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Volumn 345, Issue 1, 2006, Pages 31-43

Reorganization of RNA polymerase II on the SV40 genome occurs coordinately with the early to late transcriptional switch

Author keywords

Chromosomes; Hyperacetylated histones; RNA polymerase II; SV40; Transcription

Indexed keywords

RNA POLYMERASE II; VIRUS RNA;

EID: 30844441204     PISSN: 00426822     EISSN: 10960341     Source Type: Journal    
DOI: 10.1016/j.virol.2005.09.039     Document Type: Article
Times cited : (19)

References (39)
  • 1
    • 0032549013 scopus 로고    scopus 로고
    • Activation of SRF-regulated chromosomal templates by Rho-family GTPases requires a signal that also induces H4 hyperacetylation
    • A.S. Alberts, O. Geneste, and R. Treisman Activation of SRF-regulated chromosomal templates by Rho-family GTPases requires a signal that also induces H4 hyperacetylation Cell 92 4 1998 475 487
    • (1998) Cell , vol.92 , Issue.4 , pp. 475-487
    • Alberts, A.S.1    Geneste, O.2    Treisman, R.3
  • 2
    • 1842839787 scopus 로고    scopus 로고
    • RNA polymerase II structure, and organization of the preinitiation complex
    • F.J. Asturias RNA polymerase II structure, and organization of the preinitiation complex Curr. Opin. Struct. Biol. 14 2 2004 121 129
    • (2004) Curr. Opin. Struct. Biol. , vol.14 , Issue.2 , pp. 121-129
    • Asturias, F.J.1
  • 3
    • 14644400380 scopus 로고    scopus 로고
    • Programmed remodeling of hyperacetylated histone H4 and H3 organization on the SV40 genome during lytic infection
    • L. Balakrishnan, and B. Milavetz Programmed remodeling of hyperacetylated histone H4 and H3 organization on the SV40 genome during lytic infection Virology 334 1 2005 111 123
    • (2005) Virology , vol.334 , Issue.1 , pp. 111-123
    • Balakrishnan, L.1    Milavetz, B.2
  • 4
    • 30844443647 scopus 로고
    • Genetic maps: Locus maps for complex genomes
    • J. Brady, and J. Pipas Genetic maps: locus maps for complex genomes Cold Spring Harbor 1 1993 1.88 1.104
    • (1993) Cold Spring Harbor , vol.1 , pp. 188-1104
    • Brady, J.1    Pipas, J.2
  • 5
    • 0034886372 scopus 로고    scopus 로고
    • Kinetic analysis of the steps of the polyomavirus lytic cycle
    • L. Chen, and M. Fluck Kinetic analysis of the steps of the polyomavirus lytic cycle J. Virol. 75 18 2001 8368 8379
    • (2001) J. Virol. , vol.75 , Issue.18 , pp. 8368-8379
    • Chen, L.1    Fluck, M.2
  • 6
    • 0037371683 scopus 로고    scopus 로고
    • RNA polymerase II accumulation in the promoter-proximal region of the dihydrofolate reductase and gamma-actin genes
    • C. Cheng, and P.A. Sharp RNA polymerase II accumulation in the promoter-proximal region of the dihydrofolate reductase and gamma-actin genes Mol. Cell. Biol. 23 6 2003 1961 1967
    • (2003) Mol. Cell. Biol. , vol.23 , Issue.6 , pp. 1961-1967
    • Cheng, C.1    Sharp, P.A.2
  • 7
    • 0035059525 scopus 로고    scopus 로고
    • Targeted histone acetylation and altered nuclease accessibility over short regions of the pea plastocyanin gene
    • Y.L. Chua, A.P. Brown, and J.C. Gray Targeted histone acetylation and altered nuclease accessibility over short regions of the pea plastocyanin gene Plant Cell 13 3 2001 599 612
    • (2001) Plant Cell , vol.13 , Issue.3 , pp. 599-612
    • Chua, Y.L.1    Brown, A.P.2    Gray, J.C.3
  • 8
    • 0019802610 scopus 로고
    • The appearance of DNase I hypersensitive sites at the 5′ end of the late SV40 genes is correlated with the transcriptional switch
