메뉴 건너뛰기




Volumn 28, Issue 3 SUPPL., 2005, Pages 501-510

Unravelling MADS-box gene family in Eucalyptus spp.: A starting point to an understanding of their developmental role in trees

Author keywords

ESTs; MADS box; Phylogenetic analysis; Reproductive development; Vegetative development

Indexed keywords

PROTEIN MADS; TRANSCRIPTION FACTOR; UNCLASSIFIED DRUG;

EID: 30844436798     PISSN: 14154757     EISSN: 16784685     Source Type: Journal    
DOI: 10.1590/s1415-47572005000400004     Document Type: Article
Times cited : (13)

References (54)
  • 4
    • 0034649566 scopus 로고    scopus 로고
    • Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
    • Arabidopsis Genome Initiative
    • Arabidopsis Genome Initiative (2000) Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408:796-815.
    • (2000) Nature , vol.408 , pp. 796-815
  • 6
    • 0345581665 scopus 로고    scopus 로고
    • The major clades of MADS-box genes and their role in the development and evolution of flowering plants
    • Becker A and Theißein G (2003) The major clades of MADS-box genes and their role in the development and evolution of flowering plants. Mol Physiolog Evol 29:464-489.
    • (2003) Mol Physiolog Evol , vol.29 , pp. 464-489
    • Becker, A.1    Theißen, G.2
  • 7
    • 0347297271 scopus 로고    scopus 로고
    • MADS-box gene expression in lateral primordia, meristems and differentiated tissues of Arabidopsis thaliana roots
    • Burgeff C, Liljegren SJ, Tapia-Lopez R, Yanofsky MF and Alvarez-Buylla ER (2002) MADS-box gene expression in lateral primordia, meristems and differentiated tissues of Arabidopsis thaliana roots. Planta 214:365-72.
    • (2002) Planta , vol.214 , pp. 365-372
    • Burgeff, C.1    Liljegren, S.J.2    Tapia-Lopez, R.3    Yanofsky, M.F.4    Alvarez-Buylla, E.R.5
  • 8
    • 0242348739 scopus 로고    scopus 로고
    • Characterization of PTM5 in aspen trees: A MADS-box gene expressed during woody vascular development
    • Cseke LJ, Zheng J and Podila GK (2003) Characterization of PTM5 in aspen trees: A MADS-box gene expressed during woody vascular development. Gene 318:55-67.
    • (2003) Gene , vol.318 , pp. 55-67
    • Cseke, L.J.1    Zheng, J.2    Podila, G.K.3
  • 10
    • 0037403366 scopus 로고    scopus 로고
    • Genome-wide structural annotation and evolutionary analysis of the type I MADS-box genes in plants
    • De Bodt S, Raes J, Florquin K, Rombauts S, Rouze P, Theißen G and Van de Peer Y (2003) Genome-wide structural annotation and evolutionary analysis of the type I MADS-box genes in plants. J Mol Evol 56:573-586.
    • (2003) J Mol Evol , vol.56 , pp. 573-586
    • De Bodt, S.1    Raes, J.2    Florquin, K.3    Rombauts, S.4    Rouze, P.5    Theißen, G.6    Van de Peer, Y.7
  • 11
    • 0033522182 scopus 로고    scopus 로고
    • A TM3-like MADS-box gene from Eucalyptus expressed in both vegetative and reproductive tissues
    • Decroocq V, Zhu X, KauVman M, Kyozuka J, Peacock WJ, Dennis ES and Llewellyn DJ (1999) A TM3-like MADS-box gene from Eucalyptus expressed in both vegetative and reproductive tissues. Gene 228:155-160.
    • (1999) Gene , vol.228 , pp. 155-160
    • Decroocq, V.1    Zhu, X.2    KauVman, M.3    Kyozuka, J.4    Peacock, W.J.5    Dennis, E.S.6    Llewellyn, D.J.7
  • 13
    • 0032742129 scopus 로고    scopus 로고
    • Large-scale statistical analyses of rice ESTs reveal correlated patterns of gene expression
    • Ewing RM, Kahla AB, Poirot O, Lopez F, Audic S and Claverie J-M (1999) Large-scale statistical analyses of rice ESTs reveal correlated patterns of gene expression. Genome Res 9:950-959.
    • (1999) Genome Res , vol.9 , pp. 950-959
    • Ewing, R.M.1    Kahla, A.B.2    Poirot, O.3    Lopez, F.4    Audic, S.5    Claverie, J.-M.6
  • 14
    • 0031278354 scopus 로고    scopus 로고
    • Specific interactions between the K domains of AG and AGLs, members of the MADS domain family of DNA binding proteins
    • Fan HY, Hu Y, Tudor M and Ma, H (1997) Specific interactions between the K domains of AG and AGLs, members of the MADS domain family of DNA binding proteins. Plant J 12:999-1010.
