메뉴 건너뛰기




Volumn 44, Issue 2, 2006, Pages 495-503

Multilocus microsatellite typing as a new tool for discrimination of Leishmania infantum MON-1 strains

Author keywords

[No Author keywords available]

Indexed keywords

DNA;

EID: 32344451312     PISSN: 00951137     EISSN: None     Source Type: Journal    
DOI: 10.1128/JCM.44.2.495-503.2006     Document Type: Article
Times cited : (92)

References (60)
  • 1
    • 0029879351 scopus 로고    scopus 로고
    • Random amplified polymorphic DNA for the differentiation of Leishmania donovani isolates from Sudan
    • Andresen, K., M. E. Ibrahim, T. G. Theander, and A. Kharazmi. 1996. Random amplified polymorphic DNA for the differentiation of Leishmania donovani isolates from Sudan. Trans. R. Soc. Trop. Med. Hyg. 90:204-205.
    • (1996) Trans. R. Soc. Trop. Med. Hyg. , vol.90 , pp. 204-205
    • Andresen, K.1    Ibrahim, M.E.2    Theander, T.G.3    Kharazmi, A.4
  • 2
    • 0033709808 scopus 로고    scopus 로고
    • The leishmaniases as emerging and reemerging zoonoses
    • Ashford, R. W. 2000. The leishmaniases as emerging and reemerging zoonoses. Int. J. Parasitol. 30:1269-1281.
    • (2000) Int. J. Parasitol. , vol.30 , pp. 1269-1281
    • Ashford, R.W.1
  • 6
    • 0028784625 scopus 로고
    • Intergenic region typing (IRT): A rapid molecular approach to the characterization and evolution of Leishmania
    • Cupolillo, E., G. Grimaldi, Jr., H. Momen, and S. M. Beverley. 1995. Intergenic region typing (IRT): a rapid molecular approach to the characterization and evolution of Leishmania. Mol. Biochem. Parasitol. 73:145-155.
    • (1995) Mol. Biochem. Parasitol. , vol.73 , pp. 145-155
    • Cupolillo, E.1    Grimaldi Jr., G.2    Momen, H.3    Beverley, S.M.4
  • 8
    • 0034564097 scopus 로고    scopus 로고
    • Microsatellite mutations in the germline: Implications for evolutionary inference
    • Ellegren, H. 2000. Microsatellite mutations in the germline: implications for evolutionary inference. Trends Genet. 16:551-558.
    • (2000) Trends Genet. , vol.16 , pp. 551-558
    • Ellegren, H.1
  • 9
    • 0034770821 scopus 로고    scopus 로고
    • Leishmania donovani: Intraspecific polymorphisms of Sudanese isolates revealed by PCR-based analyses and DNA sequencing
    • El Tai, N. O., M. El Fari, I. Mauricio, M. A. Miles, L. Oskam, S. H. El Safi, W. Presber, and G. Schönian. 2001. Leishmania donovani: intraspecific polymorphisms of Sudanese isolates revealed by PCR-based analyses and DNA sequencing. Exp. Parasitol. 97:35-44.
    • (2001) Exp. Parasitol. , vol.97 , pp. 35-44
    • El Tai, N.O.1    El Fari, M.2    Mauricio, I.3    Miles, M.A.4    Oskam, L.5    El Safi, S.H.6    Presber, W.7    Schönian, G.8
  • 10
    • 0033793702 scopus 로고    scopus 로고
    • Genetic heterogeneity of ribosomal internal transcribed spacer (ITS) in clinical samples of Leishmania donovani spotted on filter papers as revealed by single-strand conformation polymorphisms (SSCP) and sequencing
    • El Tai, N. O., O. F. Osman, M. El Fari, W. Presber, and G. Schönian. 2000. Genetic heterogeneity of ribosomal internal transcribed spacer (ITS) in clinical samples of Leishmania donovani spotted on filter papers as revealed by single-strand conformation polymorphisms (SSCP) and sequencing. Trans. R. Soc. Trop. Med. Hyg. 94:575-579.
