Genetic analysis of invasive plant populations at different spatial scales

Biological Invasions

Volumn 8, Issue 3, 2006, Pages 541-552

  Ward, Sarah ^a  

^a Department of Environmental and Radiological Health Sciences   (United States)

Author keywords

Environmental heterogeneity; Gene flow; Genetic analysis; Genetic drift; Genetic structuring; Invasive plants; Molecular markers; Selection; Spatial scale

Indexed keywords

BIOLOGICAL INVASION; GENE FLOW; POPULATION GENETICS; SPATIAL ANALYSIS;

EID: 32544448967     PISSN: 13873547     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10530-005-6443-8     Document Type: Review

References (69)

1. SAK Al-Hiyaly T [tmp] McNeilly AD Bradshaw AM Mortimer 1993 The effect of zinc contamination from electricity pylons: genetic constraints on selection for zinc tolerance Heredity 70 22 32
2. L Amsellem JL Noyer T Le Bourgeois M Hossaert-McKey 2000 Comparison of genetic diversity of the invasive weed Rubus alceifolius Poir. (Rosaceae) in its native range and in areas of introduction, using amplified fragment length polymorphism (AFLP) markers Molecular Ecology 9 443 455
3. DR Ayres DR Strong 2001 Origin and genetic diversity of Spartina anglica (Poaceae) using nuclear DNA markers American Journal of Botany 88 1863 1867
4. DT Barnett TJ Stohlgren 2003 A nested-intensity design for surveying plant diversity Biodiversity and Conservation 12 255 278
5. E Bartlett SJ Novak RN Mack 2002 Genetic variation in Bromus tectorum: differentiation in the eastern United States American Journal of Botany 89 602 212
6. MC Carter MD Sytsma 2001 Comparison of the genetic structure of North and South American populations of a clonal aquatic plant Biological Invasions 3 113 118
7. MG Chung 1999 Spatial genetic structure in a population of the endangered Korean plant Abeliophyllum distichum (Oleaceae) Belgian Journal of Botany 132 26 30
8. MG Chung BK Epperson 1999 Spatial genetic structure of clonal and sexual reproduction in populations of Adenophora granidflora (Campanulaceae) Evolution 53 1068 1078
9. MJ Crawley JE Harral 2001 Scale dependence in plant biodiversity Science 291 864 868
10. R Dawkins 1982 The Extended Phenotype: The Gene as the Unit of Selection W.H. Freeman Oxford, England
11. RA Ennos 1994 Estimating the relative rates of pollen and seed migration among plant populations Heredity 72 250 259
12. BK Epperson 1990 Spatial autocorrelation of genotypes under directional selection Genetics 124 757 771
13. T Fukuda J Yokohama H Ohashi 2001 Phylogeny and biogeography of the genus Lycium (Solanaceae): inferences from chloroplast DNA Molecular Phylogenetics and Evolution 19 246 258
14. I Gamache JP Jaramillo-Correa S Payette J Bousquet 2003 Diverging patterns of mitochondrial and nuclear diversity in subarctic black spruce: imprint of a founder effect associated with postglacial colonization Molecular Ecology 12 891 901
15. AC Grice IJ Radford BN Abbott 2000 Regional and landscape-scale patterns of shrub invasion in tropical savannahs Biological Invasions 2 187 205
16. DL Gustine DR Huff 1999 Genetic variation within and among white clover populations from managed permanent pastures of the northeastern USA Crop Science 39 524 530
17. DL Gustine MA Sanderson 2001 Quantifying spatial and temporal genetic changes in white clover populations by RAPD technology Crop Science 41 143 148
18. JL Hamrick MJ Godt 1983 The distribution of genetic variation within and among natural plant populations CM Shonewald-Cox SM Chambers B [tmp] MacBryde L Thomas Genetics and Conservation. Benjamin Cummings Menlo Park, CA 335 348
19. JL Hamrick MJ Godt 1996 Effects of life history traits on genetic diversity in plant species Philosophical Transactions of the Royal Society of London B 351 1291 1298