    • C. Cremisi The appearance of DNase I hypersensitive sites at the 5′ end of the late SV40 genes is correlated with the transcriptional switch Nucleic Acids Res. 9 22 1981 5949 5964
    • (1981) Nucleic Acids Res. , vol.9 , Issue.22 , pp. 5949-5964
    • Cremisi, C.1
  • 9
    • 0019200950 scopus 로고
    • Cold-sensitive regulatory mutants of simian virus 40
    • D. DiMaio, and D. Nathans Cold-sensitive regulatory mutants of simian virus 40 J. Mol. Biol. 140 1 1980 129 142
    • (1980) J. Mol. Biol. , vol.140 , Issue.1 , pp. 129-142
    • Dimaio, D.1    Nathans, D.2
  • 10
    • 0019996724 scopus 로고
    • Regulatory mutants of simian virus 40. Effect of mutations at a T antigen binding site on DNA replication and expression of viral genes
    • D. DiMaio, and D. Nathans Regulatory mutants of simian virus 40. Effect of mutations at a T antigen binding site on DNA replication and expression of viral genes J. Mol. Biol. 156 3 1982 531 548
    • (1982) J. Mol. Biol. , vol.156 , Issue.3 , pp. 531-548
    • Dimaio, D.1    Nathans, D.2
  • 12
    • 0033045988 scopus 로고    scopus 로고
    • Chromatin structure of the simian virus 40 late promoter: A deletional analysis
    • M. Friez, R. Hermansen, and B. Milavetz Chromatin structure of the simian virus 40 late promoter: a deletional analysis J. Virol. 73 3 1999 1990 1997
    • (1999) J. Virol. , vol.73 , Issue.3 , pp. 1990-1997
    • Friez, M.1    Hermansen, R.2    Milavetz, B.3
  • 13
    • 0033287446 scopus 로고    scopus 로고
    • Transcriptional and structural analyses of isolated SV40 chromatin
    • Humana Press Totowa, NJ
    • U. Hansen Transcriptional and structural analyses of isolated SV40 chromatin Methods in Molecular Biology: Chromatin Protocols vol. 119 1999 Humana Press Totowa, NJ 261 290
    • (1999) Methods in Molecular Biology: Chromatin Protocols , vol.119 , pp. 261-290
    • Hansen, U.1
  • 14
    • 0029903013 scopus 로고    scopus 로고
    • Identification of Simian virus 40 promoter DNA sequences capable of conferring restriction endonuclease hypersensitivity
    • R. Hermansen, M.A. Sierra, J. Johnson, M. Friez, and B. Milavetz Identification of Simian virus 40 promoter DNA sequences capable of conferring restriction endonuclease hypersensitivity J. Virol. 70 6 1996 3416 3422
    • (1996) J. Virol. , vol.70 , Issue.6 , pp. 3416-3422
    • Hermansen, R.1    Sierra, M.A.2    Johnson, J.3    Friez, M.4    Milavetz, B.5
  • 15
    • 0024268606 scopus 로고
    • Polyomavirus early-late switch is not regulated at the level of transcription initiation and is associated with changes in RNA processing
    • R. Hyde-DeRuyscher, and G.G. Carmichael Polyomavirus early-late switch is not regulated at the level of transcription initiation and is associated with changes in RNA processing Proc. Natl. Acad. Sci. 85 23 1988 8993 8997
    • (1988) Proc. Natl. Acad. Sci. , vol.85 , Issue.23 , pp. 8993-8997
    • Hyde-Deruyscher, R.1    Carmichael, G.G.2
  • 17
    • 0034520082 scopus 로고    scopus 로고
    • Histone H4 acetylation of euchromatin and heterochromatin is cell cycle dependent and correlated with replication rather than with transcription
    • Z. Jasencakova, A. Meister, J. Walter, B.M. Turner, and I. Schubert Histone H4 acetylation of euchromatin and heterochromatin is cell cycle dependent and correlated with replication rather than with transcription Plant Cell 12 11 2000 2087 2100
    • (2000) Plant Cell , vol.12 , Issue.11 , pp. 2087-2100
    • Jasencakova, Z.1    Meister, A.2    Walter, J.3    Turner, B.M.4    Schubert, I.5
  • 18
    • 8344272750 scopus 로고    scopus 로고
    • Coregulator recruitment and histone modifications in transcriptional regulation by the androgen receptor