    • (2000) Trans. R. Soc. Trop. Med. Hyg. , vol.94 , pp. 575-579
    • El Tai, N.O.1    Osman, O.F.2    El Fari, M.3    Presber, W.4    Schönian, G.5
  • 11
    • 0003437299 scopus 로고
    • Distributed by the author. Department of Genetics, University of Washington, Seattle
    • Felsenstein, J. 1993. PHYLIP (phytogeny inference package) v 3.5c. Distributed by the author. Department of Genetics, University of Washington, Seattle.
    • (1993) PHYLIP (Phytogeny Inference Package) V 3.5c
    • Felsenstein, J.1
  • 12
    • 8644262307 scopus 로고    scopus 로고
    • Multiloeus microsatellite typing system for Penicillium marneffei reveals spatially structured populations
    • Fisher, M. C., D. Aanensen, S. de Hoog, and N. Vanittanakom. 2004. Multiloeus microsatellite typing system for Penicillium marneffei reveals spatially structured populations. J. Clin. Microbiol. 42:5065-5069.
    • (2004) J. Clin. Microbiol. , vol.42 , pp. 5065-5069
    • Fisher, M.C.1    Aanensen, D.2    De Hoog, S.3    Vanittanakom, N.4
  • 13
    • 0033860299 scopus 로고    scopus 로고
    • A test for concordance between the multilocus genealogies of genes and microsatellites in the pathogenic fungus Coccidioides immitis
    • Fisher, M. C., G. Koenig, T. J. White, and J. W. Taylor. 2000. A test for concordance between the multilocus genealogies of genes and microsatellites in the pathogenic fungus Coccidioides immitis. Mol. Biol. Evol. 17:1164-1174.
    • (2000) Mol. Biol. Evol. , vol.17 , pp. 1164-1174
    • Fisher, M.C.1    Koenig, G.2    White, T.J.3    Taylor, J.W.4
  • 14
    • 0028910661 scopus 로고
    • Conservation and dynamics of microsatellite loci over 300 million years of marine turtle evolution
    • FitzSimmons, N. N., C. Moritz, and S. S. Moore. 1995. Conservation and dynamics of microsatellite loci over 300 million years of marine turtle evolution. Mol. Biol. Evol. 12:432-440.
    • (1995) Mol. Biol. Evol. , vol.12 , pp. 432-440
    • Fitzsimmons, N.N.1    Moritz, C.2    Moore, S.S.3
  • 17
    • 0023091254 scopus 로고
    • Identification and distribution of New World Leishmania species characterized by serodeme analysis using monoclonal antibodies
    • Grimaldi, G., Jr., J. R. David, and D. McMahon-Pratt. 1987. Identification and distribution of New World Leishmania species characterized by serodeme analysis using monoclonal antibodies. Am. J. Trop. Med. Hyg. 36:270-287.
    • (1987) Am. J. Trop. Med. Hyg. , vol.36 , pp. 270-287
    • Grimaldi Jr., G.1    David, J.R.2    McMahon-Pratt, D.3
  • 18
    • 0037675363 scopus 로고    scopus 로고
    • Genomic polymorphism of Leishmania infantum: A relationship with clinical pleomorphism?
    • Guerbouj, S., I. Guizani, N. Speybroeck, D. Le Ray, and J. C. Dujardin. 2001. Genomic polymorphism of Leishmania infantum: a relationship with clinical pleomorphism? Infect. Genet. Evol. 1:49-59.
    • (2001) Infect. Genet. Evol. , vol.1 , pp. 49-59
    • Guerbouj, S.1    Guizani, I.2    Speybroeck, N.3    Le Ray, D.4    Dujardin, J.C.5
  • 19
    • 0034757653 scopus 로고    scopus 로고
    • Genetic heterogeneity and phylogenetic status of Leishmania (Leishmania) infantum zymodeme MON-1: Epidemiological implications
    • Hide, M., A. L. Bañuls, and M. Tibayrenc. 2001. Genetic heterogeneity and phylogenetic status of Leishmania (Leishmania) infantum zymodeme MON-1: epidemiological implications. Parasitology 123:425-432.
