메뉴 건너뛰기




Volumn 80, Issue 5, 2005, Pages 367-375

Preliminary genetic characterization of two lineages of black rats (Rattus rattus sensu lato) in Japan, with evidence for introgression at several localities

Author keywords

Black rats; Cytochrome b; IRBP; Karyotype; Molecular phylogeny

Indexed keywords

CYTOCHROME B; INTERPHOTORECEPTOR RETINOID BINDING PROTEIN;

EID: 29544434862     PISSN: 13417568     EISSN: 13417568     Source Type: Journal    
DOI: 10.1266/ggs.80.367     Document Type: Article
Times cited : (24)

References (37)
  • 1
    • 0142225925 scopus 로고    scopus 로고
    • Evolutionary biology of the genus Rattus: Profile of an archetypal rodent pest
    • Rats, mice and people: rodent biology and management, Australian Centre for International Agricultural Research (eds.: G. R. Singleton, L. A. Hinds, J. Krebs, and D. M. Spratt), Canberra
    • Aplin, K. P., Chesser, T., and ten Have, J. (2003) Evolutionary biology of the genus Rattus: profile of an archetypal rodent pest. In: ACIAR Technical Report 96. Rats, mice and people: rodent biology and management, Australian Centre for International Agricultural Research (eds.: G. R. Singleton, L. A. Hinds, J. Krebs, and D. M. Spratt), pp 487-498. Canberra
    • (2003) ACIAR Technical Report 96 , pp. 487-498
    • Aplin, K.P.1    Chesser, T.2    Ten Have, J.3
  • 2
    • 48649093992 scopus 로고    scopus 로고
    • Field methods for rodent studies in Asia and the Pacific
    • Australian Centre for International Agricultural Research, Canberra
    • Aplin, K. P., Brown, P. R., Jacob, J., Krebs, C., and Singleton, O. R. (2004) Field methods for rodent studies in Asia and the Pacific. In: ACIAR Monograph No. 100. Australian Centre for International Agricultural Research, Canberra.
    • (2004) ACIAR Monograph No. 100
    • Aplin, K.P.1    Brown, P.R.2    Jacob, J.3    Krebs, C.4    Singleton, O.R.5
  • 3
    • 0344961754 scopus 로고    scopus 로고
    • X-chromosomal localization of mammalian Y-linked genes in two XO species of the Ryukyu spiny rat
    • Arakawa, Y., Nishida-Umehara, C., Matsuda, Y., Sutou, S., and Suzuki, H. (2002) X-chromosomal localization of mammalian Y-linked genes in two XO species of the Ryukyu spiny rat. Cytogenet. Genome Res. 99, 303-309.
    • (2002) Cytogenet. Genome Res. , vol.99 , pp. 303-309
    • Arakawa, Y.1    Nishida-Umehara, C.2    Matsuda, Y.3    Sutou, S.4    Suzuki, H.5
  • 4
    • 0021020968 scopus 로고
    • Genetic differentiation among karyotypic forms of the black rat, Rattus rattus
    • Baverstock, P. R., Adams, M., Maxson, L. R., and Yosida, T. H. (1983) Genetic differentiation among karyotypic forms of the black rat, Rattus rattus. Genetics 105, 969-983.
    • (1983) Genetics , vol.105 , pp. 969-983
    • Baverstock, P.R.1    Adams, M.2    Maxson, L.R.3    Yosida, T.H.4
  • 5
    • 0024267679 scopus 로고
    • The isolation of a gene encoding interphotoreceptor retinoid-binding protein
    • Borst, D. E., and Nickerson, J. M. (1988) The isolation of a gene encoding interphotoreceptor retinoid-binding protein. Exp. Eye Res. 47, 825-838.
    • (1988) Exp. Eye Res. , vol.47 , pp. 825-838
    • Borst, D.E.1    Nickerson, J.M.2
  • 6
    • 0019348091 scopus 로고
    • Intra- and interspecific variation of the mitochondrial genome in Rattus norvegicus and Rattus rattus: Restriction enzyme analysis of variant mitochondrial DNA molecules and their evolutionary relationships
