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Volumn 32, Issue WEB SERVER ISS., 2004, Pages

ProteinDBS: A real-time retrieval system for protein structure comparison

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID;

EID: 3242888280     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/gkh436     Document Type: Article
Times cited : (26)

References (16)
  • 1
    • 0014757386 scopus 로고
    • A general method applicable to the search for similarities in the amino acid sequence of two proteins
    • Needleman,S.B. and Wunsch,C.D. (1970) A general method applicable to the search for similarities in the amino acid sequence of two proteins. J. Mol. Biol., 48, 443-453.
    • (1970) J. Mol. Biol. , vol.48 , pp. 443-453
    • Needleman, S.B.1    Wunsch, C.D.2
  • 2
    • 0019887799 scopus 로고
    • Identification of common molecular subsequences
    • Smith,T.F. and Waterman,M.S. (1970) Identification of common molecular subsequences. J. Mol. Biol., 147, 195-197.
    • (1970) J. Mol. Biol. , vol.147 , pp. 195-197
    • Smith, T.F.1    Waterman, M.S.2
  • 3
    • 0027440362 scopus 로고
    • Protein structure comparison by alignment of distance matrices
    • Holm,L. and Sander,C. (1993) Protein structure comparison by alignment of distance matrices. J. Mol. Biol., 233, 123-138.
    • (1993) J. Mol. Biol. , vol.233 , pp. 123-138
    • Holm, L.1    Sander, C.2
  • 4
    • 0031715982 scopus 로고    scopus 로고
    • Protein structure alignment by incremental combinatorial extension (CE) of the optimal path
    • Shindyalov,H.N. and Bourne,P.E. (1998) Protein structure alignment by incremental combinatorial extension (CE) of the optimal path. Protein Eng., 9, 739-747.
    • (1998) Protein Eng. , vol.9 , pp. 739-747
    • Shindyalov, H.N.1    Bourne, P.E.2
  • 5
    • 0029982530 scopus 로고    scopus 로고
    • The structural alignment between two proteins: Is there a unique answer?
    • Godzik,A. (1996) The structural alignment between two proteins: is there a unique answer? Protein Sci., 5, 1325-1338.
    • (1996) Protein Sci. , vol.5 , pp. 1325-1338
    • Godzik, A.1
  • 6
    • 33750563354 scopus 로고    scopus 로고
    • CTSS: A robust and efficient method for protein structure alignment based on local geometrical and biological features
    • Proceedings of the IEEE Computer Society Conference on Bioinformatics, August 2003
    • Can,T. and Wang,Y.F. (2003) CTSS: a robust and efficient method for protein structure alignment based on local geometrical and biological features. Proceedings of the IEEE Computer Society Conference on Bioinformatics, August 2003, pp. 169-179.
    • (2003) , pp. 169-179
    • Can, T.1    Wang, Y.F.2
  • 7
    • 2442694738 scopus 로고    scopus 로고
    • PSI: Indexing protein structures for fast similarity search
    • Camogla,O., Kahveci,J. and Singh,A. (2003) PSI: indexing protein structures for fast similarity search. Bioinformatics, 19(Suppl. 1), I81-I83.
    • (2003) Bioinformatics , vol.19 , Issue.SUPPL. 1
    • Camogla, O.1    Kahveci, J.2    Singh, A.3
  • 8
    • 84942575916 scopus 로고    scopus 로고
    • Augmenting SSEs with structural properties for rapid protein structure comparison
    • Proceedings of the Third IEEE Symposium on Bioinformatics and Bioengineering
    • Chionh,C.H., Huang,Z., Tan,K.L., and Yao,Z. (2003) Augmenting SSEs with structural properties for rapid protein structure comparison, Proceedings of the Third IEEE Symposium on Bioinformatics and Bioengineering, pp. 341-348.
    • (2003) , pp. 341-348
    • Chionh, C.H.1    Huang, Z.2    Tan, K.L.3    Yao, Z.4
  • 9
    • 4544307935 scopus 로고    scopus 로고
    • A fast protein structure retrieval system using image-based distance matrices and multidimensional index
    • Proceedings of the Fourth IEEE Symposium on Bioinformatics and Bioengineering
    • Chi,P.H., Scott,G. and Shyu,C.R. (2004) A fast protein structure retrieval system using image-based distance matrices and multidimensional index, Proceedings of the Fourth IEEE Symposium on Bioinformatics and Bioengineering.
    • (2004)
    • Chi, P.H.1    Scott, G.2    Shyu, C.R.3
  • 12
    • 35248891144 scopus 로고    scopus 로고
    • EBS k-d tree - An entropy balanced statistical k-d tree for image databases with ground-truth labels'
    • Proceedings of the International Conference on Image and Video Retrieval, Urbana-Champaign, IL, 24-25 July
    • Scott,G. and Shyu,C.R. (2003) EBS k-d tree - an entropy balanced statistical k-d tree for image databases with ground-truth labels'. Proceedings of the International Conference on Image and Video Retrieval, Urbana-Champaign, IL, 24-25 July, pp. 467-476.
    • (2003) , pp. 467-476
    • Scott, G.1    Shyu, C.R.2
  • 13
    • 0033352578 scopus 로고    scopus 로고
    • Remote method invocation based Web database system for global environment models
    • IEEE SMC'99 Conference Proceedings
    • Ro,Y., Tsuchida,S., Tamura,M., Nagata,M. and Nakamori,Y. (1999) Remote method invocation based Web database system for global environment models. IEEE SMC'99 Conference Proceedings. pp. 563-568.
    • (1999) , pp. 563-568
    • Ro, Y.1    Tsuchida, S.2    Tamura, M.3    Nagata, M.4    Nakamori, Y.5
  • 14
    • 0029796428 scopus 로고    scopus 로고
    • SARFing the PDB
    • Alexandrov,N.N. (1996) SARFing the PDB. Protein Eng., 9, 727-732.
    • (1996) Protein Eng. , vol.9 , pp. 727-732
    • Alexandrov, N.N.1
  • 15
    • 0030815133 scopus 로고    scopus 로고
    • Raster3D photorealistic molecular graphics
    • Merritt,E.A. and Bacon,D.J. (1997) Raster3D photorealistic molecular graphics. Methods Enzymol., 277, 505-524.
    • (1997) Methods Enzymol. , vol.277 , pp. 505-524
    • Merritt, E.A.1    Bacon, D.J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.