메뉴 건너뛰기




Volumn 1, Issue , 2001, Pages

High correlation between the turnover of nucleotides under mutational pressure and the DNA composition

Author keywords

[No Author keywords available]

Indexed keywords

BORRELIA; BORRELIA BURGDORFERI;

EID: 3042648616     PISSN: 14712148     EISSN: None     Source Type: Journal    
DOI: 10.1186/1471-2148-1-13     Document Type: Article
Times cited : (32)

References (32)
  • 1
    • 3643052747 scopus 로고
    • On the genetic basis of variation and heterogeneity of DNA base composition
    • Sueoka N: On the genetic basis of variation and heterogeneity of DNA base composition. Proc Natl Acad Sci USA 1962, 48:582-591
    • (1962) Proc Natl Acad Sci USA , vol.48 , pp. 582-591
    • Sueoka, N.1
  • 2
    • 0029985398 scopus 로고    scopus 로고
    • Asymmetric substitution patterns in the two DNA strands of bacteria
    • Lobry JR: Asymmetric substitution patterns in the two DNA strands of bacteria. Mol Biol Evol 1996, 13:660-665
    • (1996) Mol Biol Evol , vol.13 , pp. 660-665
    • Lobry, J.R.1
  • 4
    • 0032524384 scopus 로고    scopus 로고
    • Analyzing genomes with cumulative skew diagrams
    • Grigoriev A: Analyzing genomes with cumulative skew diagrams. Nucleic Acids Res 1998, 26:2286-2290
    • (1998) Nucleic Acids Res , vol.26 , pp. 2286-2290
    • Grigoriev, A.1
  • 5
    • 0032417093 scopus 로고    scopus 로고
    • Base composition skews, replication orientation, and gene orientation in 12 prokaryote genomes
    • McLean MJ, Wolfe KH, Devine K: Base composition skews, replication orientation, and gene orientation in 12 prokaryote genomes. J Mol Evol 1998, 47:691-696
    • (1998) J Mol Evol , vol.47 , pp. 691-696
    • McLean, M.J.1    Wolfe, K.H.2    Devine, K.3
  • 6
    • 0032584101 scopus 로고    scopus 로고
    • Strand compositional asymmetry in bacterial and large viral genomes
    • Mrazek J, Karlin S: Strand compositional asymmetry in bacterial and large viral genomes. Proc Natl Acad Sci USA 1998, 95:3720-3725
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 3720-3725
    • Mrazek, J.1    Karlin, S.2
  • 7
    • 0032805876 scopus 로고    scopus 로고
    • A comparative genomics approach to DNA asymmetry
    • Francino MP, Ochman H: A comparative genomics approach to DNA asymmetry. Ann N Y Acad Sci 1999, 870:428-431
    • (1999) Ann N Y Acad Sci , vol.870 , pp. 428-431
    • Francino, M.P.1    Ochman, H.2
  • 9
    • 0032910674 scopus 로고    scopus 로고
    • Universal replication biases in bacteria
    • Rocha EP, Danchin A, Viari A: Universal replication biases in bacteria. Mol Microbiol 1999, 32:11-16
    • (1999) Mol Microbiol , vol.32 , pp. 11-16
    • Rocha, E.P.1    Danchin, A.2    Viari, A.3
  • 10
    • 0032860238 scopus 로고    scopus 로고
    • Asymmetric substitution patterns: A review of possible underlying mutational or selective mechanisms
    • Frank AC, Lobry JR: Asymmetric substitution patterns: a review of possible underlying mutational or selective mechanisms. Gene 1999, 238:65-77
    • (1999) Gene , vol.238 , pp. 65-77
    • Frank, A.C.1    Lobry, J.R.2
  • 11
    • 0032999415 scopus 로고    scopus 로고
    • How does replication-associated mutational pressure influence amino acid composition of proteins?
    • Mackiewicz P, Gierlik A, Kowalczuk M, Dudek MR, Cebrat S: How does replication-associated mutational pressure influence amino acid composition of proteins? Genome Res 1999, 9:409-416
    • (1999) Genome Res , vol.9 , pp. 409-416
    • Mackiewicz, P.1    Gierlik, A.2    Kowalczuk, M.3    Dudek, M.R.4    Cebrat, S.5
  • 12
    • 0033935187 scopus 로고    scopus 로고
    • The contributions of replication orientation, gene direction, and signal sequences to base-composition asymmetries in bacterial genomes
    • Tillier ER, Collins RA: The contributions of replication orientation, gene direction, and signal sequences to base-composition asymmetries in bacterial genomes. J Mol Evol 2000, 50:249-257
    • (2000) J Mol Evol , vol.50 , pp. 249-257
    • Tillier, E.R.1    Collins, R.A.2
  • 13
    • 0000204878 scopus 로고
    • Evolution of long-range fractal correlations and 1/f noise in DNA base sequences
    • Voss R: Evolution of long-range fractal correlations and 1/f noise in DNA base sequences. Phys Rev Lett 1992, 68:3805-3808
    • (1992) Phys Rev Lett , vol.68 , pp. 3805-3808
    • Voss, R.1
  • 15
    • 0021710490 scopus 로고
    • Nonrandomness of point mutation as reflected in nucleotide substitutions in pseudogenes and its evolutionary implications
    • Li WH, Wu CI, Luo CC: Nonrandomness of point mutation as reflected in nucleotide substitutions in pseudogenes and its evolutionary implications. J Mol Evol 1984, 21:58-71
