-
1
-
-
0035865322
-
A map of genome sequence information containing 1.42 million single nucleotide polymorphisms
-
Sachidanandam R, Weissman D, Schmidt SC, Kakol JM, Stein LD, Marth G, Sherry S: A map of genome sequence information containing 1.42 million single nucleotide polymorphisms. Nature 2001, 409:187-196.
-
(2001)
Nature
, vol.409
, pp. 187-196
-
-
Sachidanandam, R.1
Weissman, D.2
Schmidt, S.C.3
Kakol, J.M.4
Stein, L.D.5
Marth, G.6
Sherry, S.7
-
2
-
-
0036137130
-
Linkage disequilibrium and mapping of complex human traits
-
Weiss KM, Clark AG: Linkage disequilibrium and mapping of complex human traits. Trends in Genetics 2002, 18:19-24.
-
(2002)
Trends in Genetics
, vol.18
, pp. 19-24
-
-
Weiss, K.M.1
Clark, A.G.2
-
3
-
-
0035941029
-
Blocks of Limited Haplotype Diversity Revealed by High-Resolution Scanning of Human Chromosome 21
-
Patil N, Berno AJ, Hinds DA, Barrett WA, Doshi JM, Hacker CR, Kautzer CR, Lee DH, Marjoribanks C, McDonough DP, Nguyen BTN, Norris MC, Sheehan JB, Shen N, Stern D, Stokowski RP, Thomas DJ, Trulson MO, Vyas KR, Frazer KA, Fodor SPA, Cox DR: Blocks of Limited Haplotype Diversity Revealed by High-Resolution Scanning of Human Chromosome 21. Science 2003, 294:1719-1723.
-
(2003)
Science
, vol.294
, pp. 1719-1723
-
-
Patil, N.1
Berno, A.J.2
Hinds, D.A.3
Barrett, W.A.4
Doshi, J.M.5
Hacker, C.R.6
Kautzer, C.R.7
Lee, D.H.8
Marjoribanks, C.9
McDonough, D.P.10
Nguyen, B.T.N.11
Norris, M.C.12
Sheehan, J.B.13
Shen, N.14
Stern, D.15
Stokowski, R.P.16
Thomas, D.J.17
Trulson, M.O.18
Vyas, K.R.19
Frazer, K.A.20
Fodor, S.P.A.21
Cox, D.R.22
more..
-
4
-
-
0034767636
-
Complex High-Resolution Linkage Disequilibrium and Haplotype Patterns of Single-Nucleotide Polymorphisms in 2.5 Mb of Sequence on Human Chromosome 21
-
Olivier M, Bustos VI, Levy MR, Smick GA, Moreno I, Bushard JM, Almendras AA, Sheppard K, Zierten DL, Aggarwal A, Carlson CS, Foster BD, Vo N, Kelly L, Liu X, Cox DR: Complex High-Resolution Linkage Disequilibrium and Haplotype Patterns of Single-Nucleotide Polymorphisms in 2.5 Mb of Sequence on Human Chromosome 21. Genomics 2001, 78:64-72.
-
(2001)
Genomics
, vol.78
, pp. 64-72
-
-
Olivier, M.1
Bustos, V.I.2
Levy, M.R.3
Smick, G.A.4
Moreno, I.5
Bushard, J.M.6
Almendras, A.A.7
Sheppard, K.8
Zierten, D.L.9
Aggarwal, A.10
Carlson, C.S.11
Foster, B.D.12
Vo, N.13
Kelly, L.14
Liu, X.15
Cox, D.R.16
-
5
-
-
0034791035
-
High-resolution haplotype structure in the human genome
-
Daly MJ, Rioux JD, Schaffner SF, Hudson TJ, Lander ES: High-resolution haplotype structure in the human genome. Nature Genetics 2001, 29:229-232.
-
(2001)
Nature Genetics
, vol.29
, pp. 229-232
-
-
Daly, M.J.1
Rioux, J.D.2
Schaffner, S.F.3
Hudson, T.J.4
Lander, E.S.5
-
6
-
-
18444369013
-
The Structure of Haplotype Blocks in the Human Genome
-
Gabriel SB, Schaffner SF, Nguyen H, Moore JM, Roy J, Blumenstiel B, Higgins J, DeFelice M, Lochner A, Faggart M, Liu-Cordero SN, Rotimi C, Adeyemo A, Cooper R, Ward R, Lander ES, Daly MJ, Altshuler D: The Structure of Haplotype Blocks in the Human Genome. Science 2003, 296:2225-2229.