    • Brown, G. G., and Simpson, M. V. (1981) Intra- and interspecific variation of the mitochondrial genome in Rattus norvegicus and Rattus rattus: restriction enzyme analysis of variant mitochondrial DNA molecules and their evolutionary relationships. Genetics 97, 255-257.
    • (1981) Genetics , vol.97 , pp. 255-257
    • Brown, G.G.1    Simpson, M.V.2
  • 7
    • 0036185780 scopus 로고    scopus 로고
    • Black rat (Rattus rattus) genomic variability characterized by chromosome painting
    • Cavagna, P., Stone, G., and Stanyon, R. (2002) Black rat (Rattus rattus) genomic variability characterized by chromosome painting. Mammal. Genome 13, 157-163.
    • (2002) Mammal. Genome , vol.13 , pp. 157-163
    • Cavagna, P.1    Stone, G.2    Stanyon, R.3
  • 8
    • 0019797407 scopus 로고
    • Evolutionary trees from DNA sequences: A maximum likelihood approach
    • Felsenstein, J. (1981) Evolutionary trees from DNA sequences: a maximum likelihood approach. J. Mol. Evol. 17, 368-376.
    • (1981) J. Mol. Evol. , vol.17 , pp. 368-376
    • Felsenstein, J.1
  • 9
    • 0025214231 scopus 로고
    • Characterization and comparative structural features of the gene for human interstitial retinol-binding protein
    • Fong, S. L., Fong, W. B., Morris, T. A., Kedzie, K. M., and Bridges, C. D. B. (1990) Characterization and comparative structural features of the gene for human interstitial retinol-binding protein. J. Biol. Chem. 265, 3648-3653.
    • (1990) J. Biol. Chem. , vol.265 , pp. 3648-3653
    • Fong, S.L.1    Fong, W.B.2    Morris, T.A.3    Kedzie, K.M.4    Bridges, C.D.B.5
  • 11
    • 0002019120 scopus 로고    scopus 로고
    • Phylogenetic studies on didelphid marsupials I. Introduction and preliminary results from nuclear IRBP gene sequences
    • Jansa, S. A., and Voss, R. S. (2000) Phylogenetic studies on didelphid marsupials I. Introduction and preliminary results from nuclear IRBP gene sequences. J. Mammal. Evol. 7, 43-77.
    • (2000) J. Mammal. Evol. , vol.7 , pp. 43-77
    • Jansa, S.A.1    Voss, R.S.2
  • 12
    • 0002371534 scopus 로고
    • Quaternary Rodent Faunas in the Japanese Islands (Part 2)
    • Kawamura, Y. (1989) Quaternary Rodent Faunas in the Japanese Islands (Part 2). Mem. Fac. Sci. Kyoto Univ. Ser. Geol. Min. 54, 1-235.
    • (1989) Mem. Fac. Sci. Kyoto Univ. Ser. Geol. Min. , vol.54 , pp. 1-235
    • Kawamura, Y.1
  • 13
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura, M. (1980) A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16, 111-120.
    • (1980) J. Mol. Evol. , vol.16 , pp. 111-120
    • Kimura, M.1
  • 16
    • 0015864937 scopus 로고
    • Studies on rodent chromosomes: Co-existence of Rattus rattus with 38 and 42 chromosomes in South Western India
    • Lakhotia, S. C., Rao, S. R., and Jhanwar, S. C. (1973) Studies on rodent chromosomes: Co-existence of Rattus rattus with 38 and 42 chromosomes in South Western India. Cytologia 38, 403-410.
    • (1973) Cytologia , vol.38 , pp. 403-410
    • Lakhotia, S.C.1    Rao, S.R.2    Jhanwar, S.C.3
  • 18
    • 0016795190 scopus 로고
    • Geographical distribution of twelve transferrin alleles in black rats of Asia and Oceania
    • Moriwaki, K., Kato, H., Imai, H., Tsuchiya, K., and Yosida, T. H. (1975) Geographical distribution of twelve transferrin alleles in black rats of Asia and Oceania. Genetics 79, 295-304.
    • (1975) Genetics , vol.79 , pp. 295-304
    • Moriwaki, K.1    Kato, H.2    Imai, H.3    Tsuchiya, K.4    Yosida, T.H.5
