNA transfer from chloroplast to nucleus is much rarer in Chlamydomonas than in tobacco
    • D.L. Lister DNA transfer from chloroplast to nucleus is much rarer in Chlamydomonas than in tobacco Gene 316 2003 33 38
    • (2003) Gene , vol.316 , pp. 33-38
    • Lister, D.L.1
  • 43
    • 0035283304 scopus 로고    scopus 로고
    • Reducing the genome size of organelles favours gene transfer to the nucleus
    • M. Selosse Reducing the genome size of organelles favours gene transfer to the nucleus Trends Ecol. Evol. 16 2001 135 141
    • (2001) Trends Ecol. Evol. , vol.16 , pp. 135-141
    • Selosse, M.1
  • 44
    • 0032404453 scopus 로고    scopus 로고
    • You are what you eat: A gene transfer ratchet could account for bacterial genes in eukaryotic nuclear genomes
    • W.F. Doolittle You are what you eat: a gene transfer ratchet could account for bacterial genes in eukaryotic nuclear genomes Trends Genet. 14 1998 307 311
    • (1998) Trends Genet. , vol.14 , pp. 307-311
    • Doolittle, W.F.1
  • 45
    • 0242669385 scopus 로고    scopus 로고
    • Direct measurement of the transfer rate of chloroplast DNA into the nucleus
    • C.Y. Huang Direct measurement of the transfer rate of chloroplast DNA into the nucleus Nature 422 2003 72 76
    • (2003) Nature , vol.422 , pp. 72-76
    • Huang, C.Y.1
  • 46
    • 0042760348 scopus 로고    scopus 로고
    • High-frequency gene transfer from the chloroplast genome to the nucleus
    • S. Stegemann High-frequency gene transfer from the chloroplast genome to the nucleus Proc. Natl. Acad. Sci. U. S. A. 100 2003 8828 8833
    • (2003) Proc. Natl. Acad. Sci. U. S. A. , vol.100 , pp. 8828-8833
    • Stegemann, S.1
  • 47
    • 0016785846 scopus 로고
    • Evolution of organelles and eukaryotic genomes
    • L. Bogorad Evolution of organelles and eukaryotic genomes Science 188 1975 891 898
    • (1975) Science , vol.188 , pp. 891-898
    • Bogorad, L.1
  • 48
    • 0022532186 scopus 로고
    • Why mitochondria need a genome
    • G. von Heijne Why mitochondria need a genome FEBS Lett. 198 1986 1 4
    • (1986) FEBS Lett. , vol.198 , pp. 1-4
    • Von Heijne, G.1
  • 49
    • 0001391343 scopus 로고
    • Relocating a gene for herbicide tolerance: A chloroplast gene is converted into a nuclear gene
    • A.Y. Cheung Relocating a gene for herbicide tolerance: a chloroplast gene is converted into a nuclear gene Proc. Natl. Acad. Sci. U. S. A. 85 1988 391 395
    • (1988) Proc. Natl. Acad. Sci. U. S. A. , vol.85 , pp. 391-395
    • Cheung, A.Y.1
  • 50
    • 0028264871 scopus 로고
    • Relocation of the plastid rbcL gene to the nucleus yields functional ribulose 1,5-bisphosphate carboxylase in tobacco chloroplasts
    • I. Kanevski, and P. Maliga Relocation of the plastid rbcL gene to the nucleus yields functional ribulose 1,5-bisphosphate carboxylase in tobacco chloroplasts Proc. Natl. Acad. Sci. U. S. A. 91 1994 1969 1973
    • (1994) Proc. Natl. Acad. Sci. U. S. A. , vol.91 , pp. 1969-1973
    • Kanevski, I.1    Maliga, P.2
  • 51
    • 33744638372 scopus 로고    scopus 로고
    • Why genes persist in organelle genomes
    • 10.1186/gb-2005-6-5-110
    • D.O. Daley, and J. Whelan Why genes persist in organelle genomes Genome Biol. 6 2005 110 10.1186/gb-2005-6-5-110 (http://genomebiology.com/ )
    • (2005) Genome Biol. , vol.6 , pp. 110
    • Daley, D.O.1    Whelan, J.2
  • 52
  • 53
    • 0036551096 scopus 로고    scopus 로고
    • Does complexity constrain organelle evolution?