    • (2001) Parasitology , vol.123 , pp. 425-432
    • Hide, M.1    Bañuls, A.L.2    Tibayrenc, M.3
  • 20
    • 5644232129 scopus 로고    scopus 로고
    • Leishmania donovani is the only cause of visceral leishmaniasis in East Africa; previous descriptions of L. infantum and "L. archibaldi" from this region are a consequence of convergent evolution in the isoenzyme data
    • Jamjoom, M. B., R. W. Ashford, P. A. Bates, M. L. Chance, S. J. Kemp, P. C. Watts, and H. A. Noyes. 2004. Leishmania donovani is the only cause of visceral leishmaniasis in East Africa; previous descriptions of L. infantum and "L. archibaldi" from this region are a consequence of convergent evolution in the isoenzyme data. Parasitology 129:1-11.
    • (2004) Parasitology , vol.129 , pp. 1-11
    • Jamjoom, M.B.1    Ashford, R.W.2    Bates, P.A.3    Chance, M.L.4    Kemp, S.J.5    Watts, P.C.6    Noyes, H.A.7
  • 21
    • 0036282270 scopus 로고    scopus 로고
    • Polymorphic microsatellite repeats are not conserved between Leishmania donovani and Leishmania major
    • Jamjoom, M. B., R. W. Ashford, P. A. Bates, S. J. Kemp, and H. A. Noyes. 2002. Polymorphic microsatellite repeats are not conserved between Leishmania donovani and Leishmania major. Mol. Ecol. Notes 2:104-106.
    • (2002) Mol. Ecol. Notes , vol.2 , pp. 104-106
    • Jamjoom, M.B.1    Ashford, R.W.2    Bates, P.A.3    Kemp, S.J.4    Noyes, H.A.5
  • 22
    • 0036115648 scopus 로고    scopus 로고
    • Towards a standard battery of microsatellite markers for the analysis of the Leishmania donovani complex
    • Jamjoom, M. B., R. W. Ashford, P. A. Bates, S. J. Kemp, and H. A. Noyes. 2002. Towards a standard battery of microsatellite markers for the analysis of the Leishmania donovani complex. Ann. Trop. Med. Parasitol. 96:265-270.
    • (2002) Ann. Trop. Med. Parasitol. , vol.96 , pp. 265-270
    • Jamjoom, M.B.1    Ashford, R.W.2    Bates, P.A.3    Kemp, S.J.4    Noyes, H.A.5
  • 23
    • 2642643756 scopus 로고    scopus 로고
    • Subtraction with 3′ modified oligonucleotides eliminates amplification artefacts in DNA libraries enriched for microsatellites
    • Koblízková, A., J. Dolezel, and J. Macas. 1998. Subtraction with 3′ modified oligonucleotides eliminates amplification artefacts in DNA libraries enriched for microsatellites. BioTechniques 25:32-38.
    • (1998) BioTechniques , vol.25 , pp. 32-38
    • Koblízková, A.1    Dolezel, J.2    Macas, J.3
  • 24
    • 4544371090 scopus 로고    scopus 로고
    • The benefits of increasing the number of microsatellites utilized in genetic population studies: An empirical perspective
    • Koskinen, M. T., H. Hirvonen, P.-A. Landry, and C. R. Primmer. 2004. The benefits of increasing the number of microsatellites utilized in genetic population studies: an empirical perspective. Hereditas 141:61-67.
    • (2004) Hereditas , vol.141 , pp. 61-67
    • Koskinen, M.T.1    Hirvonen, H.2    Landry, P.-A.3    Primmer, C.R.4
  • 25
    • 26944475928 scopus 로고    scopus 로고
    • Analysis of ribosomal DNA internal transcribed spacer sequences of the Leishmania donovani complex
    • Kuhls, K., I. L. Mauricio, F. Pratlong, W. Presber, and G. Schönian. 2005. Analysis of ribosomal DNA internal transcribed spacer sequences of the Leishmania donovani complex. Microbes Infect. 7:1224-1234.