    • (1997) Plant J , vol.12 , pp. 999-1010
    • Fan, H.Y.1    Hu, Y.2    Tudor, M.3    Ma, H.4
  • 15
    • 0027689302 scopus 로고
    • Molecular cloning and expression patterns of three alleles of the Deficiens-homologous gene St-Deficiens from Solanum tuberosum
    • Garcia-Maroto F, Salamini F and Rohde W (1993) Molecular cloning and expression patterns of three alleles of the Deficiens-homologous gene St-Deficiens from Solanum tuberosum. Plant J 4:771-80.
    • (1993) Plant J , vol.4 , pp. 771-780
    • Garcia-Maroto, F.1    Salamini, F.2    Rohde, W.3
  • 16
    • 0343618695 scopus 로고    scopus 로고
    • Characterization of the potato MADS-box gene STMADS16 and expression analysis in tobacco transgenic plants
    • Garcia-Maroto F, Ortega N, Lozano R and Carmona MJ (2000) Characterization of the potato MADS-box gene STMADS16 and expression analysis in tobacco transgenic plants. Plant Mol Biot 42:499-513.
    • (2000) Plant Mol Biot , vol.42 , pp. 499-513
    • Garcia-Maroto, F.1    Ortega, N.2    Lozano, R.3    Carmona, M.J.4
  • 17
    • 2642701744 scopus 로고    scopus 로고
    • The FRUITFULL MADS-box gene mediates cell differentiation during Arabidopsis fruit development
    • Gu Q, Ferrándiz C, Yanofsky MF and Martienssen R (1998) The FRUITFULL MADS-box gene mediates cell differentiation during Arabidopsis fruit development. Development 125:1509-1517.
    • (1998) Development , vol.125 , pp. 1509-1517
    • Gu, Q.1    Ferrándiz, C.2    Yanofsky, M.F.3    Martienssen, R.4
  • 18
    • 0342748732 scopus 로고    scopus 로고
    • Molecular cloning of SVP: A negative regulator of the floral transition in Arabidopsis
    • Hartmann U, Hohmann S, Nettesheim K, Wisman E, Saedler H and Huijser P (2000) Molecular cloning of SVP: A negative regulator of the floral transition in Arabidopsis. Plant J 21:351-360.
    • (2000) Plant J , vol.21 , pp. 351-360
    • Hartmann, U.1    Hohmann, S.2    Nettesheim, K.3    Wisman, E.4    Saedler, H.5    Huijser, P.6
  • 19
    • 0034815699 scopus 로고    scopus 로고
    • The maize MADS box gene ZmMADS3 affects node number and spikelet development and is co-expressed with ZmMADS1 during flower development, in egg cells, and early embryogenesis
    • Heuer S, Hansen S, Bantin J, Brèttschneider R, Kranz E, Lorz H and Dresselhaus T (2001) The maize MADS box gene ZmMADS3 affects node number and spikelet development and is co-expressed with ZmMADS1 during flower development, in egg cells, and early embryogenesis. Plant Physiol 127:33-45.
    • (2001) Plant Physiol , vol.127 , pp. 33-45
    • Heuer, S.1    Hansen, S.2    Bantin, J.3    Brèttschneider, R.4    Kranz, E.5    Lorz, H.6    Dresselhaus, T.7
  • 20
    • 0029310620 scopus 로고
    • The Arabidopsis MADS-box gene AGL3 is widely expressed and encodes a sequence-specific DNA-binding protein
    • Huang H, Tudor M, Weiss CA, Hu Y and Ma. H (1995) The Arabidopsis MADS-box gene AGL3 is widely expressed and encodes a sequence-specific DNA-binding protein. Plant Mol Biol 28:549-567.
    • (1995) Plant Mol Biol , vol.28 , pp. 549-567
    • Huang, H.1    Tudor, M.2    Weiss, C.A.3    Hu, Y.4    Ma, H.5
  • 21
    • 0036010195 scopus 로고    scopus 로고
    • Isolation of MADS-box genes ftom sweet potato (Ipomoea batatas (L.) Lam.) expressed specifically in vegetative tissues
    • Kim SH, Mizuno K and Fujimura T (2002) Isolation of MADS-box genes ftom sweet potato (Ipomoea batatas (L.) Lam.) expressed specifically in vegetative tissues. Plant Cell Physiol 43:314-22.