-
(2003)
Science
, vol.296
, pp. 2225-2229
-
-
Gabriel, S.B.1
Schaffner, S.F.2
Nguyen, H.3
Moore, J.M.4
Roy, J.5
Blumenstiel, B.6
Higgins, J.7
DeFelice, M.8
Lochner, A.9
Faggart, M.10
Liu-Cordero, S.N.11
Rotimi, C.12
Adeyemo, A.13
Cooper, R.14
Ward, R.15
Lander, E.S.16
Daly, M.J.17
Altshuler, D.18
-
7
-
-
13144306071
-
Genome-wide Association Studies for Common Diseases and Complex Traits
-
Hirschorn JN, Daly MJ: Genome-wide Association Studies for Common Diseases and Complex Traits. Nature Reviews Genetics 2005, 6:95-108.
-
(2005)
Nature Reviews Genetics
, vol.6
, pp. 95-108
-
-
Hirschorn, J.N.1
Daly, M.J.2
-
8
-
-
0037188541
-
A dynamic programming algorithm for haplotype block partitioning
-
Zhang K, Deng M, Chen T, Waterman MS, Sun F: A dynamic programming algorithm for haplotype block partitioning. PNAS 2002, 99:7335-7339.
-
(2002)
PNAS
, vol.99
, pp. 7335-7339
-
-
Zhang, K.1
Deng, M.2
Chen, T.3
Waterman, M.S.4
Sun, F.5
-
9
-
-
0041664867
-
Finding Haplotype Block Boundaries by Using the Minimum-Description-Length Principle
-
Anderson EC, Novembre J: Finding Haplotype Block Boundaries by Using the Minimum-Description-Length Principle. American Journal of Human Genetics 2003, 73:336-354.
-
(2003)
American Journal of Human Genetics
, vol.73
, pp. 336-354
-
-
Anderson, E.C.1
Novembre, J.2
-
10
-
-
12744253764
-
HapBlock: Haplotype block partitioning and tag SNP selection software using a set of dynamic programming algorithms
-
Zhang K, Qin Z, Chen T, Liu JS, Waterman MS, Sun F: HapBlock: haplotype block partitioning and tag SNP selection software using a set of dynamic programming algorithms. Bioinformatics 2005, 21:131-134.
-
(2005)
Bioinformatics
, vol.21
, pp. 131-134
-
-
Zhang, K.1
Qin, Z.2
Chen, T.3
Liu, J.S.4
Waterman, M.S.5
Sun, F.6
-
11
-
-
0036468808
-
Linkage disequilibrium: What history has to tell us
-
Nordborg M, Tavare S: Linkage disequilibrium: What history has to tell us. Trends in Genetics 2002, 18:83-90.
-
(2002)
Trends in Genetics
, vol.18
, pp. 83-90
-
-
Nordborg, M.1
Tavare, S.2
-
12
-
-
13444269543
-
Haploview: Analysis and visualization of LD and haplotype maps
-
Barrett JC, Fry B, Maller J, Daly MJ: Haploview: analysis and visualization of LD and haplotype maps. Bioinformatics 2005, 21:263-265.
-
(2005)
Bioinformatics
, vol.21
, pp. 263-265
-
-
Barrett, J.C.1
Fry, B.2
Maller, J.3
Daly, M.J.4
-
14
-
-
1042280308
-
Defining haplotype blocks and tag single-nucleotide polymorphisms in the human genome
-
Schulze TG, Zhang K, Chen YS, Akula N, Sun F, McMahon FJ: Defining haplotype blocks and tag single-nucleotide polymorphisms in the human genome. Human Molecular Genetics 2004, 13:335-342.
-
(2004)
Human Molecular Genetics
, vol.13
, pp. 335-342
-
-
Schulze, T.G.1
Zhang, K.2
Chen, Y.S.3
Akula, N.4
Sun, F.5
McMahon, F.J.6
-
15
-
-
12144290432
-
The impact of SNP density on fine-scale patterns of linkage disequilibrium
-
Ke X, Hunt S, Tapper W, Lawrence R, Stavrides G, Ghori J, Whittaker P, Collins A, Morris AP, Bentley D, Cardon LR, Deloukas P: The impact of SNP density on fine-scale patterns of linkage disequilibrium. Human Molecular Genetics 2004, 13:577-588.
-
(2004)
Human Molecular Genetics
, vol.13
, pp. 577-588
-
-
Ke, X.1
Hunt, S.2
Tapper, W.3
Lawrence, R.4
Stavrides, G.5
Ghori, J.6
Whittaker, P.7
Collins, A.8
Morris, A.P.9
Bentley, D.10
Cardon, L.R.11
Deloukas, P.12
-
16
-
-
0036844238
-
Distribution of Recombination Crossovers and the Origin of Haplotype Blocks: The Interplay of Population History, Recombination, and Mutation
-
Wang N, Akey JM, Zhang K, Chakraborty R, Jin L: Distribution of Recombination Crossovers and the Origin of Haplotype Blocks: The Interplay of Population History, Recombination, and Mutation. American Journal of Human Genetics 2002, 71:1227-1234.