    • (2005) Microbes Infect. , vol.7 , pp. 1224-1234
    • Kuhls, K.1    Mauricio, I.L.2    Pratlong, F.3    Presber, W.4    Schönian, G.5
  • 26
    • 0002536191 scopus 로고
    • Evolution, classification and geographical distribution
    • W. Peters and R. Kilick-Kendrick (ed.). Academic Press, London, United Kingdom
    • Lainson, R., and J. J. Shaw. 1987. Evolution, classification and geographical distribution, p. 1-120. In W. Peters and R. Kilick-Kendrick (ed.), Leishmaniases in biology and medicine, vol. 1. Academic Press, London, United Kingdom.
    • (1987) Leishmaniases in Biology and Medicine , vol.1 , pp. 1-120
    • Lainson, R.1    Shaw, J.J.2
  • 27
    • 0036711245 scopus 로고    scopus 로고
    • Strain typing in Leishmania donovani by using sequence-confirmed amplified region analysis
    • Lewin, S., G. Schönian, N. El Tai, L. Oskam, P. Bastien, and W. Presber. 2002. Strain typing in Leishmania donovani by using sequence-confirmed amplified region analysis. Int. J. Parasitol. 32:1267-1276.
    • (2002) Int. J. Parasitol. , vol.32 , pp. 1267-1276
    • Lewin, S.1    Schönian, G.2    El Tai, N.3    Oskam, L.4    Bastien, P.5    Presber, W.6
  • 29
    • 0037492951 scopus 로고    scopus 로고
    • Identification and differentiation of Leishmania species in clinical samples by PCR amplification of the miniexon sequence and subsequent restriction fragment length polymorphism analysis
    • Marfurt, J., A. Nasereddin, I. Niederwieser, C. L. Jaffe, H.-P. Beck, and I. Felger. 2003. Identification and differentiation of Leishmania species in clinical samples by PCR amplification of the miniexon sequence and subsequent restriction fragment length polymorphism analysis. J. Clin. Microbiol. 41:3147-3153.
    • (2003) J. Clin. Microbiol. , vol.41 , pp. 3147-3153
    • Marfurt, J.1    Nasereddin, A.2    Niederwieser, I.3    Jaffe, C.L.4    Beck, H.-P.5    Felger, I.6
  • 30
    • 1842555129 scopus 로고    scopus 로고
    • Leishmania donovani complex: Genotyping with the ribosomal internal transcribed spacer and the mini-exon
    • Mauricio, I. L., J. R. Stothard, and M. A. Miles. 2004. Leishmania donovani complex: genotyping with the ribosomal internal transcribed spacer and the mini-exon. Parasitology 128:263-267.
    • (2004) Parasitology , vol.128 , pp. 263-267
    • Mauricio, I.L.1    Stothard, J.R.2    Miles, M.A.3
  • 32
    • 0035072579 scopus 로고    scopus 로고
    • Genetic typing and phytogeny of the Leishmania donovani complex by restriction analysis of PCR amplified gp63 intergenic regions
    • Mauricio, I. L., M. W. Gaunt, J. R. Stothard, and M. A. Miles. 2001. Genetic typing and phytogeny of the Leishmania donovani complex by restriction analysis of PCR amplified gp63 intergenic regions. Parasitology 122:393-403.
    • (2001) Parasitology , vol.122 , pp. 393-403
    • Mauricio, I.L.1    Gaunt, M.W.2    Stothard, J.R.3    Miles, M.A.4
  • 35
    • 0037093938 scopus 로고    scopus 로고
    • Relapses versus reinfections in patients coinfected with Leishmania infantum and human immunodeficiency virus type 1
    • Morales, M. A., I. Cruz, J. M. Rubio, C. Chicharro, C. Canavate, F. Laguna, and J. Alvar. 2002. Relapses versus reinfections in patients coinfected with Leishmania infantum and human immunodeficiency virus type 1. J. Infect. Dis. 185:1533-1537.