    • (2002) Plant Cell Physiol , vol.43 , pp. 314-322
    • Kim, S.H.1    Mizuno, K.2    Fujimura, T.3
  • 22
    • 0038384463 scopus 로고    scopus 로고
    • The Polycom-group protein MEDEA regulates seed development by controlling expression of the MADS-box gene PHERES1
    • Köhler C, Hennig L, Spillane C, Pien S, Gruissem W and Grossniklaus U (2003) The Polycom-group protein MEDEA regulates seed development by controlling expression of the MADS-box gene PHERES1. Genes Dev 17:1540-1553.
    • (2003) Genes Dev , vol.17 , pp. 1540-1553
    • Köhler, C.1    Hennig, L.2    Spillane, C.3    Pien, S.4    Gruissem, W.5    Grossniklaus, U.6
  • 23
    • 0031799916 scopus 로고    scopus 로고
    • Molecular evolution of genes controlling petal and stamen development: Duplication and divergence within the APETALA3 and PISTILLATA MADS-box gene lineages
    • Kramer EM, Dorit RL and Irish VF (1998) Molecular evolution of genes controlling petal and stamen development: Duplication and divergence within the APETALA3 and PISTILLATA MADS-box gene lineages. Genetics 149:765-783.
    • (1998) Genetics , vol.149 , pp. 765-783
    • Kramer, E.M.1    Dorit, R.L.2    Irish, V.F.3
  • 24
    • 0033551359 scopus 로고    scopus 로고
    • Evolution of genetic mechanisms controlling petal development
    • Kramer EM and Irish VF (1999) Evolution of genetic mechanisms controlling petal development. Nature 399:144-148.
    • (1999) Nature , vol.399 , pp. 144-148
    • Kramer, E.M.1    Irish, V.F.2
  • 25
    • 0033695540 scopus 로고    scopus 로고
    • Evolution of the petal and stamen developmental programs: Evidence from comparative studies of lower eudicots and basal angiosperms
    • Kramer EM and Irish VF (2000) Evolution of the petal and stamen developmental programs: Evidence from comparative studies of lower eudicots and basal angiosperms. Int Plant Sc 161:S29-S40.
    • (2000) Int Plant Sc , vol.161
    • Kramer, E.M.1    Irish, V.F.2
  • 26
    • 0003496662 scopus 로고    scopus 로고
    • MEGA: Molecular Evolutionary Genetics Analysis, version 2.0
    • Pennsylvania and Arizona State University, University Park, Pennsylvania and Tempe, Arizona
    • Kumar S, Tamura K, Jacobsen I and Nei N (2000) MEGA: Molecular Evolutionary Genetics Analysis, version 2.0. Pennsylvania and Arizona State University, University Park, Pennsylvania and Tempe, Arizona.
    • (2000)
    • Kumar, S.1    Tamura, K.2    Jacobsen, I.3    Nei, N.4
  • 27
    • 0031282641 scopus 로고    scopus 로고
    • Eucalyptus has functional equivalents of the Arabidopsis AP1 gene
    • Kyozuka J, Harcourt R, Peacock WJ and Dennis ES (1997) Eucalyptus has functional equivalents of the Arabidopsis AP1 gene. Plant Mol Biol 35:573-84.
    • (1997) Plant Mol Biol , vol.35 , pp. 573-584
    • Kyozuka, J.1    Harcourt, R.2    Peacock, W.J.3    Dennis, E.S.4
  • 29
    • 0025981848 scopus 로고
    • AGL1-AGL6, an Arabidopsis gene family with similarity to floral homeotic and transcription factor genes
    • Ma H, Yanofsky MF and Meyerowitz EM (1991) AGL1-AGL6, an Arabidopsis gene family with similarity to floral homeotic and transcription factor genes. Genes Dev 5:484-495.
    • (1991) Genes Dev , vol.5 , pp. 484-495
    • Ma, H.1    Yanofsky, M.F.2    Meyerowitz, E.M.3
  • 31
    • 0030111334 scopus 로고    scopus 로고
    • Identification of two MADS box genes that are expressed in the apical meristem of the long-day plant Sinapis alba in transition to flowering
    • Menzel G, Apel K and Melzer S (1996) Identification of two MADS box genes that are expressed in the apical meristem of the long-day plant Sinapis alba in transition to flowering. Plant J 9:399-408.
    • (1996) Plant J , vol.9 , pp. 399-408
    • Menzel, G.1    Apel, K.2    Melzer, S.3
  • 32
    • 0242585465 scopus 로고    scopus 로고
    • AGL24 acts as a promoter of flowering in Arabidopsis and is positively regulated by vernalization
    • Michaels SD, Ditta G, Gustafson-Brown C, Yanofsky M and Amasino RM (2003) AGL24 acts as a promoter of flowering in Arabidopsis and is positively regulated by vernalization. Plant J 33:867-874.