-
(2002)
American Journal of Human Genetics
, vol.71
, pp. 1227-1234
-
-
Wang, N.1
Akey, J.M.2
Zhang, K.3
Chakraborty, R.4
Jin, L.5
-
17
-
-
0037370466
-
Chromosome-wide distribution of haplotype blocks and the role of recombination hot spots
-
Phillips M, Lawrence R, Sachidanandam R, Morris A, Balding D, Donaldson M, Studebaker J, Ankener W, Alfisi S, Kuo FS, Camisa A, Pazorov V, Scott K, Carey B, Faith J, Katari G, Bhatti H, Cyr J, Derohannessian V, Elosua C, Forman A, Grecco N, Hock C, Kuebler J, Lathrop J, Mockler M, Nachtman E, Restine S, Varde S, Hozza M, Gelfand C, Broxholme J, Abecasis G, Boyce-Jacino M, Cardon L: Chromosome-wide distribution of haplotype blocks and the role of recombination hot spots. Nature Genetics 2003, 33:382-387.
-
(2003)
Nature Genetics
, vol.33
, pp. 382-387
-
-
Phillips, M.1
Lawrence, R.2
Sachidanandam, R.3
Morris, A.4
Balding, D.5
Donaldson, M.6
Studebaker, J.7
Ankener, W.8
Alfisi, S.9
Kuo, F.S.10
Camisa, A.11
Pazorov, V.12
Scott, K.13
Carey, B.14
Faith, J.15
Katari, G.16
Bhatti, H.17
Cyr, J.18
Derohannessian, V.19
Elosua, C.20
Forman, A.21
Grecco, N.22
Hock, C.23
Kuebler, J.24
Lathrop, J.25
Mockler, M.26
Nachtman, E.27
Restine, S.28
Varde, S.29
Hozza, M.30
Gelfand, C.31
Broxholme, J.32
Abecasis, G.33
Boyce-Jacino, M.34
Cardon, L.35
more..
-
18
-
-
0344091561
-
Additional SNPs and linkage-disequilibrium analyses are necessary for whole-genome association studies in humans
-
Carlson CS, Eberle MA, Rieder MJ, Smith JD, Kruglyak L, Nickerson DA: Additional SNPs and linkage-disequilibrium analyses are necessary for whole-genome association studies in humans. Nature Genetics 2003, 33:518-521.
-
(2003)
Nature Genetics
, vol.33
, pp. 518-521
-
-
Carlson, C.S.1
Eberle, M.A.2
Rieder, M.J.3
Smith, J.D.4
Kruglyak, L.5
Nickerson, D.A.6
-
19
-
-
7444260846
-
The ENCODE (ENCyclopedia Of DNA Elements) Project
-
Consortium TEP: The ENCODE (ENCyclopedia Of DNA Elements) Project. Science 2003, 306:636-640.
-
(2003)
Science
, vol.306
, pp. 636-640
-
-
Consortium, T.E.P.1
-
20
-
-
79959503826
-
The International HapMap Project
-
International HapMap Consortium T
-
International HapMap Consortium T: The International HapMap Project. Nature 2003, 426:789-796.
-
(2003)
Nature
, vol.426
, pp. 789-796
-
-
-
21
-
-
0037422542
-
Sequence variations in the public genome data reflect a bottlenecked population history
-
Marth G, Schuler G, Yeh R, Davenport R, Agarwala R, Church D, Wheelan S, Baker J, Ward M, Kholodov M, Phan L, Czabarka E, Murvai J, Cutler D, Wooding S, Rogers A, Chakravarti A, Harpending HC, Kwok PY, Sherry ST: Sequence variations in the public genome data reflect a bottlenecked population history. PNAS 2003, 100:376-381.
-
(2003)
PNAS
, vol.100
, pp. 376-381
-
-
Marth, G.1
Schuler, G.2
Yeh, R.3
Davenport, R.4
Agarwala, R.5
Church, D.6
Wheelan, S.7
Baker, J.8
Ward, M.9
Kholodov, M.10
Phan, L.11
Czabarka, E.12
Murvai, J.13
Cutler, D.14
Wooding, S.15
Rogers, A.16
Chakravarti, A.17
Harpending, H.C.18
Kwok, P.Y.19
Sherry, S.T.20
more..
