-
2
-
-
0030729080
-
Analysis of 16S rDNA and methane monooxygenase gene sequences reveals a novel group of thermotolerant and thermophilic methanotrophs, Methylocaldum gen. nov
-
L. Bodrossy, E.M. Holmes, A.J. Holmes, K.L. Kovacs, and J.C. Murrell Analysis of 16S rDNA and methane monooxygenase gene sequences reveals a novel group of thermotolerant and thermophilic methanotrophs, Methylocaldum gen. nov Arch. Microbiol. 168 1997 493 503
-
(1997)
Arch. Microbiol.
, vol.168
, pp. 493-503
-
-
Bodrossy, L.1
Holmes, E.M.2
Holmes, A.J.3
Kovacs, K.L.4
Murrell, J.C.5
-
4
-
-
1842417171
-
Methylosphaera hansonii gen. nov., sp. nov., a psychrophilic, group I methanotroph from antarctic marine-salinity, meromictic lakes
-
J.P. Bowman, S.A. McCammon, and J.H. Skerratt Methylosphaera hansonii gen. nov., sp. nov., a psychrophilic, group I methanotroph from antarctic marine-salinity, meromictic lakes Microbiology UK 143 1997 1451 1459
-
(1997)
Microbiology UK
, vol.143
, pp. 1451-1459
-
-
Bowman, J.P.1
McCammon, S.A.2
Skerratt, J.H.3
-
5
-
-
0003238763
-
The methanotrophs: The families Methylococcacea and Methylocystaceae
-
M. Dworkin Springer New York
-
J.P. Bowman The methanotrophs: the families Methylococcacea and Methylocystaceae M. Dworkin The Prokaryotes 2000 Springer New York
-
(2000)
The Prokaryotes
-
-
Bowman, J.P.1
-
6
-
-
0842287584
-
Preferential cultivation of type II methanotrophic bacteria from littoral sediments (Lake Constance)
-
I. Bussmann, M. Pester, A. Brune, and B. Schink Preferential cultivation of type II methanotrophic bacteria from littoral sediments (Lake Constance) FEMS Microbiol. Ecol. 47 2004 179 189
-
(2004)
FEMS Microbiol. Ecol.
, vol.47
, pp. 179-189
-
-
Bussmann, I.1
Pester, M.2
Brune, A.3
Schink, B.4
-
7
-
-
0032746991
-
Molecular characterization of functional and phylogenetic genes from natural populations of methanotrophs in lake sediments
-
A.M. Costello, and M.E. Lidstrom Molecular characterization of functional and phylogenetic genes from natural populations of methanotrophs in lake sediments Appl. Environ. Microbiol. 65 1999 5066 5074
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 5066-5074
-
-
Costello, A.M.1
Lidstrom, M.E.2
-
8
-
-
31144463330
-
Preparation of radioactive probes
-
Akkermans, A.D.L., van Elsas, J.D., de Bruijn, F.J. (Eds.), Kluwer Academic Publishers, Dortrecht, The Netherlands
-
Cunningham, M., 1995. Preparation of radioactive probes. In: Akkermans, A.D.L., van Elsas, J.D., de Bruijn, F.J. (Eds.), Molecular Microbial Ecology Manual, 2.2.1. Kluwer Academic Publishers, Dortrecht, The Netherlands, pp. 1-34.
-
(1995)
Molecular Microbial Ecology Manual, 2.2.1
, pp. 1-34
-
-
Cunningham, M.1
-
9
-
-
0028164248
-
The use of colony development for the characterization of bacterial communities in soil and on roots
-
F.A.A.M. De Leij, J.M. Whipps, and J.M. Lynch The use of colony development for the characterization of bacterial communities in soil and on roots Microbiol. Ecol. 27 1994 81 97
-
(1994)
Microbiol. Ecol.
, vol.27
, pp. 81-97
-
-
De Leij, F.A.A.M.1
Whipps, J.M.2
Lynch, J.M.3
-
10
-
-
0036151243
-
Methylocapsa acidiphila gen. nov., sp. nov., a novel methane-oxidizing and dinitrogen-fixing acidophilic bacterium from Sphagnum bog
-
S.N. Dedysh, V.N. Khmelenina, N.E. Suzina, Y.A. Trotsenko, J.D. Semrau, W. Liesack, and J.M. Tiedje Methylocapsa acidiphila gen. nov., sp. nov., a novel methane-oxidizing and dinitrogen-fixing acidophilic bacterium from Sphagnum bog Int. J. Syst. Evol. Microbiol. 52 2002 251 261
-
(2002)
Int. J. Syst. Evol. Microbiol.