    • (2003) Plant J , vol.33 , pp. 867-874
    • Michaels, S.D.1    Ditta, G.2    Gustafson-Brown, C.3    Yanofsky, M.4    Amasino, R.M.5
  • 34
    • 0036771661 scopus 로고    scopus 로고
    • The TRANSPARENT TESTA16 locus encodes the Arabidopsis BSISTER MADS domain protein and is required for proper development and pigmentation of the seed coat
    • Nesi N, Debeaujon I, Jond C, Stewart AJ, Jenkins GI, Caboche M and Lepiniec L (2002) The TRANSPARENT TESTA16 locus encodes the Arabidopsis BSISTER MADS domain protein and is required for proper development and pigmentation of the seed coat. Plant Cell 14:2463-2479.
    • (2002) Plant Cell , vol.14 , pp. 2463-2479
    • Nesi, N.1    Debeaujon, I.2    Jond, C.3    Stewart, A.J.4    Jenkins, G.I.5    Caboche, M.6    Lepiniec, L.7
  • 35
    • 0033946651 scopus 로고    scopus 로고
    • Mutagenesis of plants overexpressing CONSTANS demonstrates novel interactions among Arabidopsis flowering-time genes
    • Onouchi H, Igeno MI, Perilleux C, Graves K and Coupland G (2000) Mutagenesis of plants overexpressing CONSTANS demonstrates novel interactions among Arabidopsis flowering-time genes. Plant Cell 12:885-900.
    • (2000) Plant Cell , vol.12 , pp. 885-900
    • Onouchi, H.1    Igeno, M.I.2    Perilleux, C.3    Graves, K.4    Coupland, G.5
  • 36
    • 0034636418 scopus 로고    scopus 로고
    • B C floral organ identity functions require SEPALLATA MADS-box genes
    • Pelaz S, Ditta GS, Baumann E, Wisman E and Yanofsky MF (2000) B and C floral organ identity functions require SEPALLATA MADS-box genes. Nature 405:200-203.
    • (2000) Nature , vol.405 , pp. 200-203
    • Pelaz, S.1    Ditta, G.S.2    Baumann, E.3    Wisman, E.4    Yanofsky, M.F.5
  • 38
    • 0036007975 scopus 로고    scopus 로고
    • PkMADS1 is a novel MADS box gene regulating adventitious shoot induction and vegetative shoot development in Paulownia kawakamii
    • Prakash AP and Kumar PP (2002) PkMADS1 is a novel MADS box gene regulating adventitious shoot induction and vegetative shoot development in Paulownia kawakamii. Plant J 29:141-51.
    • (2002) Plant J , vol.29 , pp. 141-151
    • Prakash, A.P.1    Kumar, P.P.2
  • 39
    • 0030666154 scopus 로고    scopus 로고
    • MADS domain proteins in plant development
    • Riechmann JL and Meyerowitz EM (1997) MADS domain proteins in plant development. Biol Chem 378:1079-1101.
    • (1997) Biol Chem , vol.378 , pp. 1079-1101
    • Riechmann, J.L.1    Meyerowitz, E.M.2
  • 40
    • 0029346927 scopus 로고
    • Diverse roles for MADS box genes in Arabidopsis development
    • Rounsley SD, Ditta GS and Yanofsky MF (1995) Diverse roles for MADS box genes in Arabidopsis development. Plant Cell 7:1259-1269.
    • (1995) Plant Cell , vol.7 , pp. 1259-1269
    • Rounsley, S.D.1    Ditta, G.S.2    Yanofsky, M.F.3
  • 41
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou N and Nei M (1987) The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406-25.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 43
    • 0028934434 scopus 로고
    • The MADS-box family on transcriptional factors
    • Shore P and Sharrocks AD (1995) The MADS-box family on transcriptional factors. Eur J Biochem 229:1-13.
    • (1995) Eur J Biochem , vol.229 , pp. 1-13
    • Shore, P.1    Sharrocks, A.D.2
  • 44
    • 0028985519 scopus 로고
    • Interior-branch and bootstrap tests of phylogenetic trees
    • Sitnikova T, Rzhetsky A and Nei M (1995) Interior-branch and bootstrap tests of phylogenetic trees. Mol Biol Evol 12:319-33.