    • Z. Kang, O.A. Janne, and J.J. Palvimo Coregulator recruitment and histone modifications in transcriptional regulation by the androgen receptor Mol. Endocrinol. 18 11 2004 2633 2648
    • (2004) Mol. Endocrinol. , vol.18 , Issue.11 , pp. 2633-2648
    • Kang, Z.1    Janne, O.A.2    Palvimo, J.J.3
  • 20
    • 0034307008 scopus 로고    scopus 로고
    • Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription
    • P. Komarnitsky, E.J. Cho, and S. Buratowski Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription Genes Dev. 14 19 2000 2452 2460
    • (2000) Genes Dev. , vol.14 , Issue.19 , pp. 2452-2460
    • Komarnitsky, P.1    Cho, E.J.2    Buratowski, S.3
  • 21
    • 0024470273 scopus 로고
    • Generation of a nucleosome-free promoter region in SV40 does not require T-antigen binding to site I
    • D. Kube, and B. Milavetz Generation of a nucleosome-free promoter region in SV40 does not require T-antigen binding to site I Virology 172 1 1989 100 105
    • (1989) Virology , vol.172 , Issue.1 , pp. 100-105
    • Kube, D.1    Milavetz, B.2
  • 22
    • 0032142918 scopus 로고    scopus 로고
    • Roles of histone acetyltransferases and deacetylases in gene regulation
    • M.H. Kuo, and C.D. Allis Roles of histone acetyltransferases and deacetylases in gene regulation BioEssays 20 8 1998 615 626
    • (1998) BioEssays , vol.20 , Issue.8 , pp. 615-626
    • Kuo, M.H.1    Allis, C.D.2
  • 23
    • 0037317298 scopus 로고    scopus 로고
    • Formation of a tissue-specific histone acetylation pattern by the hematopoietic transcription factor GATA-1
    • D.L. Letting, C. Rakowski, M.J. Weiss, and G.A. Blobel Formation of a tissue-specific histone acetylation pattern by the hematopoietic transcription factor GATA-1 Mol. Cell. Biol. 23 4 2003 1334 1340
    • (2003) Mol. Cell. Biol. , vol.23 , Issue.4 , pp. 1334-1340
    • Letting, D.L.1    Rakowski, C.2    Weiss, M.J.3    Blobel, G.A.4
  • 24
    • 0036061538 scopus 로고    scopus 로고
    • SP1 and AP-1 elements direct chromatin remodeling in SV40 chromosomes during the first 6 hours of infection
    • B.I. Milavetz SP1 and AP-1 elements direct chromatin remodeling in SV40 chromosomes during the first 6 hours of infection Virology 294 1 2002 170 179
    • (2002) Virology , vol.294 , Issue.1 , pp. 170-179
    • Milavetz, B.I.1
  • 25
    • 1342279567 scopus 로고    scopus 로고
    • Hyperacetylation and differential deacetylation of histones H4 and H3 define two distinct classes of acetylated SV40 chromosomes early in infection
    • B. Milavetz Hyperacetylation and differential deacetylation of histones H4 and H3 define two distinct classes of acetylated SV40 chromosomes early in infection Virology 319 2 2004 324 336
    • (2004) Virology , vol.319 , Issue.2 , pp. 324-336
    • Milavetz, B.1
  • 26
    • 0031964479 scopus 로고    scopus 로고
    • Linking histone acetylation to transcriptional regulation
    • C.A. Mizzen, and C.D. Allis Linking histone acetylation to transcriptional regulation Cell. Mol. Life Sci. 54 1 1998 6 20
    • (1998) Cell. Mol. Life Sci. , vol.54 , Issue.1 , pp. 6-20
    • Mizzen, C.A.1    Allis, C.D.2
  • 27
    • 0242584447 scopus 로고    scopus 로고
    • Regulation of elongating RNA polymerase II by forkhead transcription factors in yeast
    • A. Morillon, J. O'Sullivan, A. Azad, N. Proudfoot, and J. Mellor Regulation of elongating RNA polymerase II by forkhead transcription factors in yeast Science 300 5618 2003 492 495
    • (2003) Science , vol.300 , Issue.5618 , pp. 492-495
    • Morillon, A.1    O'Sullivan, J.2    Azad, A.3    Proudfoot, N.4    Mellor, J.5