, vol.52
, pp. 251-261
-
-
Dedysh, S.N.1
Khmelenina, V.N.2
Suzina, N.E.3
Trotsenko, Y.A.4
Semrau, J.D.5
Liesack, W.6
Tiedje, J.M.7
-
11
-
-
0034075034
-
Methylocella palustris gen. nov., sp. nov., a new methane-oxidizing acidophilic bacterium from peat bogs, representing a novel subtype of serine-pathway methanotrophs
-
S.N. Dedysh, W. Liesack, V.N. Khmelenina, N.E. Suzina, Y.A. Trotsenko, and J.D. Semrau Methylocella palustris gen. nov., sp. nov., a new methane-oxidizing acidophilic bacterium from peat bogs, representing a novel subtype of serine-pathway methanotrophs Int. J. Syst. Evol. Microbiol. 50 Pt 3 2000 955 969
-
(2000)
Int. J. Syst. Evol. Microbiol.
, vol.50
, Issue.3 PART
, pp. 955-969
-
-
Dedysh, S.N.1
Liesack, W.2
Khmelenina, V.N.3
Suzina, N.E.4
Trotsenko, Y.A.5
Semrau, J.D.6
-
12
-
-
0033941482
-
Assessment of microbial diversity in four southwestern United States soils by 16S rRNA gene terminal restriction fragment analysis
-
J. Dunbar, L.O. Ticknor, and C.R. Kuske Assessment of microbial diversity in four southwestern United States soils by 16S rRNA gene terminal restriction fragment analysis Appl. Environ. Microbiol. 66 2000 2943 2950
-
(2000)
Appl. Environ. Microbiol.
, vol.66
, pp. 2943-2950
-
-
Dunbar, J.1
Ticknor, L.O.2
Kuske, C.R.3
-
13
-
-
0024444791
-
Isolation and direct complete nucleotide determination of entire genes. Characterization of a gene coding for 16S ribosomal RNA
-
U. Edwards, T. Rogall, H. Blocker, M. Emde, and E.C. Bottger Isolation and direct complete nucleotide determination of entire genes. Characterization of a gene coding for 16S ribosomal RNA Nucleic Acids Res. 17 1989 7843 7853
-
(1989)
Nucleic Acids Res.
, vol.17
, pp. 7843-7853
-
-
Edwards, U.1
Rogall, T.2
Blocker, H.3
Emde, M.4
Bottger, E.C.5
-
14
-
-
0038221194
-
Formation of pseudo-terminal restriction fragments, a PCR-related bias affecting terminal restriction fragment length polymorphism analysis of microbial community structure
-
M. Egert, and M.W. Friedrich Formation of pseudo-terminal restriction fragments, a PCR-related bias affecting terminal restriction fragment length polymorphism analysis of microbial community structure Appl. Environ. Microbiol. 69 2003 2555 2562
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, pp. 2555-2562
-
-
Egert, M.1
Friedrich, M.W.2
-
15
-
-
0029805854
-
Direct ribosome isolation from soil to extract bacterial rRNA for community analysis
-
A. Felske, B. Engelen, U. Nubel, and H. Backhaus Direct ribosome isolation from soil to extract bacterial rRNA for community analysis Appl. Environ. Microbiol. 62 1996 4162 4167
-
(1996)
Appl. Environ. Microbiol.
, vol.62
, pp. 4162-4167
-
-
Felske, A.1
Engelen, B.2
Nubel, U.3
Backhaus, H.4
-
16
-
-
0035490873
-
Genus- and family-level 16S rRNA-targeted oligonucleotide probes for ecological studies on methanotrophic bacteria
-
J. Gulledge, A. Ahmad, P.A. Steudler, W.J. Pomerantz, and C.M. Cavanaugh Genus- and family-level 16S rRNA-targeted oligonucleotide probes for ecological studies on methanotrophic bacteria Appl. Environ. Microbiol. 67 2001 4726 4733
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 4726-4733
-
-
Gulledge, J.1
Ahmad, A.2
Steudler, P.A.3
Pomerantz, W.J.4
Cavanaugh, C.M.5
-
18
-
-
0035458355
-
Detection of methanotroph diversity on roots of submerged rice plants by molecular retrieval of pmoA, mmoX, mxaF, and 16S rRNA and ribosomal DNA, including pmoA-based terminal restriction fragment length polymorphism profiling
-
H.P. Horz, M.T. Yimga, and W. Liesack Detection of methanotroph diversity on roots of submerged rice plants by molecular retrieval of pmoA, mmoX, mxaF, and 16S rRNA and ribosomal DNA, including pmoA-based terminal restriction fragment length polymorphism profiling Appl. Environ. Microbiol. 67 2001 4177 4185
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 4177-4185
-
-
Horz, H.P.1
Yimga, M.T.2
Liesack, W.3
-
19
-
-
0038610460
-
-
Web document
-
Houghton, J.T., Ding, Y., Griggs, D.J., Noguer, M., van der Linden, P.J., Dai, X. et al., 2001. Climate Change 2001: The Scientific Basis. Web document, http://www.grida.no/climate/ipcc_tar/wg1/index.htm.
