Stabilization of calcium- and terbium-carboxylate bonds by NH⋯O hydrogen bonds in a mononuclear complex: A functional model of the active site of calcium-binding proteins

Inorganic Chemistry

Volumn 43, Issue 14, 2004, Pages 4447-4455

  Onoda, Akira ^a   Yamada, Yusuke ^a   Nakayama, Yoshiki ^a   Takahashi, Kazuyuki ^a   Adachi, Hiroshi ^a   Okamura, Taka Aki ^a   Nakamura, Akira ^b   Yamamoto, Hitoshi ^a   Ueyama, Norikazu ^a   Vyprachticky, Drahomir ^c,d   Okamoto, Yoshi ^c  

^a OSAKA UNIVERSITY   (Japan)

^b OM Research   (Japan)

^c POLYTECHNIC UNIVERSITY   (United States)

^d INSTITUTE OF MACROMOLECULAR CHEMISTRY   (Czech Republic)

Author keywords

[No Author keywords available]

Indexed keywords

BENZOIC ACID DERIVATIVE; CALCIUM BINDING PROTEIN; CALCIUM ION; CARBOXYLIC ACID DERIVATIVE; HYDROGEN; LIGAND; METAL COMPLEX; OXYGEN; TERBIUM;

ARTICLE; CALCIUM BINDING; COMPLEX FORMATION; CRYSTAL STRUCTURE; HYDROGEN BOND; LIGAND BINDING; MODEL; PROTON NUCLEAR MAGNETIC RESONANCE; SOLID STATE; STRUCTURE ANALYSIS; X RAY CRYSTALLOGRAPHY;

EID: 3142688267     PISSN: 00201669     EISSN: None     Source Type: Journal    
DOI: 10.1021/ic035075t     Document Type: Article

References (52)