    • (2002) J. Infect. Dis. , vol.185 , pp. 1533-1537
    • Morales, M.A.1    Cruz, I.2    Rubio, J.M.3    Chicharro, C.4    Canavate, C.5    Laguna, F.6    Alvar, J.7
  • 36
    • 0030176178 scopus 로고    scopus 로고
    • Leishmania and Sauroleishmania: The use of random amplified polymorphic DNA for the identification of parasites from vertebrated and invertebrates
    • Motadezian, H., H. Noyes, and R. Maingoon. 1996. Leishmania and Sauroleishmania: the use of random amplified polymorphic DNA for the identification of parasites from vertebrated and invertebrates. Exp. Parasitol. 83:150-154.
    • (1996) Exp. Parasitol. , vol.83 , pp. 150-154
    • Motadezian, H.1    Noyes, H.2    Maingoon, R.3
  • 38
    • 0030886378 scopus 로고    scopus 로고
    • Phylogenetic assessment of length variation at a microsatellite locus
    • Ortí, G., D. E. Pearse, and J. C. Avise. 1997. Phylogenetic assessment of length variation at a microsatellite locus. Proc. Natl. Acad. Sci. USA 94:10745-10749.
    • (1997) Proc. Natl. Acad. Sci. USA , vol.94 , pp. 10745-10749
    • Ortí, G.1    Pearse, D.E.2    Avise, J.C.3
  • 40
    • 4644234600 scopus 로고    scopus 로고
    • Isoenzymatic analysis of 712 strains of Leishmania infantum in the south of France and relationship of enzymatic polymorphism to clinical and epidemiological features
    • Pratlong, F., J. A. Rioux, P. Marty, F. Faraut-Gambarelli, J. Dereure, G. Lanotte, and J. P. Dedet. 2004. Isoenzymatic analysis of 712 strains of Leishmania infantum in the south of France and relationship of enzymatic polymorphism to clinical and epidemiological features. J. Clin. Microbiol. 42:4077-4082.
    • (2004) J. Clin. Microbiol. , vol.42 , pp. 4077-4082
    • Pratlong, F.1    Rioux, J.A.2    Marty, P.3    Faraut-Gambarelli, F.4    Dereure, J.5    Lanotte, G.6    Dedet, J.P.7
  • 42
    • 0029007150 scopus 로고
    • Leishmania-human immunodeficiency virus coinfection in the Mediterranean basin: Isoenzymatic characterization of 100 isolates of the Leishmania infantum complex
    • Pratlong, F., J. P. Dedet, P. Marty, M. Portus, M. Deniau, J. Dereure, P. Abranches, J. Reynes, A. Martini, M. Lefebvre, and J. A. Rioux. 1995. Leishmania-human immunodeficiency virus coinfection in the Mediterranean basin: isoenzymatic characterization of 100 isolates of the Leishmania infantum complex. J. Infect. Dis. 172:323-326.
    • (1995) J. Infect. Dis. , vol.172 , pp. 323-326
    • Pratlong, F.1    Dedet, J.P.2    Marty, P.3    Portus, M.4    Deniau, M.5    Dereure, J.6    Abranches, P.7    Reynes, J.8    Martini, A.9    Lefebvre, M.10    Rioux, J.A.11
  • 43
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard, J. K., M. Stephens, and P. Donnelly. 2000. Inference of population structure using multilocus genotype data. Genetics 155:945-959.
    • (2000) Genetics , vol.155 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.3
  • 44
    • 1642263324 scopus 로고    scopus 로고
    • Antigen genes for molecular epidemiology of leishmaniasis: Polymorphism of cysteine proteinase B and surface metalloprotease glycoprotein 63 in the Leishmania donovani complex
    • Quispe Tintaya, K. W., X. Jing, J.-P. Dedet, S. Rijal, X. De Bolle, and J.-C. Dujardin. 2004. Antigen genes for molecular epidemiology of leishmaniasis: polymorphism of cysteine proteinase B and surface metalloprotease glycoprotein 63 in the Leishmania donovani complex. J. Infect. Dis. 189:1035-1043.