  • 19
    • 0002542735 scopus 로고
    • Family Muridae
    • eds.: D. E. Wilson, and D. M. Reeder, Smithsonian Institute Press, Washington and London
    • Musser, G. G., and Carleton, M. D. (1993) Family Muridae. In: Mammal Species of the World, second edition (eds.: D. E. Wilson, and D. M. Reeder), pp 501-806. Smithsonian Institute Press, Washington and London.
    • (1993) Mammal Species of the World, Second Edition , pp. 501-806
    • Musser, G.G.1    Carleton, M.D.2
  • 20
    • 30344481292 scopus 로고    scopus 로고
    • Family Muridae
    • (eds.: D. E. Wilson, and D. M. Reeder), Smithsonian Institute Press, Washington and London, (in press)
    • Musser, G, G., and Carleton, M. D. (2005) Family Muridae. In: Mammal Species of the World, third edition (eds.: D. E. Wilson, and D. M. Reeder), Smithsonian Institute Press, Washington and London, (in press)
    • (2005) Mammal Species of the World, Third Edition
    • Musser, G.G.1    Carleton, M.D.2
  • 21
    • 0031773680 scopus 로고    scopus 로고
    • Modeltest: Testing the model of DNA substitution
    • Posada, D., and Crandall, K. A. (1998) Modeltest: testing the model of DNA substitution. Bioinformatics 14, 817-818.
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 22
    • 85047691275 scopus 로고    scopus 로고
    • Molecular phylogeny of arctoids (Mammalia: Carnivora) with emphasis on phylogenetic and taxonomic positions of the ferret-badgers and skunks
    • Sato, J. J., Hosoda, T., Wolsan, M., Tsuchiya, K., and Suzuki, H. (2004) Molecular phylogeny of arctoids (Mammalia: Carnivora) with emphasis on phylogenetic and taxonomic positions of the ferret-badgers and skunks. Zool. Sci. 21, 111-118.
    • (2004) Zool. Sci. , vol.21 , pp. 111-118
    • Sato, J.J.1    Hosoda, T.2    Wolsan, M.3    Tsuchiya, K.4    Suzuki, H.5
  • 23
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N., and Nei, M. (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4, 406-125.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-1125
    • Saitou, N.1    Nei, M.2
  • 24
    • 0034119769 scopus 로고    scopus 로고
    • A phylogenetic view on species radiation in Apodemus inferred from variation of nuclear and mitochondrial genes
    • Serizawa, K., Suzuki, H., and Tsuchiya, K. (2000) A phylogenetic view on species radiation in Apodemus inferred from variation of nuclear and mitochondrial genes. Biochem. Genet. 38, 27-40.
    • (2000) Biochem. Genet. , vol.38 , pp. 27-40
    • Serizawa, K.1    Suzuki, H.2    Tsuchiya, K.3
  • 25
    • 0031459895 scopus 로고    scopus 로고
    • The interphotoreceptor retinoid binding protein gene in therian mammals: Implications for higher level relationships and evidence for loss of function in the marsupial mole
    • USA
    • Springer, M. S., Burk, A., Kavanagh, J. R., Waddell, V. G., and Stanhope, M. J. (1997) The interphotoreceptor retinoid binding protein gene in therian mammals: implications for higher level relationships and evidence for loss of function in the marsupial mole. Proc. Natl. Acad. Sci. USA 94, 13754-13759.
    • (1997) Proc. Natl. Acad. Sci. , vol.94 , pp. 13754-13759
    • Springer, M.S.1    Burk, A.2    Kavanagh, J.R.3    Waddell, V.G.4    Stanhope, M.J.5
  • 26
    • 0033085041 scopus 로고    scopus 로고
    • Additional support for Afrotheria and Paenungulata, the performance of mitochondrial versus nuclear genes, and the impact of data partitions with heterogeneous base composition
