-
1
-
-
0032484035
-
Capsid expansion follows the initiation of DNA packaging in bacteriophage T4
-
Jardine P.J., Coombs D.H. Capsid expansion follows the initiation of DNA packaging in bacteriophage T4. J. Mol. Biol. 284:1998;661-672
-
(1998)
J. Mol. Biol.
, vol.284
, pp. 661-672
-
-
Jardine, P.J.1
Coombs, D.H.2
-
2
-
-
0017319013
-
Capsid transformation during packaging of bacteriophage lambdaDNA
-
Hohn T., Wurtz M., Hohn B. Capsid transformation during packaging of bacteriophage lambdaDNA. Phil. Trans. Roy. Soc. London. 276:1976;51-61
-
(1976)
Phil. Trans. Roy. Soc. London
, vol.276
, pp. 51-61
-
-
Hohn, T.1
Wurtz, M.2
Hohn, B.3
-
3
-
-
0018932980
-
DNA packaging by the double-stranded DNA bacteriophages
-
Earnshaw W.C., Casjens S.R. DNA packaging by the double-stranded DNA bacteriophages. Cell. 21:1980;319-331
-
(1980)
Cell
, vol.21
, pp. 319-331
-
-
Earnshaw, W.C.1
Casjens, S.R.2
-
4
-
-
0034695668
-
Maturation dynamics of a viral capsid: Visualization of transitional intermediate states
-
Lata R., Conway J.F., Cheng N., Duda R.L., Hendrix R.W., Wikoff W.R., et al. Maturation dynamics of a viral capsid: visualization of transitional intermediate states. Cell. 100:2000;253-263
-
(2000)
Cell
, vol.100
, pp. 253-263
-
-
Lata, R.1
Conway, J.F.2
Cheng, N.3
Duda, R.L.4
Hendrix, R.W.5
Wikoff, W.R.6
-
5
-
-
0028847173
-
Proteolytic and conformational control of virus capsid maturation: The bacteriophage HK97 system
-
Conway J.F., Duda R.L., Cheng N., Hendrix R.W., Steven A.C. Proteolytic and conformational control of virus capsid maturation: the bacteriophage HK97 system. J Mol. Biol. 253:1995;86-99
-
(1995)
J Mol. Biol.
, vol.253
, pp. 86-99
-
-
Conway, J.F.1
Duda, R.L.2
Cheng, N.3
Hendrix, R.W.4
Steven, A.C.5
-
6
-
-
0035909370
-
The bacteriophage straight phi29 portal motor can package DNA against a large internal force
-
Smith D.E., Tans S.J., Smith S.B., Grimes S., Anderson D.L., Bustamante C. The bacteriophage straight phi29 portal motor can package DNA against a large internal force. Nature. 413:2001;748-752
-
(2001)
Nature
, vol.413
, pp. 748-752
-
-
Smith, D.E.1
Tans, S.J.2
Smith, S.B.3
Grimes, S.4
Anderson, D.L.5
Bustamante, C.6
-
7
-
-
0037340654
-
Forces and pressures in DNA packaging and release from viral capsids
-
Tzlil S., Kindt J.T., Gelbart W.M., Ben-Shaul A. Forces and pressures in DNA packaging and release from viral capsids. Biophys. J. 84:2003;1616-1627
-
(2003)
Biophys. J.
, vol.84
, pp. 1616-1627
-
-
Tzlil, S.1
Kindt, J.T.2
Gelbart, W.M.3
Ben-Shaul, A.4
-
9
-
-
0035957688
-
Virus maturation involving large subunit rotations and local refolding
-
Conway J.F., Wikoff W.R., Cheng N., Duda R.L., Hendrix R.W., Johnson J.E., Steven A.C. Virus maturation involving large subunit rotations and local refolding. Science. 292:2001;744-748
-
(2001)
Science
, vol.292
, pp. 744-748
-
-
Conway, J.F.1
Wikoff, W.R.2
Cheng, N.3
Duda, R.L.4
Hendrix, R.W.5
Johnson, J.E.6
Steven, A.C.7
-
10
-
-
0344010492
-
The refined structure of a protein catenane: The HK97 bacteriophage capsid at 3.44 Å resolution
-
Helgstrand C., Wikoff W.R., Duda R.L., Hendrix R.W., Johnson J.E., Liljas L. The refined structure of a protein catenane: the HK97 bacteriophage capsid at 3.44 Å resolution. J. Mol. Biol. 334:2003;885-899
-
(2003)