    • (2004) J. Infect. Dis. , vol.189 , pp. 1035-1043
    • Quispe Tintaya, K.W.1    Jing, X.2    Dedet, J.-P.3    Rijal, S.4    De Bolle, X.5    Dujardin, J.-C.6
  • 45
    • 0030612876 scopus 로고    scopus 로고
    • Hybridization capture of microsatellites directly from genomic DNA
    • Refseth, U. H., B. M. Fangan, and K. S. Jakobsen. 1997. Hybridization capture of microsatellites directly from genomic DNA. Electrophoresis 18:1519-1523.
    • (1997) Electrophoresis , vol.18 , pp. 1519-1523
    • Refseth, U.H.1    Fangan, B.M.2    Jakobsen, K.S.3
  • 48
    • 0033990048 scopus 로고    scopus 로고
    • Primer3 on the WWW for general users and biologist programmers
    • Rozen, S., and H. J. Skaletsky. 1998. Primer3 on the WWW for general users and biologist programmers. Mol. Biochem. Parasitol. 132:365-386.
    • (1998) Mol. Biochem. Parasitol. , vol.132 , pp. 365-386
    • Rozen, S.1    Skaletsky, H.J.2
  • 49
    • 0031922381 scopus 로고    scopus 로고
    • A comparison of several measures of genetic distance and population structure with microsatellite data: Bias and sampling variance
    • Ruzzante, D. E. 1998. A comparison of several measures of genetic distance and population structure with microsatellite data: bias and sampling variance. Can. J. Fish. Aquat. Sci. 55:1-14.
    • (1998) Can. J. Fish. Aquat. Sci. , vol.55 , pp. 1-14
    • Ruzzante, D.E.1
  • 51
    • 2542509923 scopus 로고    scopus 로고
    • Identification and determination of the relationship of species and strains within the genus Leishmania using single primers in the polymerase chain reaction
    • Schönian, G., C. Schweynoch, K. Zlaleva, L. Oskam, N. Kroon, Y. Gräser, and W. Presber. 1996. Identification and determination of the relationship of species and strains within the genus Leishmania using single primers in the polymerase chain reaction. Mol. Biochem. Parasitol. 77:19-29.
    • (1996) Mol. Biochem. Parasitol. , vol.77 , pp. 19-29
    • Schönian, G.1    Schweynoch, C.2    Zlaleva, K.3    Oskam, L.4    Kroon, N.5    Gräser, Y.6    Presber, W.7
  • 58
    • 0033858199 scopus 로고    scopus 로고
    • Microsatellites in different eukaryotic genomes: Survey and analysis
    • Tóth, G., Z. Gáspári, and J. Jurka. 2000. Microsatellites in different eukaryotic genomes: survey and analysis. Genome Res. 10:967-981.
    • (2000) Genome Res. , vol.10 , pp. 967-981
    • Tóth, G.1    Gáspári, Z.2    Jurka, J.3
  • 59
    • 0036165943 scopus 로고    scopus 로고
    • How to succeed in parasitic life without sex? Asking Leishmania
    • Victoir, K., and J. C. Dujardin. 2002. How to succeed in parasitic life without sex? Asking Leishmania. Trends Parasitol. 18:81-85.
    • (2002) Trends Parasitol , vol.18 , pp. 81-85
    • Victoir, K.1    Dujardin, J.C.2
  • 60
    • 3042530923 scopus 로고    scopus 로고
    • Genetic polymorphism within the Leishmania donovani complex: Correlation with geographic origin
    • Zemanová, M. Jirků, I. L. Mauricio, M. A. Miles, and J. Lukeš. 2004. Genetic polymorphism within the Leishmania donovani complex: correlation with geographic origin. Am. J. Trop. Hyg. 70:613-617.
    • (2004) Am. J. Trop. Hyg. , vol.70 , pp. 613-617
    • Zemanová1    Jirků, M.2    Mauricio, I.L.3    Miles, M.A.4    Lukeš, J.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.