Impacts of QTL x environment interactions on genetic response to marker-assisted selection

Acta Genetica Sinica

Volumn 33, Issue 1, 2006, Pages 63-71

  Liu, Peng Yuan ^a   Zhu, Jun ^a   Yan, Lu ^a  

^a ZHEJIANG UNIVERSITY   (China)

Author keywords

General response; Marker assisted selection; QTL x environment interaction; Total response

Indexed keywords

ARTICLE; ENVIRONMENTAL FACTOR; GENETIC TRAIT; GENOTYPE; HERITABILITY; MARKER ASSISTED BREEDING; MARKER GENE; NONHUMAN; PLANT BREEDING; QUANTITATIVE TRAIT LOCUS;

EID: 31344451887     PISSN: 03794172     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0379-4172(06)60010-3     Document Type: Article

References (37)

1. Falconer D S. Introduction to quantitative genetics. 2nd Edition. New York: Longman Press, 1981.
2. Lin C S, Binns M R, Lefkovitch L P. Stability analysis:where do we stand? Crop Sci, 1986, 26: 894-900.
3. Westcott B. Some methods of analysis genotype-environment interaction. Heredity, 1986, 56: 243-53.
4. Wang D L, Zhu J, Li Z K, Paterson A H. Mapping QTLs with epistatic effects and QTL x environment interactions by mixed linear model approaches. Theor Appl Genet, 1999, 99: 1255-1264.
5. Paterson A H, Damon S, Hewitt J D, Zamir D, Rabinowitch H D, Lincoln S E, Lander E S, Tanksley S D. Mendelian factors underlying quantitative traits in tomato:comparison across species, generations, and environments. Genetics, 1991, 127: 181-197.
6. Bubeck D M, Goodman M M, Beavis W D, Grant D. Quantitative trait loci controlling resistance to gray leaf spot in maize. Crop Sci, 1993, 33: 838-847.
7. Freyer R, Douches D S. Development of a model for marker-assisted selection of specific gravity in diploid potato across environments. Crop Sci, 1994, 34: 1361-1368.
8. Lee S H, Bailey M A, Mian M A, Carter T E, Ashley D A, Hussy R S, Parrott W A, Boerma H R. Molecular markers associated with soybean plant height, lodging, and maturity across locations. Crop Sci, 1996, 36: 728-735.
9. Lu C, Shen L, Tan Z, Xu Y, He P, Chen Y, Zhu L. Comparative mapping of QTLs for agronomic traits of rice across environments using a doubled-haploid population. Theor Appl Genet, 1996, 93: 1211-1217.
10. Romagosa I S, Ullrich E, Han F, Hayes P M. Use of the genetic main effects and multiplicative interaction model in QTL mapping for adaptation in barley. Theor Appl Genet, 1996, 93: 30-37.
11. Veldboom L R, Lee M. Genetic mapping of quantitative trait loci in maize in stress and non-stress environments: I. grain yield and yield components. Crop Sci, 1996, 36: 1310-1319.
12. Veldboom L R, Lee M. Genetic mapping of quantitative trait loci in maize in stress and non-stress environments: II. Plant height and flowering. Crop Sci, 1996, 36: 1320-1327.
13. Zhuang J Y, Lin H X, Lu J, Qian H R, Hittalmani S, Huang N, Zheng K L. Analysis of QTL x environment interaction for yield components and plant height in rice. Theor Appl Genet, 1997, 95: 799-808.
14. Yan J Q, Zhu J, He C X, Benmoussa M, Wu P. Molecular marker-assisted dissection of genotype x environment interaction for plant type traits in rice (Oryza sativa L.). Crop Sci, 1999, 39: 538-544.
15. Cao G Q, Zhu J, He C X, Gao Y M, Yan J Q, Wu P. Impacts of epistasis and QTL X environment interaction for developmental behavior of plant height in rice (Oryza sativa L.). Theor Appl Genet, 2001, 103: 153-160.
16. Lande R, Thompson R. Efficiency of marker-assisted selection in the improvement of quantitative traits. Genetics, 1990, 124: 743-756.
17. Zhang W, Smith C. Computer simulation of marker-assisted selection utilizing linkage disequilibrium. Theor Appl Genet, 1992, 83: 813-820.
18. Zhang W, Smith C. Simulation of marker-assisted selection utilizing linkage disequilibrium:the effects of several additional factors. Theor Appl Genet, 1993, 86: 492-496.
19. Gimelfarb A, Lande R. Simulation of marker-assisted selection in hybrid populations. Genet Res, 1994, 63: 39-47.
20. Ruane J, Colleau J J. Marker-assisted selection for genetic improvement of animal populations when a single QTL is marked. Genet Res, 1995, 66: 71-83.
21. Whittaker J C, Curnow R N, Haley C S, Thompson R. Using marker-maps in marker-assisted selection. Genet Res, 1995, 66: 255-265.
22. Hospital F, Moreau L, Lacoudre F, Charcosset A, Gallais A. More on the efficiency of marker-assisted selection, Theor Appl Genet, 1997, 95: 1181-1189.
23. Luo Z W, Thompson R, Woolliams J A. A population genetics model of marker-assisted selection. Genetics, 1997, 146: 1173-1183.
24. Knapp S J. Marker-assisted selection as a strategy for increasing the probability of selecting superior genotypes. Crop Sci, 1998, 38: 1164-1174.
25. Moreau L, Charcrosset A, Hospital F, Gallais A. Marker-assisted selection efficiency in populations of finite size. Genetics, 1998, 148: 1353-1365.
26. Ollivier L. The accuracy of marker-assisted selection for quantitative traits within populations in linkage equilibrium. Genetics, 1998, 148: 1367-1372.
27. Spelman R, Bovenhuis H. Genetic response from marker assisted selection in an outbred population for differing marker bracket sizes and with two identified quantitative trait loci. Genetics, 1998, 148: 1389-1396.
28. Xie C, Xu S. Efficiency of multistage marker-assisted selection in the improvement of multiple quantitative traits. Heredity, 1998, 80: 489-498.
29. Liu P Y, Zhu J, Lou X Y, Lu Y. A method for marker-assisted selection based on QTLs with epistatic effects. Genetica, 2003, 119: 75-86.
30. Liu P Y, Zhu J, Lu Y. Marker-assisted selection in segregating generations of self-fertilizing crops. Theor Appl Genet, 2004, 109: 370-376.
31. Rosielle A A, Hamblin J. Theoretical aspects of selection for yield in stress and non-stress environments. Crop Sci, 1981, 21: 943-946.
32. Zhu J, Weir B S. Mixed-model approaches for genetic analysis of quantitative traits. In: Chen L S, Ruan S G, Zhu J, eds. Advanced topics in biomathematics. World Scientific Publishing Co, Singapore, 1998, 321-330.
33. Zhu J. Mixed model approaches of mapping genes for complex quantitative traits. J Zhejiang Univ (Natural Sci), 1999, 33: 327-335.
34. Haldane J B S. The combination of linkage values and the calculation of distance between the loci of linked factors. J Genet, 1919, 8: 299-309.
35. Zhu J. Analysis methods for genetic models. Beijing: Agricultural Publishing House of China, 1997.
36. Mather K, Jinks J L. Biometrical genetics. Chapman and Hall, London, 1982.
37. Finlay K W, Wilkinson G N. The analysis of adaptation in a plant breeding program. Australian J Agric Res, 1961, 14: 743-754.