Heterogenous expression patterns and separate roles of the SEPALLATA gene LEAFY HULL STERILE1 in grasses

Plant Cell

Volumn 16, Issue 7, 2004, Pages 1692-1706

  Malcomber, Simon T ^a   Kellogg, Elizabeth A ^a  

^a UNIVERSITY OF MISSOURI ST LOUIS   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIODIVERSITY; GENES; MORPHOLOGY; PLANTS (BOTANY);

DIVERSIFICATION; GENE FUNCTIONS;

PLANT CELL CULTURE;

EMBRYOPHYTA; EUKARYOTA; ORYZA SATIVA; POACEAE; POOIDEAE; ZEA; ZEA MAYS;

ARTICLE; FLOWER; GENE; GENE EXPRESSION REGULATION; GENETICS; GENOME; METABOLISM; MOLECULAR EVOLUTION; MOLECULAR GENETICS; PHYLOGENY; POACEAE;

EVOLUTION, MOLECULAR; FLOWERS; GENE EXPRESSION REGULATION, PLANT; GENES, PLANT; GENOME, PLANT; MOLECULAR SEQUENCE DATA; PHYLOGENY; POACEAE;

EID: 3142687585     PISSN: 10404651     EISSN: None     Source Type: Journal    
DOI: 10.1105/tpc.021576     Document Type: Article

References (59)