-
22
-
-
0042387813
-
Assessing the Performance of the Haplotype Block Model of Linkage Disequilibrium
-
Pritchard JK, Wall J: Assessing the Performance of the Haplotype Block Model of Linkage Disequilibrium. American Journal of Human Genetics 2003, 73:502-515.
-
(2003)
American Journal of Human Genetics
, vol.73
, pp. 502-515
-
-
Pritchard, J.K.1
Wall, J.2
-
23
-
-
0038039701
-
Haplotypes and Informative SNP Selection Algorithms: Don't Block Out Information
-
Bafna V, Halldorsson BV, Schwartz R, Clark AG, Istrail S: Haplotypes and Informative SNP Selection Algorithms: Don't Block Out Information. RECOMB 2003, : 19-27.
-
(2003)
RECOMB
, pp. 19-27
-
-
Bafna, V.1
Halldorsson, B.V.2
Schwartz, R.3
Clark, A.G.4
Istrail, S.5
-
24
-
-
0037227781
-
Robustness of Inference of Haplotype Block Structure
-
Schwartz R, Halldorsson BV, Bafna V, Clark AG, Istrail S: Robustness of Inference of Haplotype Block Structure. Journal of Computational Biology 2003, 10:13-19.
-
(2003)
Journal of Computational Biology
, vol.10
, pp. 13-19
-
-
Schwartz, R.1
Halldorsson, B.V.2
Bafna, V.3
Clark, A.G.4
Istrail, S.5
-
25
-
-
4444326345
-
Optimal Haplotype Block-Free Selection of Tagging SNPs for Genome-Wide Association Studies
-
Halldorsson BV, Bafna V, Lippert R, Schwartz R, Vega FMDL, Clark AG, Istrail S: Optimal Haplotype Block-Free Selection of Tagging SNPs for Genome-Wide Association Studies. Genome Research 2004, 14:1633-1640.
-
(2004)
Genome Research
, vol.14
, pp. 1633-1640
-
-
Halldorsson, B.V.1
Bafna, V.2
Lippert, R.3
Schwartz, R.4
Vega, F.M.D.L.5
Clark, A.G.6
Istrail, S.7
-
26
-
-
0346373654
-
Selecting a Maximally Informative Set of Single-Nucleotide Polymorphisms for Association Analyses Using Linkage Disequilibrium
-
Carlson CS, Eberle MA, Rieder MJ, Yi Q, Kruglyak L, Nickerson DA: Selecting a Maximally Informative Set of Single-Nucleotide Polymorphisms for Association Analyses Using Linkage Disequilibrium. The American Journal of Human Genetics 2004, 74:106-120.
-
(2004)
The American Journal of Human Genetics
, vol.74
, pp. 106-120
-
-
Carlson, C.S.1
Eberle, M.A.2
Rieder, M.J.3
Yi, Q.4
Kruglyak, L.5
Nickerson, D.A.6
-
28
-
-
10344253282
-
The Effect of Haplotype-Block Definitions on Inference of Haplotype-Block Structure and htSNPs Selection
-
Ding K, Zhou K, Zhang J, Knight J, Zhang X, Shen Y: The Effect of Haplotype-Block Definitions on Inference of Haplotype-Block Structure and htSNPs Selection. Molecular Biology and Evolution 2005, 22:148-159.
-
(2005)
Molecular Biology and Evolution
, vol.22
, pp. 148-159
-
-
Ding, K.1
Zhou, K.2
Zhang, J.3
Knight, J.4
Zhang, X.5
Shen, Y.6
-
29
-
-
0036079158
-
The Human Genome Browser at UCSC
-
Kent WJ, Sugnet CW, Furey TS, Roskin KM, Pringle TH, Zahler AM, Haussler D: The Human Genome Browser at UCSC. Genome Research 2002, 12:996-1006.
-
(2002)
Genome Research
, vol.12
, pp. 996-1006
-
-
Kent, W.J.1
Sugnet, C.W.2
Furey, T.S.3
Roskin, K.M.4
Pringle, T.H.5
Zahler, A.M.6
Haussler, D.7
-
30
-
-
0347755531
-
The UCSC Table Browser data retrieval tool
-
Karolchik D, Hinrichs AS, Furey TS, Roskin KM, Sugnet CW, Haussler D, Kent WJ: The UCSC Table Browser data retrieval tool. Nucleic Acids Research 2004, 32(Suppl 1):D493-D496.
-
(2004)
Nucleic Acids Research
, vol.32
, Issue.SUPPL. 1
-
-
Karolchik, D.1
Hinrichs, A.S.2
Furey, T.S.3
Roskin, K.M.4
Sugnet, C.W.5
Haussler, D.6
Kent, W.J.7
|