1. Strynadka, N. C. J.; James, M. N. G. In Encyclopedia of Inorganic Chemistry; King, R. B., Ed.; John Wiley and Sons: Chichester, U.K., 1994; Vol. 1, pp 477-507.
2. Sia, S. K.; Li, M. X.; Spyracopoulos, L.; Gagne, S. M.; Liu, W.; Putkey, J. A.; Sykes, B. D. J. Biol. Chem. 1997, 272, 18216-18221.
3. Herzberg, O.; James, M. N. G. J. Mol. Biol. 1988, 203, 761-779.
4. Wang, X.; Li, M. X.; Spyracopoulos, L.; Beier, N.; Chandra, M.; Solora, R. J.; Sykes, B. D. J. Biol. Chem. 2001, 276, 25456-25466.
5. Babu, Y. S.; Bugg, C. E.; Cook, W. J. J. Mol. Biol. 1988, 204, 191-204.
6. Wilson, M. A.; Brunger, A. T. J. Mol. Biol. 2000, 301, 1234-1256.
7. Swain, A. L.; Kretsinger, R. H.; Amma, E. L. J. Biol. Chem. 1989, 220, 1017.
8. Declercq, J. P.; Tinant, B.; Parello, J.; Rambaud, J. J. Mol. Biol. 1991, 220, 1017-1039.
9. Declercq, J. P.; Evrard, C.; Lamzin, V.; Parello, J. Protein Sci. 1999, 8, 2194-2024.
10. Krestsinger, R. H.; Barry, C. D. Biochim. Biophys. Acta 1975, 405, 40-52.
11. Li, M. X.; Spyracopoulos, L.; Sykes, B. D. Biochemistry 1999, 38, 8289-8298.
12. Li, Y.; Love, M. L.; Putkey, J. A.; Cohen, C. Proc. Natl. Acad. Sci. U.S.A. 2000, 97, 5140-5145.
13. Elshorst, B.; Hennig, M.; Forsterling, H.; Diener, A.; Maurer, M.; Schulte, P.; Schwalbe, H.; Griesinger, C.; Krebs, J.; Schmid, H.; Vorherr, T.; Carafoli, E. Biochemistry 1999, 38, 12320-12332.
14. Mirzoeva, S.; Weigand, S.; Lukas, T. J.; Shuvalova, L.; Anderson, W. F.; Watterson, D. M. Biochemistry 1999, 38, 3936-3947.
15. Chou, J. J.; Li, S.; Kee, C. B.; Bax, A. Nat. Struct. Biol. 2001, 8, 990-997.
16. Baker, E. N.; Hubbard, R. E. Prog. Biophys. Mol. Biol. 1984, 44, 97-179.
17. Declerq, J. P.; Tinant, B.; Parello, J.; Etienne, G.; Huber, R. J. Mol. Biol. 1988, 202, 349-353.
18. Ueyama, N.; Yamada, Y.; Okamura, T.; Kimura, S.; Nakmura, A. Inorg. Chem. 1996, 35, 6473-6484.
19. Ueyama, N.; Nishikawa, N.; Yamada, Y.; Okamura, T.; Nakamura, A. J. Am. Chem. Soc. 1996, 118, 12826-12827.
20. Ueyama, N.; Inohara, M.; Onoda, A.; Ueno, T.; Okamura, T.; Nakamura, A. Inorg. Chem. 1999, 38, 4028-4031.
21. Ueno, T.; Kousumi, Y.; Yoshizawa-Kumagaye, K.; Nakajima, K.; Ueyama, N.; Okamura, T.; Nakamura, A. J. Am. Chem. Soc. 1998, 120, 12264-12273.
22. Ueno, T.; Nichikawa, N.; Moriyama, S.; Adachi, S.; Lee, K.; Okamura, T.; Ueyama, N.; Nakamura, A. Inorg. Chem. 1999, 38, 1199-1210.
23. Ueyama, N.; Hosoi, T.; Yamada, Y.; Doi, M.; Okamura, T.; Nakamura, A. Macromolecules 1998, 31, 7119-7126.
24. Ueyama, N.; Takeda, J.; Yamada, Y.; Onoda, A.; Okamura, T.; Nakamura, A. Inorg. Chem. 1999, 38, 475-478.
25. Ueyama, N.; Kozuki, K.; Doi, M.; Yamada, Y.; Takahashi, K.; Onoda., A.; Okamura, T.; Yamamoto, H. Macromolecules 2001, 34, 2607-2614.
26. Yamada, Y.; Ueyama, N.; Okamura, T.; Mori, W.; Nakamura, A. Inorg. Chim. Acta 1998, 275-276, 43-51.
27. Onoda, A.; Yamada, Y.; Takeda, J.; Nakayama, Y.; Okamura, T.; Doi, M.; Yamamoto, H.; Ueyama, N. Bull. Chem. Soc. Jpn. 2004, 77, 321-329.
28. Onoda, A.; Yamada, Y.; Doi, M.; Okamura, T.; Ueyama, N. Inorg. Chem. 2001, 40, 516-521.
29. Burum, D. P.; Rhim, W. K. J. Chem. Phys. 1979, 71, 944-956.
30. teXsan: Crystal Structure Analysis Package; Molecular Structure Corp., 1985, 1999.
31. Sheldrick, G. M. SHELXL-97, Program for the Refinement of Crystal Structure; Univeristy of Gottingen: Gottingen, Germany, 1997.
32. Sowadski, J.; Cronick, G.; Kretsinger, R. H. J. Mol. Biol. 1978, 124, 123-132.
33. Niebour, E. Structure. Bonding 1975, 22, 1.
34. Chattergee, A.; Maslen, E. N.; Watson, K. J. Acta Crystallogr. 1988, B44.
35. Horrocks, W. D., Jr.; Sudnick, D. R. Acc. Chem. Res. 1981, 14, 384-392.
36. Cui, Q.; Karplus, M. J. Am. Chem. Soc. 2002, 124, 3093-3124.
37. Pina, F.; Melo, M. J.; Alves, S.; Ballardini, R.; Maestri, M.; Passaniti, P. New J. Chem. 2001, 25, 747-752.
38. Martell, A. E.; Smith, R. M. Critical Stability Constants; Plenum Press: New York, 1974; Vol. 2.
39. Eberson, L. In The chemistry of carboxylic acids and esters; Patai, S., Ed.; John Wiley and Sons: London, 1969; pp 211-293.
40. Schauer, C. K.; Anderson, O. P. J. Am. Chem. Soc. 1987, 109, 3646-3456.
41. Schauer, C. K.; Anderson, O. P. J. Chem. Soc., Dalton Trans. 1989, 185-191.
42. Lee, D.; Lippard, S. J. J. Am. Chem. Soc. 2001, 123.
43. Lee, D.; Sorace, L.; Caneschi, A.; Lippard, S. J. Inorg. Chem. 2001, 40, 6774-6781.
44. Lee, D.; Hung, P.-L.; Spingler, B.; Lippard, S. J. Inorg. Chem. 2002, 41, 521-531.
45. Hagadorn, J. R.; Que, L., Jr.; Tolman, W. B. J. Am. Chem. Soc. 1998, 120, 1353113532.
46. Hagadorn, J. R.; Que, L., Jr.; Tolman, W. B. Inorg. Chem. 2000, 39, 6086-6090.
47. Anca, R.; Martinez-Carrera, S.; Garcia-Branco, S. Acta Crystallogr. 1967, 23, 1010.
48. Kolotuchin, S. V.; Thiessen, P. A.; Fenlon, E. E.; Wilson, S. R.; Loweth, C. J.; Zimmerman, S. C. Chemistry-Eur. J. 1999, 5, 2537-2347.
49. Carrell, C. J.; Carrell, H. L.; Erlebacher, J.; Glusker, J. P. J. Am. Chem. Soc. 1988, 110, 8651-8656.
50. Einspahr, H.; Bugg, C. E. Acta Crystallogr. 1981, B37, 1044-1052.
51. Einspahr, H.; Bugg, C. E. Metal Ions in Biological System; Dekker: Basel, Switzerland, 1984; Vol. 17.
52. Shoji, A.; Kumura, H.; Ozaki, T.; Sugsawa, H.; Deguchi, K. J. Am. Chem. Soc. 1996, 118, 7604-7607.