    • (1984) J Mol Evol , vol.21 , pp. 58-71
    • Li, W.H.1    Wu, C.I.2    Luo, C.C.3
  • 16
    • 0028214103 scopus 로고
    • Estimating the pattern of nucleotide substitution
    • Yang Z: Estimating the pattern of nucleotide substitution. J Mol Evol 1994, 39:105-111
    • (1994) J Mol Evol , vol.39 , pp. 105-111
    • Yang, Z.1
  • 17
    • 0346400952 scopus 로고    scopus 로고
    • Mechanisms generating long-range correlation in nucleocide composition of the Borrelia burgdorferi
    • Mackiewicz P, Gierlik A, Kowalczuk M, Szczepanik D, Dudek MR, Cebrat S: Mechanisms generating long-range correlation in nucleocide composition of the Borrelia burgdorferi. Physica A 1999, 273:103-115
    • (1999) Physica A , vol.273 , pp. 103-115
    • Mackiewicz, P.1    Gierlik, A.2    Kowalczuk, M.3    Szczepanik, D.4    Dudek, M.R.5    Cebrat, S.6
  • 19
    • 0345982307 scopus 로고    scopus 로고
    • Optimization of gene sequences under constant mutational pressure and slection
    • Kowalczuk M, Gierlik A, Mackiewicz P, Cebrat S, Dudek MR: Optimization of gene sequences under constant mutational pressure and slection. Physica A 1999, 273:116-131
    • (1999) Physica A , vol.273 , pp. 116-131
    • Kowalczuk, M.1    Gierlik, A.2    Mackiewicz, P.3    Cebrat, S.4    Dudek, M.R.5
  • 20
    • 0026703303 scopus 로고
    • The rate and pattern of nucleotide substitution in Drosophila mitochondrial DNA
    • Tamura K: The rate and pattern of nucleotide substitution in Drosophila mitochondrial DNA. Mol Biol Evol 1992, 9:814-825
    • (1992) Mol Biol Evol , vol.9 , pp. 814-825
    • Tamura, K.1
  • 21
    • 0030053964 scopus 로고    scopus 로고
    • Tempo and mode of synonymous substitutions in mitochondrial DNA of primates
    • Adachi J, Hasegawa M: Tempo and mode of synonymous substitutions in mitochondrial DNA of primates. Mol Biol Evol 1996, 13:200-208
    • (1996) Mol Biol Evol , vol.13 , pp. 200-208
    • Adachi, J.1    Hasegawa, M.2
  • 22
    • 0033015735 scopus 로고    scopus 로고
    • Performance of likelihood ratio tests of evolutionary hypotheses under inadequate substitution models
    • Zhang J: Performance of likelihood ratio tests of evolutionary hypotheses under inadequate substitution models. Mol Biol Evol 1999, 16:868-875
    • (1999) Mol Biol Evol , vol.16 , pp. 868-875
    • Zhang, J.1
  • 23
    • 0024290622 scopus 로고
    • Why the rate of silent codon substitutions is variable within a vertebrate's genome
    • Filipski J: Why the rate of silent codon substitutions is variable within a vertebrate's genome. J Theor Biol 1988, 134:159-164
    • (1988) J Theor Biol , vol.134 , pp. 159-164
    • Filipski, J.1
  • 24
    • 0024497416 scopus 로고
    • Mutation rates differ among regions of the mammalian genome
    • Wolfe KH, Sharp PM, Li WH: Mutation rates differ among regions of the mammalian genome. Nature 1989, 337:283-285
    • (1989) Nature , vol.337 , pp. 283-285
    • Wolfe, K.H.1    Sharp, P.M.2    Li, W.H.3
  • 25
    • 0033615073 scopus 로고    scopus 로고
    • Chromosomal location effects on gene sequence evolution in mammals
    • Matassi G, Sharp PM, Gautier C: Chromosomal location effects on gene sequence evolution in mammals. Curr Biol 1999, 9:786-791
    • (1999) Curr Biol , vol.9 , pp. 786-791
    • Matassi, G.1    Sharp, P.M.2    Gautier, C.3
  • 27
    • 0023989064 scopus 로고
    • Improved tools for biological sequence comparison
    • Pearson WR, Lipman DJ: Improved tools for biological sequence comparison. Proc Natl Acad Sci USA 1988, 85:2444-2448
    • (1988) Proc Natl Acad Sci USA , vol.85 , pp. 2444-2448
    • Pearson, W.R.1    Lipman, D.J.2
  • 29
    • 0020317308 scopus 로고
    • Patterns of nucleotide substitution in pseudogenes and functional genes
    • Gojobori T, Li WH, Graur D: Patterns of nucleotide substitution in pseudogenes and functional genes. J Mol Evol 1982, 18:360-369
    • (1982) J Mol Evol , vol.18 , pp. 360-369
    • Gojobori, T.1    Li, W.H.2    Graur, D.3
  • 30
    • 0033993628 scopus 로고    scopus 로고
    • Strand symmetry around the beta-globin origin of replication in primates
    • Francino MP, Ochman H: Strand symmetry around the beta-globin origin of replication in primates. Mol Biol Evol 2000, 17:416-422
    • (2000) Mol Biol Evol , vol.17 , pp. 416-422
    • Francino, M.P.1    Ochman, H.2
  • 31
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura M: A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 1980, 16:111-120
    • (1980) J Mol Evol , vol.16 , pp. 111-120
    • Kimura, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.