Comparisons of methods for linkage analysis and haplotype reconstruction using extended pedigree data

BMC Genetics

Volumn 6, Issue SUPPL.1, 2005, Pages

  Lin, Shili ^a   Ding, Jie ^a   Dong, Crystal ^a   Liu, Zhenqiu ^a   Ma, Zhenxu J ^b   Wan, Shuyan ^a   Xu, Yan ^a  

^a OHIO STATE UNIVERSITY   (United States)

^b BATTELLE MEMORIAL INSTITUTE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CHROMOSOME 1; CHROMOSOME 3; CHROMOSOME 5; CHROMOSOME 9; COMPUTER PROGRAM; COMPUTER SIMULATION; CONTROLLED STUDY; FOLLOW UP; GENETIC ALGORITHM; GENETIC RECOMBINATION; HAPLOTYPE MAP; HUMAN; INTERMETHOD COMPARISON; LINKAGE ANALYSIS; MICROSATELLITE MARKER; MONTE CARLO METHOD; PEDIGREE ANALYSIS; SINGLE NUCLEOTIDE POLYMORPHISM; UNITED STATES; CHROMOSOME MAP; COMPARATIVE STUDY; FEMALE; GENETIC DATABASE; GENETICS; HAPLOTYPE; MALE; METHODOLOGY; NONPARAMETRIC TEST; PEDIGREE;

CHROMOSOME MAPPING; DATABASES, GENETIC; FEMALE; HAPLOTYPES; HUMANS; MALE; PEDIGREE; RECOMBINATION, GENETIC; SOFTWARE; STATISTICS, NONPARAMETRIC;

EID: 30344471415     PISSN: None     EISSN: 14712156     Source Type: Journal    
DOI: 10.1186/1471-2156-6-S1-S76     Document Type: Article

References (5)

1. Kruglyak L, Daly MJ, Reeve-Daly MP, Lander ES: Parametric and nonparametric linkage analysis: A unified multipoint approach. Am J Hum Genet 1996, 58:1347-1363.
2. Skrivanek Z, Lin S, Irwin M: Linkage analysis with sequential imputation. Genet Epidemiol 2003, 25:25-35.
3. Li J, Jiang T: PedPhase: Haplotype Inference for Pedigree Data. [http://www.cs.ucr.edu/~jili/haplotyping.html].
4. Lin S, Cheng R, Wright F: Genetic crossover interference in the human genome. Ann Hum Genet 2001, 65:79-93.
5. Lin S, Skrivanek Z, Irwin M: Haplotyping using SIMPLE - caution on ignoring interference. Genet Epidemiol 2003, 25:384-387.