    • (1995) Mol Biol Evol , vol.12 , pp. 319-333
    • Sitnikova, T.1    Rzhetsky, A.2    Nei, M.3
  • 45
    • 0036095416 scopus 로고    scopus 로고
    • Genes from the APETALA3 and PISTILLATA lineages are expressed in developing vascular bundles of the tuberous rhizome, flowering stem and flower primordia of Eranthis hyemalis
    • Skipper M (2002) Genes from the APETALA3 and PISTILLATA lineages are expressed in developing vascular bundles of the tuberous rhizome, flowering stem and flower primordia of Eranthis hyemalis. Annals of Botany 89:83-88.
    • (2002) Annals of Botany , vol.89 , pp. 83-88
    • Skipper, M.1
  • 46
    • 0029109360 scopus 로고
    • Conifer homologues to genes that control floral development in angiosperms
    • Tandre K, Albert VA, Sundas A and Engstrom P (1995) Conifer homologues to genes that control floral development in angiosperms. Plant Mol Biol 27:69-78.
    • (1995) Plant Mol Biol , vol.27 , pp. 69-78
    • Tandre, K.1    Albert, V.A.2    Sundas, A.3    Engstrom, P.4
  • 48
    • 0037058916 scopus 로고    scopus 로고
    • AGAMOUS-like 24, a dosage-dependent mediator of the flowering signals
    • Yu H, Xu Y, Tan EL and Kumar PP (2002) AGAMOUS-like 24, a dosage-dependent mediator of the flowering signals. Proc Natl Acad Sci USA 99:16336-41.
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 16336-16341
    • Yu, H.1    Xu, Y.2    Tan, E.L.3    Kumar, P.P.4
  • 49
    • 0842289256 scopus 로고    scopus 로고
    • Repression of AGAMOUS-like 24 is a crucial step in promoting flower development
    • Yu H, Ito T, Wellmer F and Meyerowitz EM (2004) Repression of AGAMOUS-like 24 is a crucial step in promoting flower development. Nat Genet 2004 36:157-61.
    • (2004) Nat Genet 2004 , vol.36 , pp. 157-161
    • Yu, H.1    Ito, T.2    Wellmer, F.3    Meyerowitz, E.M.4
  • 50
    • 0032561703 scopus 로고    scopus 로고
    • A large family of TM3 MADS-box cDNAs in Pinus radiate includes two members with deletions of the conserved K domain
    • Walden AR, Wang DY, Walter C and Gardner RC (1998) A large family of TM3 MADS-box cDNAs in Pinus radiate includes two members with deletions of the conserved K domain. Plant Sci 138:167-176.
    • (1998) Plant Sci , vol.138 , pp. 167-176
    • Walden, A.R.1    Wang, D.Y.2    Walter, C.3    Gardner, R.C.4
  • 51
    • 0033595002 scopus 로고    scopus 로고
    • MADS-box genes reveal that gnetophytes are more closely related to conifers than to flowering plants
    • Winter KU, Becker A, Münster T, Kim JT, Saedler H and Theissen G (1999) MADS-box genes reveal that gnetophytes are more closely related to conifers than to flowering plants. Proc Natl Acad Sci USA 96:7342-7.
    • (1999) Proc Natl Acad Sci USA , vol.96 , pp. 7342-7347
    • Winter, K.U.1    Becker, A.2    Münster, T.3    Kim, J.T.4    Saedler, H.5    Theissen, G.6
  • 52
    • 0031149484 scopus 로고    scopus 로고
    • Pollen-specific expression of DEFH125, a MADS-box transcription factor in Antirrhinum with unusual features
    • Zachgo S, Saedler H and Schwarz-Sommer Z (1997) Pollen-specific expression of DEFH125, a MADS-box transcription factor in Antirrhinum with unusual features. Plant J 11:1043-50.
    • (1997) Plant J , vol.11 , pp. 1043-1050
    • Zachgo, S.1    Saedler, H.2    Schwarz-Sommer, Z.3
  • 53
    • 0033979763 scopus 로고    scopus 로고
    • Regulation of Arabidopsis root development by nitrate availability
    • Zhang H and Forde BG (2000) Regulation of Arabidopsis root development by nitrate availability. J Exp Bot 51:51-59.
    • (2000) J Exp Bot , vol.51 , pp. 51-59
    • Zhang, H.1    Forde, B.G.2
  • 54
    • 0032536001 scopus 로고    scopus 로고
    • An Arabidopsis MADS box gene that controls nutrient-induced changes in root architecture
    • Zhang H and Forde BG (1998) An Arabidopsis MADS box gene that controls nutrient-induced changes in root architecture. Science 279:407-409.
    • (1998) Science , vol.279 , pp. 407-409
    • Zhang, H.1    Forde, B.G.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.