-
(2001)
Climate Change 2001: The Scientific Basis
-
-
Houghton, J.T.1
Ding, Y.2
Griggs, D.J.3
Noguer, M.4
Van Der Linden, P.J.5
Dai, X.6
-
20
-
-
0033589470
-
Inverse modeling of methane sources and sinks using the adjoint of a global transport model
-
S.T. Howeling, F. Kaminski, J. Dentener, J. Lelieveld, and M. Heimann Inverse modeling of methane sources and sinks using the adjoint of a global transport model J. Geophys. Res. 104 1999 26137 26160
-
(1999)
J. Geophys. Res.
, vol.104
, pp. 26137-26160
-
-
Howeling, S.T.1
Kaminski, F.2
Dentener, J.3
Lelieveld, J.4
Heimann, M.5
-
21
-
-
0027338553
-
Methane emission and methane oxidation in land-fill cover soil
-
H.A. Jones, and D.B. Nedwell Methane emission and methane oxidation in land-fill cover soil FEMS Microbiol. Ecol. 102 1993 185 195
-
(1993)
FEMS Microbiol. Ecol.
, vol.102
, pp. 185-195
-
-
Jones, H.A.1
Nedwell, D.B.2
-
22
-
-
0028973568
-
Capacity for methane oxidation in landfill cover soils measured in laboratory-scale soil microcosms
-
D. Kightley, D.B. Nedwell, and M. Cooper Capacity for methane oxidation in landfill cover soils measured in laboratory-scale soil microcosms Appl. Environ. Microbiol. 61 1995 592 601
-
(1995)
Appl. Environ. Microbiol.
, vol.61
, pp. 592-601
-
-
Kightley, D.1
Nedwell, D.B.2
Cooper, M.3
-
23
-
-
0031749688
-
Changing concentration, lifetime and climate forcing of atmospheric methane
-
J. Lelieveld, P.J. Crutzen, and J.F. Dentener Changing concentration, lifetime and climate forcing of atmospheric methane Tellus 50B 1998 128 150
-
(1998)
Tellus
, vol.50
, pp. 128-150
-
-
Lelieveld, J.1
Crutzen, P.J.2
Dentener, J.F.3
-
24
-
-
0030661563
-
Characterization of microbial diversity by determining terminal restriction fragment length polymorphisms of genes encoding 16S rRNA
-
W.T. Liu, T.L. Marsh, H. Cheng, and L.J. Forney Characterization of microbial diversity by determining terminal restriction fragment length polymorphisms of genes encoding 16S rRNA Appl. Environ. Microbiol. 63 1997 4516 4522
-
(1997)
Appl. Environ. Microbiol.
, vol.63
, pp. 4516-4522
-
-
Liu, W.T.1
Marsh, T.L.2
Cheng, H.3
Forney, L.J.4
-
25
-
-
2542523843
-
ARB: A software environment for sequence data
-
W. Ludwig, O. Strunk, R. Westram, L. Richter, H. Meier, and Yadhukumar ARB: a software environment for sequence data Nucleic Acids Res. 32 2004 1363 1371
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 1363-1371
-
-
Ludwig, W.1
Strunk, O.2
Westram, R.3
Richter, L.4
Meier, H.5
Yadhukumar6
-
26
-
-
0032213991
-
Soil microbial diversity and community structure under wheat as influenced by tillage and crop rotation
-
N.Z. Lupwayi, W.A. Rice, and G.W. Clayton Soil microbial diversity and community structure under wheat as influenced by tillage and crop rotation Soil Biol. Biochem. 30 1998 1733 1741
-
(1998)
Soil Biol. Biochem.