1. Ambrose, B.A., Lerner, D.R., Ciceri, P., Padilla, C.M., Yanofsky, M.F., and Schmidt, R.J. (2000). Molecular and genetic analyses of the silky1 gene reveal conservation in floral organ specification between eudicots and monocots. Mol. Cell 5, 569-579.
2. Ananiev, E.V., Vales, M.I., Phillips, R.L., and Rines, H.W. (2002). Isolation of A/D and C genome specific dispersed and clustered repetitive DNA sequences from Avena sativa. Genome 45, 431-441.
3. Angenent, G.C., Franken, J., Busscher, M., Weiss, D., and van Tunen, A.J. (1994). Co-suppression of the petunia homeotic gene FBP2 affects the identity of the generative meristem. Plant J. 5, 33-44.
4. Becker, A., and Theissen, G. (2003). The major clades of MADS-box genes and their role in the development and evolution of flowering plants. Mol. Phylogenet. Evol. 29, 464-489.
5. Bonhomme, F., Sommer, H., Bernier, G., and Jacqmard, A. (1997). Characterization of SaMADS D from Sinapis alba suggests a dual function of the gene: In inflorescence development and floral organogenesis. Plant Mol. Biol. 34, 573-582.
6. Cacharrón, J., Saedler, H., and Theissen, G. (1999). Expression of MADS box genes ZMM8 and ZMM14 during inflorescence development of Zea mays discriminates between the upper and the lower floret of each spikelet. Dev. Genes Evol. 209, 411-420.
7. Chung, Y. Y., Kim, S.R., Finkel, D., Yanofsky, M.F., and An, G. (1994). Early flowering and reduced apical dominance result from ectopic expression of a rice MADS box gene. Plant Mol. Biol. 26, 657-665.
8. Clark, L.G., Zhang, W.P., and Wendel, J.F. (1995). A phylogeny of the grass family (Poaceae) based on ndhF sequence data. Syst. Bot. 20, 436-460.
9. Clifford, H.T. (1987). Spikelet and floral morphology. In Grass Systematics and Evolution, T.R. Soderstrom, K.W. Hilu, C.S. Campbell, and M.E. Barkworth, eds (Washington, DC: Smithsonian Institute), pp. 21-30.
10. Coen, E.S., and Meyerowitz, E.M. (1991). The war of the whorls: Genetic interactions controlling flower development. Nature 353, 31-37.
11. Ewing, B., Hillier, L., Wendl, M.C., and Green, P. (1998). Base-calling of automated sequencer traces using phred. I. Accuracy assessment. Genome Res. 8, 175-185.
12. Favaro, R., Pinyopich, A., Battaglia, R., Kooiker, M., Borghi, L., Ditta, G., Yanofsky, M.F., Kater, M.M., and Colombo, L. (2003). MADS box protein complexes control carpel and ovule development in Arabidopsis. Plant Cell 15, 2603-2611.
13. Ferrario, S., Immink, R.G.H., Shchennikova, A., Busscher-Lange, J., and Angenent, G.C. (2003). The MADS box gene FBP2 is required for SEPALLATA function in petunia. Plant Cell 15, 914-925.
14. Gaut, B.S., and Doebley, J.F. (1997). DNA sequence evidence for segmental allotetraploid origin of maize. Proc. Natl. Acad. Sci. USA 94, 6809-6814.
15. Gould, F.W, (1975). The Grasses of Texas. (College Station, TX: Texas A&M University Press).
16. Grass Phylogeny Working Group. (2001). Phylogeny and subfamilial classification of the grasses (Poaceae). Ann. Mo. Bot. Gard. 88, 373-457.
17. Greco, R., Stagi, L., Colombo, L., Angenent, G.C., Sari-Gorla, M., and Pe, M.E. (1997). MADS box genes expressed in developing inflorescences of rice and sorghum. Mol. Gen. Genet. 253, 615-623.
18. Honma, T., and Goto, K. (2001). Complexes of MADS-box proteins are sufficient to convert leaves into floral organs. Nature 409, 525-529.
19. Huelsenbeck, J.P., and Ronquist, F. (2001). MrBayes: Bayesian inference of phylogenetic trees. Bioinformatics 17, 754-755.
20. Jackson, D. (1991). In situ hybridization in plants. In Molecular Plant Pathology: A Practical Approach, D.J. Bowles, S.J. Gurr, and M. McPherson, eds (Oxford: Oxford University Press), pp. 163-174.
21. Jackson, D., Veit, B., and Hake, S. (1994). Expression of maize KNOTTED1 related homeobox genes in the shoot apical meristem predicts patterns of morphogenesis in the vegetative shoot. Development 120, 405-413.
22. Jeanmougin, F., Thompson, J.D., Gouy, M., Higgins, D.G., and Gibson, T.J. (1998). Multiple sequence alignment with Clustal X. Trends Biochem. Sci. 23, 403-405.
23. Jeon, J.S., Jang, S., Lee, S., Nam, J., Kim, C., Lee, S.H., Chung, Y.Y., Kim, S.R., Lee, Y.H., Cho, Y.G., and An, G. (2000a). leafy hull sterile1 is a homeotic mutation in a rice MADS box gene affecting rice flower development. Plant Cell 12, 871-884.
24. Jeon, J.S., Lee, S., Jung, K.H., Yang, W.S., Yi, G.H., Oh, B.C., and An, G.H. (2000b). Production of transgenic rice plants showing reduced heading date and plant height by ectopic expression of rice MADS-box genes. Mol. Breeding 6, 581-592.
25. Kang, H.G., and An, G.H. (1997). Isolation and characterization of a rice MADS box gene belonging to the AGL2 gene family. Mol. Cells 7, 45-51.
26. Kellogg, E.A., and Linder, H.P. (1995). Phylogeny of the Poales. In Monocotyledons: Systematics and Evolution, P.J. Rudall, P.J. Cribb, D.F. Cutler, and C.J. Humphries, eds (London: Royal Botanic Gardens, Kew), pp. 511-542.
27. Kim, M., McCormick, S., Timmermans, M., and Sinha, N. (2003). The expression domain of PHANTASTICA determines leaflet placement in compound leaves. Nature 424, 438-443.
28. Komatsu, M., Chujo, A., Nagato, Y., Shimamoto, K., and Kyozuka, J. (2003). FRIZZY PANICLE is required to prevent the formation of axillary meristems and to establish floral meristem identity in rice spikelets. Development 130, 3841-3850.
29. Kotilainen, M., Elomaa, P., Uimari, A., Albert, V.A., Yu, D.Y., and Teeri, T.H. (2000). GRCD1, an AGL2-like MADS box gene, participates in the C function during stamen development in Gerbera hybrida. Plant Cell 12, 1893-1902.
