Cloning and expression in E. coli of the genes responsible for degradation of 4-chlorobenzoate and 4-chlorocatechol from Pseudomonas sp. strain S-47

Journal of Microbiology

Volumn 36, Issue 2, 1998, Pages 99-105

  Kim, Ki Pil ^a   Seo, Dong In ^a   Lee, Dong Hun ^a   Kim, Youngsoo ^a   Kim, Chi Kyung ^a  

^a Chungbuk National University   (South Korea)

Author keywords

4 Chlorocatechol; benABCD; Dioxygenase; Pseudomonas sp. S 47; xylE 4 chlorobenzoate

Indexed keywords

EID: 3042983248     PISSN: 12258873     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (23)

1. Bertini, I., F. Brigant, S. Mangai, H.F. Nolting, and A. Scozzafava. 1994. X-ray absorption studies on catechol 2,3-dioxygenase from Pseudomonas putida mt2. Biochemstry 33, 10777-10784.
2. Birnboim, H.C., and J. Doly. 1979. A rapid alkaline extract procedure for screening recombinant plasmid DNA. Nucleic Acids Res. 7, 1513-1523.
3. Carrington, B., A. Lowe, L.E. Shaw, and P.A. Williams. 1994. The lower pathway operon for benzoate catabolism in biphenyl-utilizing Pseudomonas sp. strain IC and the nucleotide sequence of the bphE gene catechol 2, 3-dioxygenase. Microbiology 140, 499-508.
4. Eulberg, D., L.A. Golovleva, and M. Schl mann. 1997. Characterization of catechol catabolic genes from Rhodococcus erythropolis 1CP. J. Bacteriol. 179, 370-381.
5. Harayama, S., and M. Rekik. 1989. Bacterial aromatic ring-cleavage enzymes are classified into two different gene families. J. Biol. Chem. 264, 15328-15333.
6. Harayama, S., and M. Rekik, K. Ngai, and L.N. Ornston. 1989. Physically associated enzymes produce and metabolize 2-hydroxy-2,4-dienoate, a chemically unstable intermediate formed in catechol metabolism via meta cleavage in Pseudomonas putida. J. Bacteriol. 171, 6251-6258.
7. Harayama, S., M. Rekik, A. Bairoch, E.L. Neidle, and L. N. Ornston. 1991. Potential DNA slippage structures acquired during evolutionary divergence of acinetogbacte calcoaceticus chromosomal benABC and Pseudomonas putida TOL pWWO plasmid xylXYZ, genes encoding benzoate dioxygenases. J. Bacetriol. 173, 7540-7548.
8. Irie, S., S. Doi, T. Yorifuji, M. Takagi, and K. Yano. 1987. Nucleotide sequending and characterization of the genes encoding benzene oxidation enzymes of Pseudomonas putida. J. Bacteriol. 169, 5174-5179.
9. Jeffrey, W., S.M. Cuskey, P.J. Chapman, S. Resnick, and R.H. Olsen. 1992. Characterization of Pseudomnas putida mutants unable to catabolize benzoate: cloning and characterization of Pseudomonas genes involved in benzoate catabolism and isolation of a chromosomal DNA fragment able to substitute for xylS in activation of the TOL lower-pathway promoter. J. Bacteriol. 174, 4986-4996.
10. Kim, K.P., D.I. Seo, K.H. Min, J.O. Ka, Y.K Park, and C.K. Kim. 1997. Characterization of catechol 2,3-dioxygenase produced by 4-chlorobenzoate-degrading Pseudomonas sp. S-47. J. Microbiol. 35, 295-299.
11. Kim, E., and G.J. Zylstra. 1995. Molecular and biochemical characterization of two meta-cleavage dioxygenases involved in biphenyl and m-xylene degradation by Beijerinckia sp. strain B1. J. Bacteriol. 177, 3095-3103.
12. Neidle, E.L., C. Hartnett, L.N. Ornston, A. Bairoch, M. Rekik, and S. Harayama. 1991. Nucleotide sequence of the Acinetobacter calcoaceticus benABCD genes for benzoate 1,2-dioxygenase reveal evolutionary relationship among multicomponent oxygenases. J. Bacteriol. 173, 5385-5395.
13. Neidle, E.L., M.K. Shapiro, and N. Ornston. 1987. Cloning and expression in Escherichia coli of Acinetobacter calcoaceticus genes for benzoate degradation. J. Bacteriol. 169, 5496-5503.
14. Oh, J.M., E. Kang, K.R. Min, C. K. Kim, Y.C. Kim, J. Y. Lim, K.S. Lee, K.H. Min, and Y. Kim. 1997. Structure of catechol 2,3-dioxygenase gene encoded in TOM plasmid of Pseudomonas cepacia G4. Biochem. Biophys. Res. Comm. 234, 578-581.
15. Sambrook, J., E.F. Fritsch, and T. Maniatis. 1989. Molecular cloning. A laboratory manual. Cold Spring Habor Laboratory, Cold Spring Harbor, N.Y.
16. Savard, P., L.P loquin, and M. Sylvestre. 1986. Cloning of Pseudomonas sp. strain CBS3 genes specifying behalogenation of 4-chlorobenzoate. J. Bacteriol. 168, 81-85.
17. Seo, D.I., J.Y. Lim, Y.C. Kim, K.H. Min, and C.K. Kim. 1997. Isolation of Pseudomonas sp. S-47 and its degradation of 4-chlorobenzoic acid. J. Microbiol. 35, 188-192.
18. Shingler, V., J. Powloski, and U. Marklund. 1992. Nucleotide sequence and functional analysis of the complete phenol/3,4-dimethylphenol catabolic pathway of Pseudomonas sp. strain CF600. J. Bacteriol. 174, 711-724.
19. Taira, K., J. Hirose, S. Harayama, and K. Furukawa. 1992. Analysis of bph operon from the polychlorinated biphenyl-degradaing strain of Pseudomonas pseudoalcaligenes KF707. J. Biol. Chem. 267, 4844-4853.
20. Werlen, C., H.E. Kohler, and J.R. van der Meer. 1996. The broad substrate chlorobenzene dioxygenase and cis-chlorobenzene dihydrodiol dehydrogenase of Pseudomonas sp. strain P51 are linked evolutionarily to the enzymes for benzene and toluene degradation. J. Biol. Chem. 271, 4009-4016.
21. Zylstra, G.J., and D.T. Gibson. 1989. Toluene degradation by Pseudomonas putida F1. J. Biol. Chem. 264, 14940-14946.
22. Zylstra, G.J., W.R. McCombie, D.T. Gibson, and B.A. Finette. 1988. Toluene degradation by Pseudomonas putida F1: genetic organization of the tod operon. Appl. Environ. Microbiol. 54, 1498-1503.
23. Zylstra, G.J., L.P. Wackett, and D.T. Gibson. 1989. Trichloroethylene degradation by Escherichia coli containing the cloned Pseudomonas putida F1 toluene dioxygenase genes. Appl. Environ. Microbiol. 55, 3162-3166.