Physical and biochemical properties of mammalian DNase X proteins: Non-AUG translation initiation of porcine and bovine mRNAs for DNase X

Biochemical Journal

Volumn 392, Issue 3, 2005, Pages 511-517

  Shiokawa, Daisuke ^a   Shika, Yukari ^a   Saito, Kazuki ^a   Yamazaki, Kosuke ^a   Tanuma, Sei Ichi ^a  

^a TOKYO UNIVERSITY OF SCIENCE   (Japan)

Author keywords

cDNA cloning; DNase X; Glycosylation; Muscle; Translation initiation

Indexed keywords

CLONING; HYDROPHOBICITY; MOLECULAR STRUCTURE; MUSCLE; RNA; TISSUE;

CDNA CLONING; DNASE X; GLYCOSYLATION; TRANSLATION INITIATION;

PROTEINS;

COMPLEMENTARY DNA; DEOXYRIBONUCLEASE; MESSENGER RNA;

AMINO ACID SEQUENCE; AMINO TERMINAL SEQUENCE; ARTICLE; CARBOXY TERMINAL SEQUENCE; CODON; CONTROLLED STUDY; ENDOPLASMIC RETICULUM; FEMALE; GENE EXPRESSION; GLYCOSYLATION; HUMAN; HUMAN CELL; HYDROPHOBICITY; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN DOMAIN; PROTEIN EXPRESSION; RNA TRANSLATION;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; CATTLE; CODON, INITIATOR; CONSENSUS SEQUENCE; DEOXYRIBONUCLEASES; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, ENZYMOLOGIC; HELA CELLS; HUMANS; MICE; MOLECULAR SEQUENCE DATA; PEPTIDE CHAIN INITIATION, TRANSLATIONAL; PROTEIN BIOSYNTHESIS; RNA, MESSENGER; SEQUENCE HOMOLOGY, AMINO ACID; SWINE;

BOVINAE; MAMMALIA; SUIDAE;

EID: 29644434023     PISSN: 02646021     EISSN: None     Source Type: Journal    
DOI: 10.1042/BJ20051114     Document Type: Article

References (32)