, vol.30
, pp. 1733-1741
-
-
Lupwayi, N.Z.1
Rice, W.A.2
Clayton, G.W.3
-
27
-
-
0030733249
-
Temporal changes in the bacterial communities of soil, Rhizosphere, and Endorhiza associated with field-grown cucumber (Cucumis sativus L.)
-
W.F. Mahaffee, and J.W. Kloepper Temporal changes in the bacterial communities of soil, Rhizosphere, and Endorhiza associated with field-grown cucumber (Cucumis sativus L.) Microb. Ecol. 34 1997 210 223
-
(1997)
Microb. Ecol.
, vol.34
, pp. 210-223
-
-
Mahaffee, W.F.1
Kloepper, J.W.2
-
28
-
-
0028672043
-
Molecular genetics of methane oxidation
-
J.C. Murrell Molecular genetics of methane oxidation Biodegradation 5 1994 145 159
-
(1994)
Biodegradation
, vol.5
, pp. 145-159
-
-
Murrell, J.C.1
-
30
-
-
0027460328
-
Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16s RNA
-
G. Muyzer, E.C. DeWaal, and G. Uitterlinden Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16s RNA Appl. Environ. Microbiol. 59 1993 695 700
-
(1993)
Appl. Environ. Microbiol.
, vol.59
, pp. 695-700
-
-
Muyzer, G.1
Dewaal, E.C.2
Uitterlinden, G.3
-
31
-
-
0001350424
-
Sectoral emission inventories of greenhouse gases for 1990 on a per country basis as well as on 1×1
-
J.G.J. Olivier, A.F. Bouwman, J.J.M. Berdowski, C. Veldt, J.P.J. Bloos, and A.J.H. Visschedijk Sectoral emission inventories of greenhouse gases for 1990 on a per country basis as well as on 1×1 Environ. Sci. Policy 2 1999 241 263
-
(1999)
Environ. Sci. Policy
, vol.2
, pp. 241-263
-
-
Olivier, J.G.J.1
Bouwman, A.F.2
Berdowski, J.J.M.3
Veldt, C.4
Bloos, J.P.J.5
Visschedijk, A.J.H.6
-
32
-
-
0030814870
-
The ammonia monooxygenase structural gene amoa as a functional marker: Molecular fine-scale analysis of natural ammonia-oxidizing populations
-
J.H. Rotthauwe, K.P. Witzel, and W. Liesack The ammonia monooxygenase structural gene amoa as a functional marker: molecular fine-scale analysis of natural ammonia-oxidizing populations Appl. Environ. Microbiol. 63 1997 4704 4712
-
(1997)
Appl. Environ. Microbiol.
, vol.63
, pp. 4704-4712
-
-
Rotthauwe, J.H.1
Witzel, K.P.2
Liesack, W.3
-
35
-
-
0031764376
-
A new approach to utilize PCR-single-strand-conformation polymorphism for 16S rRNA gene-based microbial community analysis
-
F. Schwieger, and C.C. Tebbe A new approach to utilize PCR-single-strand-conformation polymorphism for 16S rRNA gene-based microbial community analysis Appl. Environ. Microbiol. 64 1998 4870 4876
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, pp. 4870-4876
-
-
Schwieger, F.1
Tebbe, C.C.2
-
36
-
-
0035462376
-
Microbial population structures in soil particle size fractions of a long-term fertilizer field experiment
-
A. Sessitsch, A. Weilharter, M.H. Gerzabek, H. Kirchmann, and E. Kandeler Microbial population structures in soil particle size fractions of a long-term fertilizer field experiment Appl. Environ. Microbiol. 67 2001 4215 4224
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 4215-4224
-
-
Sessitsch, A.1
Weilharter, A.2
Gerzabek, M.H.3
Kirchmann, H.4
Kandeler, E.5
-
37
-
-
0035487320
-
Bulk and rhizosphere soil bacterial communities studied by denaturing gradient gel electrophoresis: Plant-dependent enrichment and seasonal shifts revealed
-
K. Smalla, G. Wieland, A. Buchner, A. Zock, J. Parzy, and S. Kaiser Bulk and rhizosphere soil bacterial communities studied by denaturing gradient gel electrophoresis: plant-dependent enrichment and seasonal shifts revealed Appl. Environ. Microbiol. 67 2001 4742 4751
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 4742-4751
-
-
Smalla, K.1
Wieland, G.2
Buchner, A.3
Zock, A.4
Parzy, J.5
Kaiser, S.6
-
38
-
-
1842509942
-
Optimization of diagnostic microarray for application in analysing landfill methanotroph communities under different plant covers
-
N. Stralis-Pavese, A. Sessitsch, A. Weilharter, T. Reichenauer, J. Riesing, J. Csontos, J.C. Murrell, and L. Bodrossy Optimization of diagnostic microarray for application in analysing landfill methanotroph communities under different plant covers Environ. Microbiol. 6 2004 347 363
-
(2004)
Environ. Microbiol.