J. Mol. Biol.
, vol.334
, pp. 885-899
-
-
Helgstrand, C.1
Wikoff, W.R.2
Duda, R.L.3
Hendrix, R.W.4
Johnson, J.E.5
Liljas, L.6
-
11
-
-
0034703226
-
Topologically linked protein rings in the bacteriophage HK97 capsid
-
Wikoff W.R., Liljas L., Duda R.L., Tsuruta H., Hendrix R.W., Johnson J.E. Topologically linked protein rings in the bacteriophage HK97 capsid. Science. 289:2000;2129-2133
-
(2000)
Science
, vol.289
, pp. 2129-2133
-
-
Wikoff, W.R.1
Liljas, L.2
Duda, R.L.3
Tsuruta, H.4
Hendrix, R.W.5
Johnson, J.E.6
-
12
-
-
0031606857
-
Bacteriophage HK97 head assembly: A protein ballet
-
Hendrix R.W., Duda R.L. Bacteriophage HK97 head assembly: a protein ballet. Advan. Virus Res. 50:1998;235-288
-
(1998)
Advan. Virus Res.
, vol.50
, pp. 235-288
-
-
Hendrix, R.W.1
Duda, R.L.2
-
13
-
-
0028927348
-
Genetic basis of bacteriophage HK97 prohead assembly
-
Duda R.L., Martincic K., Hendrix R.W. Genetic basis of bacteriophage HK97 prohead assembly. J. Mol. Biol. 247:1995;636-647
-
(1995)
J. Mol. Biol.
, vol.247
, pp. 636-647
-
-
Duda, R.L.1
Martincic, K.2
Hendrix, R.W.3
-
15
-
-
0028969695
-
Structural transitions during bacteriophage HK97 head assembly
-
Duda R.L., Hempel J., Michel H., Shabanowitz J., Hunt D., Hendrix R.W. Structural transitions during bacteriophage HK97 head assembly. J. Mol. Biol. 247:1995;618-635
-
(1995)
J. Mol. Biol.
, vol.247
, pp. 618-635
-
-
Duda, R.L.1
Hempel, J.2
Michel, H.3
Shabanowitz, J.4
Hunt, D.5
Hendrix, R.W.6
-
16
-
-
0032504044
-
Protein chainmail: Catenated protein in viral capsids
-
Duda R.L. Protein chainmail: catenated protein in viral capsids. Cell. 94:1998;55-60
-
(1998)
Cell
, vol.94
, pp. 55-60
-
-
Duda, R.L.1
-
17
-
-
0037406441
-
Dynamics of herpes simplex virus capsid maturation visualized by time-lapse cryo-electron microscopy
-
Heymann J.B., Cheng N., Newcomb W.W., Trus B.L., Brown J.C., Steven A.C. Dynamics of herpes simplex virus capsid maturation visualized by time-lapse cryo-electron microscopy. Nature Struct. Biol. 10:2003;334-341
-
(2003)
Nature Struct. Biol.
, vol.10
, pp. 334-341
-
-
Heymann, J.B.1
Cheng, N.2
Newcomb, W.W.3
Trus, B.L.4
Brown, J.C.5
Steven, A.C.6
-
18
-
-
0030298322
-
Assembly of the herpes simplex virus capsid: Characterization of intermediates observed during cell-free capsid formation
-
Newcomb W.W., Homa F.L., Thomsen D.R., Booy F.P., Trus B.L., Steven A.C., et al. Assembly of the herpes simplex virus capsid: characterization of intermediates observed during cell-free capsid formation. J. Mol. Biol. 263:1996;432-446
-
(1996)