30. Koul, K.K., and Gohil, R.N. (1987). SOCGI plant chromosome number reports - IV [i.e., V]. J. Cytol. Genet. 22, 161-162.
31. Kramer, E.M., and Irish, V.F. (1999). Evolution of genetic mechanisms controlling petal development. Nature 399, 144-148.
32. Kyozuka, J., Kobayashi, T., Morita, M., and Shimamoto, K. (2000). Spatially and temporally regulated expression of rice MADS box genes with similarity to Arabidopsis class A, B and C genes. Plant Cell Physiol. 41, 710-718.
33. Laudencia-Chingcuanco, D., and Hake, S. (2002). The indeterminate floral apex1 gene regulates meristem determinacy and identity in the maize inflorescence. Development 129, 2629-2638.
34. Laurie, D.A., Pratchett, N., Devos, K.M., Leitch, I.J., and Gale, M.D. (1993). The distribution of RFLP markers on chromosome 2 (2H) of barley in relation to the physical and genetic location of 5S rDNA. Theor. Appl. Genet. 87, 177-183.
35. Maddison, D.R., and Maddison, W.P. (2003). MacClade: Analysis of Phylogeny and Character Evolution. (Sunderland, MA: Sinauer Associates).
36. Münster, T., Deleu, W., Wingen, L.U., Ouzunova, M., Cacharrón, J., Faigl, W., Werth, S., Kim, J.T.T., Saedler, H., and Theissen, G. (2002). Maize MADS-box genes galore. Maydica 47, 287-301.
37. Nam, J., Kim, J., Lee, S., An, G., Ma, H., and Nei, M. (2004). Type I MADS-box genes have experienced faster birth-and-death evolution than type II MADS-box genes in angiosperms. Proc. Natl. Acad. Sci. USA 101, 1910-1915.
38. Pelaz, S., Ditta, G.S., Baumann, E., Wisman, E., and Yanofsky, M.F. (2000). B and C floral organ identity functions require SEPALLATA MADS-box genes. Nature 405, 200-203.
39. Pelaz, S., Gustafson-Brown, C., Kohalmi, S.E., Crosby, W.L., and Yanofsky, M.F. (2001a). APETALA1 and SEPALLATA3 interact to promote flower development. Plant J. 26, 385-394.
40. Pelaz, S., Tapia-Lopez, R., Alvarez-Buylla, E.R., and Yanofsky, M.F. (2001b). Conversion of leaves into petals in Arabidopsis. Curr. Biol. 11, 182-184.
41. Pelucchi, N., Fornara, F., Favalli, C., Masiero, S., Lago, C., Pe, M.E., Colombo, L., and Kater, M.M. (2002). Comparative analysis of rice MADS-box genes expressed during flower development. Sex. Plant Reprod. 15, 113-122.
42. Pnueli, L., Hareven, D., Broday, L., Hurwitz, C., and Lifschitz, E. (1994). The TM5 MADS box gene mediates organ differentiation in the three inner whorls of tomato flowers. Plant Cell 6, 175-186.
43. Posada, D., and Crandall, K.A. (1998). MODELTEST: Testing the model of DNA substitutions. Bioinformatics 14, 817-818.
44. Prasad, K., Sriram, P., Kumar, C.S., Kushalappa, K., and Vijayraghavan, U. (2001). Ectopic expression of rice OsMADS1 reveals a role in specifying the lemma and palea, grass floral organs analogous to sepals. Dev. Genes Evol. 211, 281-290.
45. Rounsley, S.D., Ditta, G.S., and Yanofsky, M.F. (1995). Diverse roles for MADS box genes in Arabidopsis development. Plant Cell 7, 1259-1269.
46. Sambrook, J.C., Fritsch, E.F., and Maniatis, T. (1989). Molecular Cloning: A Laboratory Manual. (Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press).
47. Schmitz, J., Franzen, R., Ngyuen, T.H., Garcia-Maroto, F., Pozzi, C., Salamini, F., and Rohde, W. (2000). Cloning, mapping and expression analysis of barley MADS-box genes. Plant Mol. Biol. 42, 899-913.
48. Schmidt, R.J., and Ambrose, B.A. (1998). The blooming of grass flower development. Curr. Opin. Plant Biol. 1, 60-67.
49. Stapf, O. (1917). Gramineae. In Flora of Tropical Africa, D. Oliver, ed (London: Lowell Reeve & Co.), pp. 1-192.
50. Strand, A.E., Leebens-Mack, J., and Milligan, B.C. (1997). Nuclear DNA-based markers for plant evolutionary biology. Mol. Ecol. 6, 113-118.
51. Swofford, D.L. (2000). PAUP*: Phylogenetic Analysis Using Parsimony. (Sunderland, MA: Sinauer Associates).
52. Theissen, G. (2001). Development of floral organ identity: Stories from the MADS house. Curr. Opin. Plant Biol. 4, 75-85.
53. Theissen, G., Becker, A., Di Rosa, A., Kanno, A., Kim, J.T., Münster, T., Winter, K.U., and Saedler, H. (2000). A short history of MADS-box genes in plants. Plant Mol. Biol. 42, 115-149.
54. Theissen, G., and Saedler, H. (1995). MADS-box genes in plant ontogeny and phylogeny: Haeckel's 'biogenetic law' revisited. Curr. Opin. Genet. Dev. 5, 628-639.
55. Theissen, G., and Saedler, H. (2001). Plant biology. Floral quartets. Nature 409, 469-471.
56. Tzeng, T.Y., Hsiao, C.C., Chi, P.J., and Yang, C.H. (2003). Two lily SEPALLATA-like genes cause different effects on floral formation and floral transition in Arabidopsis. Plant Physiol. 133, 1091-1101.
57. Tzeng, T.Y., and Yang, C.H. (2001). A MADS box gene from lily (Lilium longiflorum) is sufficient to generate dominant negative mutation by interacting with PISTILLATA (PI) in Arabidopsis thaliana. Plant Cell Physiol. 42, 1156-1168.
58. Vandenbussche, M., Zethof, J., Souer, E., Koes, R., Tornielli, G.B., Pezzotti, M., Ferrario, S., Angenent, G.C., and Gerats, T. (2003). Toward the analysis of the petunia MADS box gene family by reverse and forward transposon insertion mutagenesis approaches: B, C, and D floral organ identity functions require SEPALLATA-like MADS box genes in petunia. Plant Cell 15, 2680-2693.
59. Yu, H., and Goh, C.J. (2000). Identification and characterization of three orchid MADS-box genes of the AP1/AGL9 subfamily during floral transition. Plant Physiol. 123, 1325-1336.