Phylogenetic relationships between Clerodendrum (Lamiaceae) and other Ajugoid genera inferred from nuclear and chloroplast DNA sequence data

Molecular Phylogenetics and Evolution

Volumn 32, Issue 1, 2004, Pages 39-45

  Steane, Dorothy A ^a   De Kok, Rogier P J ^b   Olmstead, Richard G ^c  

^a UNIVERSITY OF TASMANIA   (Australia)

^b ROYAL BOTANIC GARDENS   (United Kingdom)

^c UNIVERSITY OF WASHINGTON   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA; RIBOSOME RNA;

ARTICLE; CELL NUCLEUS; CHLOROPLAST; CLERODENDRUM; GENE; GENETICS; METABOLISM; PHYLOGENY; SPECIES DIFFERENCE; STATISTICAL MODEL;

CELL NUCLEUS; CHLOROPLASTS; CLERODENDRUM; DNA; GENES, PLANT; LIKELIHOOD FUNCTIONS; PHYLOGENY; RNA, RIBOSOMAL; SPECIES SPECIFICITY;

AEGIPHILA; AMASONIA; CLERODENDRUM; HUXLEYA; KALAHARIA; LAMIACEAE; MAGNOLIOPHYTA;

EID: 3042825415     PISSN: 10557903     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ympev.2003.11.011     Document Type: Article

References (35)

1. Baillon H.E. Kalaharia, Histoire des Plantes XI. 1892;Hachette, Paris. p. 111
2. Barker F.K, Lutzoni F.M. The utility of the Incongruence Length Difference test. Syst. Biol. 51:2002;625-637
3. Cantino P.D. Toward a phylogenetic classification of the Labiatae. Harley R.M, Reynolds T. Advances in Labiate Science. 1992;27-37 Royal Botanic Gardens, Kew
4. Cantino P.D. Evidence for a polyphyletic origin of the Labiatae. Ann. Missouri Bot. Gard. 79:1992;361-379
5. Cantino P.D, Harley R.M, Wagstaff S.J. Genera of Labiatae: status and classification. Harley R.M, Reynolds T. Advances in Labiate Science. 1992;511-522 Royal Botanic Gardens, Kew
6. Cantino P.D, Olmstead R.G, Wagstaff S.J. A comparison of phylogenetic nomenclature with the current system: a botanical case study. Syst. Biol. 46:1997;313-331
7. Chase M.W, Hills H.H. Silica gel: an ideal material for field preservation of leaf samples for DNA studies. Taxon. 40:1991;215-220
8. DeBry R.W, Olmstead R.G. A simulation study of reduced tree-search effort in bootstrap resampling analysis. Syst. Biol. 49:2000;171-179
9. De Kok, R.P.J., 1997. The biology and systematics of Oxera, Faradaya, and Hosea (Labiatae). PhD Thesis, University of Oxford, copies at L, K, OXF, and NSW
10. De Kok R.P.J, Grayer R.J, Kite G.C. Relationships of the endemic Australian genus Huxleya Ewart & Rees (Labiatae) based on fruit and flavonoid characters. Aust. Syst. Bot. 13:2000;425-428
11. De Necker, N.J., 1790. Plasyrgophytorum, In: Elementa Botanica I. Neowedae, pp. 359-389
12. Doyle J.J, Doyle J.L. Isolation of plant DNA from fresh tissue. Focus. 12:1990;13-15
13. Ewart, A.J., Rees, B., 1912. Contributions to the flora of Australia, No. 19. Proceedings of the Royal Society of Victoria NS 25 109, Pl 5.
14. Farris J.S, Källersjö M, Kluge A.G, Bult C. Testing significance of incongruence. Cladistics. 10:1994;315-319
15. Herman P.P.J, Retief E. Lamiaceae. New combinations in the genus Rotheca in Southern Africa. Bothalia. 32:2002;81
16. Huelsenbeck J.P, Ronquist F.R. MRBAYES: Bayesian inference of phylogeny. Bioinformatics. 17:2001;751-755
17. Moldenke H.N. Notes on the genus Clerodendrum (Verbenaceae) IV. Phytologia. 57:1985;334-365
18. Olmstead R.G, Reeves P.A. Evidence for the polyphyly of the Scrophulariaceae, based on chloroplast rbc L and ndhF sequences. Ann. Missouri Bot. Gard. 82:1995;176-193
19. Olmstead R.G, Sweere J.A. Combining data in phylogenetic systematics: an empirical approach using three molecular data sets in the Solanaceae. Syst. Biol. 43:1994;467-481
20. Pearson H.H.W. Verbenaceae. Thiselton-Dyer W. Flora Capensis V (1). 1912;180-226 Reeve & Co, London
21. Posada D, Crandall K.A. Modeltest: testing the model of DNA substitution. Bioinformatics. 14:1998;817-818
22. Raj B. A contribution to the pollen morphology of Verbenaceae. Rev. Palaeobot. Palynol. 39:1983;343-422
23. Rimpler H, Winterhalter C, Falk U. Cladistic analysis of the subfamily Caryopteridoideae Briq. and related taxa of Verbenaceae and Lamiaceae using morphological and chemical characters. Harley R.M, Reynolds T. Advances in Labiate Science. 1992;39-54 Royal Botanic Gardens, Kew
24. Schinz H. Beiträge zur Kenntnis der Flora von Deutsch-Südwest Afrika und der angrenzenden Gebiete. Verh. Bot. ver. Brandenb. 31:1890;179-230
25. Simmons M.P, Ochoterena H. Gaps as characters in sequence-based phylogenetic analyses. Syst. Biol. 49:2000;369-381
26. Steane D.A, Scotland R.W, Mabberley D.J, Wagstaff S.J, Reeves P.A, Olmstead R.G. Phylogenetic relationships of Clerodendrum s.l. (Lamiaceae) inferred from chloroplast DNA. Syst. Bot. 22:1997;229-243
27. Steane D.A, Scotland R.W, Mabberley D.J, Olmstead R.G. Molecular systematics of Clerodendrum (Lamiaceae): ITS sequences and total evidence. Am. J. Bot. 86:1999;98-107
28. Steane D.A, Mabberley D.J. Rotheca (Lamiaceae) revived. Novon. 8:1998;204-206
29. Stenzel E, Heni J, Rimpler H, Vogellehner D. Phenetic relationships in Clerodendrum (Verbenaceae) and some phylogenetic considerations. Plant Syst. Evol. 159:1988;257-271
30. Swofford, D.L., 2002. PAUP*. Phylogenetic analysis using parsimony (* and other methods), Version 4. Sinauer, Sunderland, Massachusetts, USA
31. Thomas B. Die Gattung Clerodendrum in Afrika. Bot. Jahrb. Syst. 68:1936;1-106
32. Verdcourt B. Clerodendrum. Polhill R.M. Flora of Tropical East Africa. 1992;84-144 Balkema, Rotterdam
33. Westman, D.J., 1744. Plantae Baccatae, In: Linnaeus, C. (Ed.), Oratorio de Telluris Habitabilis Incremento. Batavorum, Leiden, pp. 59-61
34. Wolfe F.A. Neogene floristic and vegetational history of the Pacific northwest. Madrono. 20:1969;83-110
35. Yoder A.D, Irwin J.A, Payseur B.A. Failure of the ILD to determine data combinability for Slow Loris phylogeny. Syst. Biol. 50:2001;408-424