1. Moore, S. (1981) Pancreatic DNase. In The enzymes (Boyer, P. D., ed.), pp. 281-296, Academic Press, New York
2. 2+ in the activity of bovine pancreatic deoxyribonuclease. J. Biol. Chem. 250, 1981-1986
3. Campbell, V. W. and Jackson, D. A. (1980) The effect of divalent cations on the mode of action of DNase I. The initial reaction products produced from covalently closed circular DNA. J. Biol. Chem. 255, 3726-3735
4. Pergolizzi, R., Appierto, V., Bosetti, A., DeBellis, G. L., Rovida, E. and Biunno, I. (1996) Cloning of a gene encoding a DNase I-like endonuclease in the human Xq28 region. Gene 168, 267-270
5. Parrish, J. E., Ciccodicola, A., Wehhert, M., Cox, G. F., Chen, E. and Nelson, D. L. (1995) A muscle-specific DNase I-like gene in human Xq28. Hum. Mol. Genet. 4, 1557-1564
6. Coy, J. F., Velhagen, I., Himmele, R., Delius, H., Poustka, A. and Zentgraf, H. (1996) Isolation, differential splicing and protein expression of a DNase on the human X chromosome. Cell Death Differ. 3, 199-206
7. Shiokawa, D. and Tanuma, S. (1998) Molecular cloning and expression of a cDNA encoding an apoptotic endonuclease DNase γ. Biochem. J. 332, 713-720
8. Rodriguez, A. M., Rodin, D., Nomura, H., Morton, C. C., Weremowicz, S. and Schneider, M. C. (1997) Identification, localization, and expression of two novel human genes similar to deoxyribonuclease I. Genomics 42, 507-513
9. Shiokawa, D. and Tanuma, S. (2001) Characterization of human DNase I family endonucleases and activation of DNase γ during apoptosis. Biochemistry 40, 143-152
10. Los, M., Neubuser, D., Coy, J. F., Mozoluk, M., Poustka, A. and Schulze-Osthoff, K. (2000) Functional characterization of DNase X, a novel endonuclease expressed in muscle cells. Biochemistry 39, 7365-7373
11. Shiokawa, D., Kobayashi, T. and Tanuma, S. (2002) Involvement of DNase γ in apoptosis associated with myogenic differentiation of C2C12 cells. J. Biol. Chem. 277, 31031-31037
12. Kozak, M. (1992) A consideration of alternative models for the initiation of translation in eukaryotes. Crit. Rev. Biochem. Mol. Biol. 27, 385-402
13. Kozak, M. (1989) The scanning model for translation: an update. J. Cell Biol. 108, 229-241
14. Peabody, D. S. (1989) Translation initiation at non-AUG triplets in mammalian cells. J. Biol. Chem. 264, 5031-5035
15. Schwab, S. R., Li, K. C., Kang, C. and Shastri, N. (2003) Constitutive display of cryptic translation products by MHC class I molecules. Science (Washington, DC) 301, 1367-1371
16. Schwab, S. R., Shugart, J. A., Horng, T., Malarkannan, S. and Shastri, N. (2004) Unanticipated antigens: translation initiation at CUG with leucine. PLoS Biol. 2, 1774-1784
17. Martonosi, A. N. and Pikula, S. (2003) The network of calcium regulation in muscle. Acta Biochim. Pol. 50, 1-30
18. 2+-ATPase of the sarcoplasmic reticulum. Annu. Rev. Biochem. 73, 269-292
19. Lahm, A. and Suck, D. (1991) DNase I-induced DNA conformation. 2 Å structure of a DNase I-octamer complex. J. Mol. Biol. 222, 645-667
20. Jones, S. J., Worrall, A. F. and Connolly, B. A. (1996) Site-directed mutagenesis of the catalytic residues of bovine pancreatic deoxyribonuclease I. J. Mol. Biol. 264, 1154-1163
21. Evans, S. J., Shipstone, E. J., Maughan, W. N. and Connolly, B. A. (1999) Site-directed mutagenesis of phosphate-contacting amino acids of bovine pancreatic deoxyribonuclease I. Biochemistry 38, 3902-3909
22. Hann, S. R., King, M. W., Bentley, D. L., Anderson, C. W. and Eisenman, R. N. (1988) A non-AUG translational initiation in c-myc exon 1 generates an N-terminally distinct protein whose synthesis is disrupted in Burkitt's lymphomas. Cell 52, 185-195
23. Peabody, D. S. (1987) Translation initiation at an ACG triplet in mammalian cells. J. Biol. Chem. 262, 11847-11851
24. Boeck, R. and Kolakofsky, D. (1994) Positions +5 and +6 can be major determinants of the efficiency of non-AUG initiation codons for protein synthesis. EMBO J. 13, 3608-3617
25. Grunert, S. and Jackson, R. J. (1994) The immediate downstream codon strongly influences the efficiency of utilization of eukaryotic translation initiation codons. EMBO J. 13, 3618-3630
26. Corcelette, S., Masse, T. and Madjar, J. J. (2000) Initiation of translation by non-AUG codons in human T-cell lymphotropic virus type I mRNA encoding both Rex and Tax regulatory proteins. Nucleic Acids Res. 28, 1625-1634
27. Lock, P., Ralph, S., Stanley, E., Boulet, I., Ramsay, R. and Dunn, A. R. (1991) Two isoforms of murine hck, generated by utilization of alternative translational initiation codons, exhibit different patterns of subcellular localization. Mol. Cell. Biol. 11, 4363-4370
28. Acland, P., Dixon, M., Peters, G. and Dickson, C. (1990) Subcellular fate of the int-2 oncoprotein is determined by choice of initiation codon. Nature (London) 343, 662-665
29. Bugler, B., Amalric, F. and Prats, H. (1991) Alternative initiation of translation determines cytoplasmic or nuclear localization of basic fibroblast growth factor. Mol. Cell. Biol. 11, 573-577
30. Packham, G., Brimmell, M. and Cleveland, J. L. (1997) Mammalian cells express two differently localized Bag-1 isoforms generated by alternative translation initiation. Biochem. J. 328, 807-813
31. Hann, S. R., Sloan-Brown, K. and Spotts, G. D. (1992) Translational activation of the non-AUG-initiated c-myc 1 protein at high cell densities due to methionine deprivation. Genes Dev. 6, 1229-1240
32. Kevil, C., Carter, P., Hu, B. and DeBenedetti, A. (1995) Translational enhancement of FGF-2 by eIF-4 factors, and alternate utilization of CUG and AUG codons for translation initiation. Oncogene 11, 2339-2348