    • W. Zerges Does complexity constrain organelle evolution? Trends Plant Sci. 7 2002 175 182
    • (2002) Trends Plant Sci. , vol.7 , pp. 175-182
    • Zerges, W.1
  • 54
    • 17844382664 scopus 로고    scopus 로고
    • Forces maintaining organellar genomes: Is any as strong as genetic code disparity or hydrophobicity?
    • A.D.N.J. de Grey Forces maintaining organellar genomes: is any as strong as genetic code disparity or hydrophobicity? BioEssays 27 2005 436 446
    • (2005) BioEssays , vol.27 , pp. 436-446
    • De Grey, A.D.N.J.1
  • 55
    • 0034821617 scopus 로고    scopus 로고
    • Comparative analysis of RNA editing sites in higher plant chloroplasts
    • T. Tsudzuki Comparative analysis of RNA editing sites in higher plant chloroplasts J. Mol. Evol. 53 2001 327 332
    • (2001) J. Mol. Evol. , vol.53 , pp. 327-332
    • Tsudzuki, T.1
  • 56
    • 8844264552 scopus 로고    scopus 로고
    • Substitutional editing of transcripts from genes of cyanobacterial origin in the dinoflagellate Ceratium horridum
    • S. Zauner Substitutional editing of transcripts from genes of cyanobacterial origin in the dinoflagellate Ceratium horridum FEBS Lett. 577 2004 535 538
    • (2004) FEBS Lett. , vol.577 , pp. 535-538
    • Zauner, S.1
  • 57
  • 58
    • 0036153598 scopus 로고    scopus 로고
    • Evaluation of two biosynthetic pathways to δ-aminolevulinic acid in Euglena gracilis
    • K. Iida Evaluation of two biosynthetic pathways to δ-aminolevulinic acid in Euglena gracilis Eur. J. Biochem. 269 2002 291 297
    • (2002) Eur. J. Biochem. , vol.269 , pp. 291-297
    • Iida, K.1
  • 59
    • 0033965297 scopus 로고    scopus 로고
    • Cryptosporidium parvum appears to lack a plastid genome
    • G. Zhu Cryptosporidium parvum appears to lack a plastid genome Microbiology 146 2000 315 321
    • (2000) Microbiology , vol.146 , pp. 315-321
    • Zhu, G.1
  • 60
    • 11144353587 scopus 로고    scopus 로고
    • Complete genome sequence of the apicomplexan Cryptosporidium parvum
    • M.S. Abrahamsen Complete genome sequence of the apicomplexan Cryptosporidium parvum Science 304 2004 441 445
    • (2004) Science , vol.304 , pp. 441-445
    • Abrahamsen, M.S.1
  • 61
    • 0032211044 scopus 로고    scopus 로고
    • Plastids are widespread and ancient in parasites of the phylum Apicomplexa
    • N. Lang-Unnasch Plastids are widespread and ancient in parasites of the phylum Apicomplexa Int. J. Parasitol. 28 1998 1743 1754
    • (1998) Int. J. Parasitol. , vol.28 , pp. 1743-1754
    • Lang-Unnasch, N.1
  • 62
    • 3042761250 scopus 로고    scopus 로고
    • Myco-heterotroph/epiparasitic plant interactions with ectomycorrhizal and arbuscular mycorrhizal fungi
    • J.R. Leake Myco-heterotroph/epiparasitic plant interactions with ectomycorrhizal and arbuscular mycorrhizal fungi Curr. Opin. Plant Biol. 7 2004 422 428
    • (2004) Curr. Opin. Plant Biol. , vol.7 , pp. 422-428
    • Leake, J.R.1
  • 63
    • 22144433358 scopus 로고    scopus 로고
    • Glutamyl-tRNA mediates a switch in RNA polymerase use during chloroplast biogenesis
    • M. Hanaoka Glutamyl-tRNA mediates a switch in RNA polymerase use during chloroplast biogenesis EMBO Rep. 6 2005 545 550
    • (2005) EMBO Rep. , vol.6 , pp. 545-550
    • Hanaoka, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.