  • 28
    • 0035827534 scopus 로고    scopus 로고
    • Targeted and extended acetylation of histones H4 and H3 at active and inactive genes in chicken embryo erythrocytes
    • F.A. Myers, D.R. Evans, A.L. Clayton, A.W. Thorne, and C. Crane-Robinson Targeted and extended acetylation of histones H4 and H3 at active and inactive genes in chicken embryo erythrocytes J. Biol. Chem. 276 23 2001 20197 20205
    • (2001) J. Biol. Chem. , vol.276 , Issue.23 , pp. 20197-20205
    • Myers, F.A.1    Evans, D.R.2    Clayton, A.L.3    Thorne, A.W.4    Crane-Robinson, C.5
  • 29
    • 0030916336 scopus 로고    scopus 로고
    • What's up and down with histone deacetylation and transcription?
    • M.J. Pazin, and J.T. Kadonaga What's up and down with histone deacetylation and transcription? Cell 89 3 1997 325 328
    • (1997) Cell , vol.89 , Issue.3 , pp. 325-328
    • Pazin, M.J.1    Kadonaga, J.T.2
  • 30
    • 0026628370 scopus 로고
    • The fate of parental nucleosomes during SV40 DNA replication
    • S. Randall, and T.J. Kelly The fate of parental nucleosomes during SV40 DNA replication J. Biol. Chem. 267 1992 14259 14265
    • (1992) J. Biol. Chem. , vol.267 , pp. 14259-14265
    • Randall, S.1    Kelly, T.J.2
  • 33
    • 0028678731 scopus 로고
    • The biochemistry of transcription and gene regulation
    • R. Tijan The biochemistry of transcription and gene regulation Harvey Lect. 90 1994-1995 19 39
    • (1994) Harvey Lect. , vol.90 , pp. 19-39
    • Tijan, R.1
  • 34
    • 0003914464 scopus 로고
    • 2nd ed. Cold Spring Harbor Laboratory
    • J. Tooze DNA Tumor Viruses 2nd ed. 1981 Cold Spring Harbor Laboratory
    • (1981) DNA Tumor Viruses
    • Tooze, J.1
  • 35
    • 0025779831 scopus 로고
    • Histone acetylation and control of gene expression
    • B.M. Turner Histone acetylation and control of gene expression J. Cell Sci. 99 Pt. 1 1991 13 20
    • (1991) J. Cell Sci. , vol.99 , Issue.1 PART , pp. 13-20
    • Turner, B.M.1
  • 36
    • 0029349023 scopus 로고
    • Histone acetylation in chromatin and chromosomes
    • B.M. Turner, and L.P. O'Neill Histone acetylation in chromatin and chromosomes Semin. Cell Biol. 6 4 1995 229 236
    • (1995) Semin. Cell Biol. , vol.6 , Issue.4 , pp. 229-236
    • Turner, B.M.1    O'Neill, L.P.2
  • 37
    • 0030940298 scopus 로고    scopus 로고
    • Histone acetylation: Chromatin in action
    • P.A. Wade, D. Pruss, and A.P. Wolffe Histone acetylation: chromatin in action Trends Biochem. Sci. 22 4 1997 128 132
    • (1997) Trends Biochem. Sci. , vol.22 , Issue.4 , pp. 128-132
    • Wade, P.A.1    Pruss, D.2    Wolffe, A.P.3
  • 38
    • 0029997378 scopus 로고    scopus 로고
    • Targeting chromatin disruption: Transcription regulators that acetylate histones
    • A.P. Wolffe, and D. Pruss Targeting chromatin disruption: transcription regulators that acetylate histones Cell 84 6 1996 817 819
    • (1996) Cell , vol.84 , Issue.6 , pp. 817-819
    • Wolffe, A.P.1    Pruss, D.2
  • 39
    • 4944225950 scopus 로고    scopus 로고
    • Major histocompatibility class II transactivator (CIITA) mediates repression of collagen (COL1A2) transcription by interferon gamma (IFN-gamma)
    • Y. Xu, L. Wang, G. Buttice, P.K. Sengupta, and B.D. Smith Major histocompatibility class II transactivator (CIITA) mediates repression of collagen (COL1A2) transcription by interferon gamma (IFN-gamma) J. Biol. Chem. 279 40 2004 41319 41332
    • (2004) J. Biol. Chem. , vol.279 , Issue.40 , pp. 41319-41332
    • Xu, Y.1    Wang, L.2    Buttice, G.3    Sengupta, P.K.4    Smith, B.D.5


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