20. JL Hamrick MJ Godt SL Sherman-Broyles 1992 Factors influencing levels of genetic diversity in woody plant species New Forestry 6 95 124
21. IA Hanski DS Simberloff 1997 The metapopulation approach, its history, conceptual domain and application to conservation IA Hanski ME Gilpin Metapopulation Biology: Ecology, Genetics and Evolution Academic Press San Diego, CA 5 26
22. GH Hewitt 1996 Some genetic consequences of ice ages, and their role in divergence and speciation Biological Journal of the Linnean Society 58 247 276
23. JS Heywood 1991 Spatial analysis of genetic variation in plant populations Annual Review of Ecology and Systematics 22 335 355
24. JCE Hubbard 1965 Spartina marshes in southern England. VI. Pattern of invasion in Poole Harbour Journal of Ecology 53 799 813
25. GE Hutchinson 1953 The concept of pattern in ecology Proceedings of the National Academy of Sciences 105 1 12
26. M Jasieniuk BD Maxwell 2001 Plant diversity: new insights from molecular biology and genomics technologies Weed Science 49 257 265
27. Y Jin T He B-R Lu 2003 Fine scale genetic structure in a wild soybean (Glycine soja) population and the implications for conservation New Phytologist 159 513 519
28. M Kimura 1983 The Neutral Theory of Molecular Evolution Cambridge University Press Cambridge, MA 367
29. SA Levin 1992 The problem of pattern and scale in ecology Ecology 73 1943 1967
30. C Lian R Oishi N Miyashita T Hogetsu 2004 High somatic instability of a microsatellite locus in a clonal tree, Robinia pseudoacacia Theoretical and Applied Genetics 108 836 841
31. YB Linhart MC Grant 1996 Evolutionary significance of local genetic differentiation in plants Annual Review of Ecology and Systematics 27 237 277
32. M Lynch 1991 The genetic interpretation of inbreeding depression and outbreeding depression Evolution 45 622 629
33. RN Mack WM Lonsdale 2001 Humans as global plant dispersers: getting more than we bargained for BioScience 51 95 102
34. CJ Marchant 1968 Evolution in Spartina (Gramineae). II. Chromosomes, basic relationships and the problems of S. x townsendii agg Botanical Journal of the Linnean Society 60 381 409
35. J Maynard Smith JH Haigh 1974 The hitch-hiking effect of a favorable gene Genetic Research 23 23 35
36. JF Meekins HE Ballard BC [tmp] McCarthy 2001 Genetic variation and molecular biogeography of a North American invasive plant species (Alliaria petiolata, Brassicaceae) International Journal of Plant Science 162 161 169
37. A Mengoni C Gonnelli F Galardi R Gabbrielli M Bazzicalupo 2000 Genetic diversity and heavy metal tolerance in populations of Silene paradoxa L.(Caryophyllaceae): a random amplified polymorphic DNA analysis Molecular Ecology 9 1319 1324
38. SJ Nissen RA Masters DJ Lee ML Rowe 1992 Comparison of restriction-fragment-length-polymorphisms in chloroplast DNA of 5 leafy spurge (Euphorbia spp.) accessions Weed Science 40 63 67
39. SJ Novak RN Mack 1993 Genetic variation in Bromus tectorum (Poaceae): comparison between native and introduced populations Heredity 71 167 176
40. SJ Novak RN Mack 2001 Tracing plant introduction and spread: genetic evidence from Bromus tectorum (cheatgrass) BioScience 51 114 122
41. PC O'Hanlon R Peakall DT Briese 2000 A review of new PCR-based genetic markers and their utility to weed ecology Weed Research 40 239 254
42. PG Parker AA Snow MD Schug GC Booton PA Fuerst 1998 What molecules can tell us about populations: choosing and using a molecular marker Ecology 7 361 382
43. A Pauchard K Shea 2006 Integrating the study of non-native plant invasions across spatial scales Biological Invasions 8 415 429
44. TA Pester SM Ward AL Fenwick P Westra SJ Nissen 2003 Genetic diversity of jointed goatgrass (Aegilops cyclindrica) determined with RAPD andAFLP markers Weed Science 51 287 293