, vol.6
, pp. 347-363
-
-
Stralis-Pavese, N.1
Sessitsch, A.2
Weilharter, A.3
Reichenauer, T.4
Riesing, J.5
Csontos, J.6
Murrell, J.C.7
Bodrossy, L.8
-
39
-
-
31144441359
-
-
Springer-Verlag Berlin Heidelberg
-
S.A. Thorneloe, M.A. Barlaz, R. Peer, L.C. Huff, L. Davis, and J. Mangino Waste Management in Atmospheric Methane 2000 Springer-Verlag Berlin Heidelberg
-
(2000)
Waste Management in Atmospheric Methane
-
-
Thorneloe, S.A.1
Barlaz, M.A.2
Peer, R.3
Huff, L.C.4
Davis, L.5
Mangino, J.6
-
40
-
-
0024996412
-
Use of oligodeoxynucleotide signature probes for identification of physiological groups of methylotrophic bacteria
-
H.C. Tsien, B.J. Bratina, K. Tsuji, and R.S. Hanson Use of oligodeoxynucleotide signature probes for identification of physiological groups of methylotrophic bacteria Appl. Environ. Microbiol. 56 1990 2858 2865
-
(1990)
Appl. Environ. Microbiol.
, vol.56
, pp. 2858-2865
-
-
Tsien, H.C.1
Bratina, B.J.2
Tsuji, K.3
Hanson, R.S.4
-
41
-
-
0242407132
-
Characterization of methangenic and methanotrophic assemblages in landfill samples
-
I. Uz, M.E. Rasche, T. Townsend, A.V. Ogram, and A.S. Lindner Characterization of methangenic and methanotrophic assemblages in landfill samples Proc. R. Soc. Lond. B Biol. Sci. 270 2003 S202 S205
-
(2003)
Proc. R. Soc. Lond. B Biol. Sci.
, vol.270
-
-
Uz, I.1
Rasche, M.E.2
Townsend, T.3
Ogram, A.V.4
Lindner, A.S.5
-
42
-
-
0028091275
-
The regulation of ribosomal RNA synthesis and bacterial cell growth
-
R. Wagner The regulation of ribosomal RNA synthesis and bacterial cell growth Arch. Microbiol. 161 1994 100 109
-
(1994)
Arch. Microbiol.
, vol.161
, pp. 100-109
-
-
Wagner, R.1
-
44
-
-
0001570191
-
The methylotrophic bacteria
-
M.P. Starr Springer-Verlag Berlin, Heidelberg
-
R. Whittenbury, and H. Dalton The methylotrophic bacteria M.P. Starr The Prokaryotes: A Handbook on Habitats, Isolation, and Identification of Bacteria 1981 Springer-Verlag Berlin, Heidelberg 894 902
-
(1981)
The Prokaryotes: A Handbook on Habitats, Isolation, and Identification of Bacteria
, pp. 894-902
-
-
Whittenbury, R.1
Dalton, H.2
-
45
-
-
0032703075
-
Methanotroph diversity in landfill soil: Isolation of novel type I and type II methanotrophs whose presence was suggested by culture-independent 16S ribosomal DNA analysis
-
M.G. Wise, J.V. McArthur, and L.J. Shimkets Methanotroph diversity in landfill soil: isolation of novel type I and type II methanotrophs whose presence was suggested by culture-independent 16S ribosomal DNA analysis Appl. Environ. Microbiol. 65 1999 4887 4897
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 4887-4897
-
-
Wise, M.G.1
McArthur, J.V.2
Shimkets, L.J.3
-
46
-
-
0035068899
-
Methylosarcina fibrata gen. nov., sp. nov. and Methylosarcina quisquiliarum sp.nov., novel type 1 methanotrophs
-
M.G. Wise, J.V. McArthur, and L.J. Shimkets Methylosarcina fibrata gen. nov., sp. nov. and Methylosarcina quisquiliarum sp.nov., novel type 1 methanotrophs Int. J. Syst. Evol. Microbiol. 51 2001 611 621
-
(2001)
Int. J. Syst. Evol. Microbiol.
, vol.51
, pp. 611-621
-
-
Wise, M.G.1
McArthur, J.V.2
Shimkets, L.J.3
|