    • Springer, M. S., Amrine, H. M., Burk, A., and Stanhope, M. J. (1999) Additional support for Afrotheria and Paenungulata, the performance of mitochondrial versus nuclear genes, and the impact of data partitions with heterogeneous base composition. Syst. Biol. 48, 65-75.
    • (1999) Syst. Biol. , vol.48 , pp. 65-75
    • Springer, M.S.1    Amrine, H.M.2    Burk, A.3    Stanhope, M.J.4
  • 28
    • 0029785077 scopus 로고    scopus 로고
    • Mammalian evolution and the interphotoreceptor retinoid binding protein (IRBP) gene: Convincing evidence for several superordinal clades
    • Stanhope, M. J., Smith, M. R., Waddell, V. G., Porter, C. A., Shivji, M. S., and Goodman, M. (1996) Mammalian evolution and the interphotoreceptor retinoid binding protein (IRBP) gene: convincing evidence for several superordinal clades. J. Mol. Evol. 43, 83-92.
    • (1996) J. Mol. Evol. , vol.43 , pp. 83-92
    • Stanhope, M.J.1    Smith, M.R.2    Waddell, V.G.3    Porter, C.A.4    Shivji, M.S.5    Goodman, M.6
  • 29
    • 7444256084 scopus 로고    scopus 로고
    • Temporal, spatial, and ecological modes of evolution of Eurasian Mus based on mitochondrial and nuclear gene sequences
    • Suzuki, H., Shimada, T., Terashima, M., Tsuchiya, K., and Aplin, K. (2004) Temporal, spatial, and ecological modes of evolution of Eurasian Mus based on mitochondrial and nuclear gene sequences. Mol. Phylogenet. Evol. 33, 626-646.
    • (2004) Mol. Phylogenet. Evol. , vol.33 , pp. 626-646
    • Suzuki, H.1    Shimada, T.2    Terashima, M.3    Tsuchiya, K.4    Aplin, K.5
  • 30
    • 0034022497 scopus 로고    scopus 로고
    • A molecular phylogenetic framework for the Ryukyu endemic rodents Tokudaia osimensis and Diplothrix legata (Rodentia, Mammalia)
    • Suzuki, H., Tsuchiya, K., and Takezaki, N. (2000) A molecular phylogenetic framework for the Ryukyu endemic rodents Tokudaia osimensis and Diplothrix legata (Rodentia, Mammalia). Mol. Phylogenet. Evol. 15, 15-24.
    • (2000) Mol. Phylogenet. Evol. , vol.15 , pp. 15-24
    • Suzuki, H.1    Tsuchiya, K.2    Takezaki, N.3
  • 34
    • 0001140522 scopus 로고
    • Phylogeny construction
    • eds.: D. M. Hillis, and C. Moritz, Sinauer Associates
    • Swofford, D. L., and Olsen, G. J. (1990) Phylogeny construction. In: Molecular Systematics (eds.: D. M. Hillis, and C. Moritz), pp. 411-501. Sinauer Associates.
    • (1990) Molecular Systematics , pp. 411-501
    • Swofford, D.L.1    Olsen, G.J.2
  • 35
    • 0030819171 scopus 로고    scopus 로고
    • Determination of the evolutionary relationship in Rattus sensu lato (Rodentia:muridae) Using Ll (LINE) amplification events
    • Verneau, O., Catzeflis, F., and Furano, A. V. (1997) Determination of the evolutionary relationship in Rattus sensu lato (Rodentia:muridae) Using Ll (LINE) amplification events. J. Mol. Evol. 45, 424-436.
    • (1997) J. Mol. Evol. , vol.45 , pp. 424-436
    • Verneau, O.1    Catzeflis, F.2    Furano, A.V.3
  • 37
    • 0014989922 scopus 로고
    • Karyotypes and serum transferrin patterns of hybrids between Asian and Oceanian black rats, Rattus rattus
    • Yosida, T. H., Kato, H., Tsuchiya, K, and Moriwaki, K. (1971) Karyotypes and serum transferrin patterns of hybrids between Asian and Oceanian black rats, Rattus rattus. Chromosoma 34, 40-50.
    • (1971) Chromosoma , vol.34 , pp. 40-50
    • Yosida, T.H.1    Kato, H.2    Tsuchiya, K.3    Moriwaki, K.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.