45. RJ Petit 2004 Biological invasions at the gene level Diversity and Distributions 10 159 165
46. TM Powell 1989 Physical and biological scales of variability in lakes, estuaries and the coastal ocean J Roughgarden RM May SA Levin Perspectives in Theoretical Ecology Princeton University Press Princeton, NJ 157 180
47. DH Reed R Frankham 2001 How closely correlated are molecular and quantitative measures of genetic variation? A meta-analysis Evolution 55 1095 1103
48. CM Richard 2000 Genetic and demographic influences on population persistence: gene flow and genetic rescue in Silene alba AG Young GM Clarke Genetics, Demography and Viability of Fragmented Populations Cambridge University Press Cambridge 271 292
49. SH Rogstad B Keane J Beresh 2001 Genetic variation across VNTR loci in central North American Taraxacum surveyed at different spatial scales Plant Ecology 161 111 121
50. ML Rowe DJ Lee SJ Nissen BM Bowditch RA Masters 1997 Genetic variation in North American leafy spurge (Euphorbia esula) determined by DNA markers Weed Science 45 446 454
51. K Saltonstall 2002 Cryptic invasion by a non-native genotype of the common reed, Phragmites australis, into North America Proceedings of the National Aacdemy of Sciences 99 2445 2449
52. AJ Shaw CJ Cox SB Boles 2003 Global patterns in peatmoss biodiversity Molecular Ecology 12 2553 2570
53. M Slatkin 1993 Isolation by distance in equilibrium and non-equilibrium populations Evolution 47 264 279
54. M Slatkin T Wiehe 1998 Genetic hitch-hiking in a sub-divided population Genetic Research 71 155 160
55. PE Smouse R Peakall 1999 Spatial autocorrelation analysis of individual multiallele and multilocus genetic structure Heredity 82 561 573
56. I Stehlik R Holderegger 2000 Spatial genetic structure and clonal diversity of Anemone nemorosa in late successional deciduous woodlands of Central Europe Journal of Ecology 88 424 435
57. V Sork J Nason DR Campbell JF Fernandez 1999 Landscape approaches to historical and contemporary gene flow in plants Trends in Ecology and Evolution 14 219 224
58. O Stapf 1913 Townsend's grass or rice grass Proceedings of the Bournemouth Natural Science Society 5 76 82
59. TJ Stohlgren GW Chong LD Schell KA Rimar Y Otsuki M Lee MA Kalkhan CA Villa 2002 Assessing vulnerability to invasion by nonnative plant species at multiple spatial scales Environmental Management 29 566 577
60. T Torimaru N Tomimaru N Ishimura S Yamamoto 2003 Clonal diversity and genetic differentiaton in Ilex leucoclada M. patches in an old-growth beech forest Molecular Ecology 12 809 818
61. PJ Tranel JJ Wassom 2001 Genetic relationships of common cocklebur accessions from the United States Weed Science 49 318 325
62. ME Turner JC Stephens WW Anderson 1982 Homozygosity and patch structure in plant populations as a result of nearest-neighbor pollination Proceedings of the National Academy of Sciences 79 203 207
63. PH van Tienderen AA de Haan CG van der Linden B Vosman 2002 Biodiversity assessment using markers for ecologically important traits Trends in Ecology and Evolution 17 577 582
64. X Vekemans OJ Hardy 2004 New insights from fine-scale spatial genetic structure analyses in plant populations Molecular Ecology 13 921 935
65. R Vitalis K Dawson P Boursot 2001 Interpretation of variation across marker loci as evidence of selection Genetics 158 1811 1823
66. N Waser MV Price 1994 Crossing distance effects in Delphinium nelsonii: outbreeding and inbreeding depression in progeny fitness Evolution 48 842 852
67. KJ Willis RJ Whittaker 2002 Enhanced species diversity - scale matters Science 295 1245 1248
68. S Wright 1943 Isolation by distance Genetics 28 114 138
69. S Wright 1951 The genetical structure of populations Annals of Eugenics 15 323 354