J. Mol. Biol.
, vol.263
, pp. 432-446
-
-
Newcomb, W.W.1
Homa, F.L.2
Thomsen, D.R.3
Booy, F.P.4
Trus, B.L.5
Steven, A.C.6
-
19
-
-
0029908793
-
The herpes simplex virus procapsid: Structure, conformational changes upon maturation, and roles of the triplex proteins VP19c and VP23 in assembly
-
Trus B.L., Booy F.P., Newcomb W.W., Brown J.C., Homa F.L., Thomsen D.R., Steven A.C. The herpes simplex virus procapsid: structure, conformational changes upon maturation, and roles of the triplex proteins VP19c and VP23 in assembly. J. Mol. Biol. 263:1996;447-462
-
(1996)
J. Mol. Biol.
, vol.263
, pp. 447-462
-
-
Trus, B.L.1
Booy, F.P.2
Newcomb, W.W.3
Brown, J.C.4
Homa, F.L.5
Thomsen, D.R.6
Steven, A.C.7
-
21
-
-
0016425031
-
Electron microscopic studies on assembly of herpes simplex virus upon removal of hydroxyurea block
-
Friedmann A., Coward J.E., Rosenkranz H.S., Morgan C. Electron microscopic studies on assembly of herpes simplex virus upon removal of hydroxyurea block. J. Gen. Virol. 26:1975;171-181
-
(1975)
J. Gen. Virol.
, vol.26
, pp. 171-181
-
-
Friedmann, A.1
Coward, J.E.2
Rosenkranz, H.S.3
Morgan, C.4
-
22
-
-
0025060289
-
Three-dimensional structures of maturable and abortive capsids of equine herpesvirus 1 from cryoelectron microscopy
-
Baker T.S., Newcomb W.W., Booy F.P., Brown J.C., Steven A.C. Three-dimensional structures of maturable and abortive capsids of equine herpesvirus 1 from cryoelectron microscopy. J. Virol. 64:1990;563-573
-
(1990)
J. Virol.
, vol.64
, pp. 563-573
-
-
Baker, T.S.1
Newcomb, W.W.2
Booy, F.P.3
Brown, J.C.4
Steven, A.C.5
-
23
-
-
0034737313
-
Visualization of the maturation transition in bacteriophage P22 by electron cryomicroscopy
-
Zhang Z., Greene B., Thuman-Commike P.A., Jakana J., Prevelige P.E. Jr, King J., Chiu W. Visualization of the maturation transition in bacteriophage P22 by electron cryomicroscopy. J. Mol. Biol. 297:2000;615-626
-
(2000)
J. Mol. Biol.
, vol.297
, pp. 615-626
-
-
Zhang, Z.1
Greene, B.2
Thuman-Commike, P.A.3
Jakana, J.4
Prevelige Jr., P.E.5
King, J.6
Chiu, W.7
-
24
-
-
0037313264
-
Coat protein fold and maturation transition of bacteriophage P22 seen at subnanometer resolutions
-
Jiang W., Li Z., Zhang Z., Baker M.L., Prevelige P.E. Jr, Chiu W. Coat protein fold and maturation transition of bacteriophage P22 seen at subnanometer resolutions. Nature Struct. Biol. 10:2003;131-135
-
(2003)
Nature Struct. Biol.
, vol.10
, pp. 131-135
-
-
Jiang, W.1
Li, Z.2
Zhang, Z.3
Baker, M.L.4
Prevelige Jr., P.E.5
Chiu, W.6
-
25
-
-
2942572925
-
Control of cross-linking by quaternary structure changes during bacteriophage HK97 maturation
-
in the press
-
Gan L., Conway J.F., Firek B.A., Cheng N., Hendrix R.W., Steven A.C., et al. Control of cross-linking by quaternary structure changes during bacteriophage HK97 maturation. Mol. Cell. 14:2004;. in the press
-
(2004)
Mol. Cell
, vol.14
-
-
Gan, L.1
Conway, J.F.2
Firek, B.A.3
Cheng, N.4
Hendrix, R.W.5
Steven, A.C.6
-
26
-
-
0027085892
-
Conformational changes of a viral capsid protein. Thermodynamic rationale for proteolytic regulation of bacteriophage T4 capsid expansion, co-operativity, and super-stabilization by soc binding
-
Steven A.C., Greenstone H.L., Booy F.P., Black L.W., Ross P.D. Conformational changes of a viral capsid protein. Thermodynamic rationale for proteolytic regulation of bacteriophage T4 capsid expansion, co-operativity, and super-stabilization by soc binding. J. Mol. Biol. 228:1992;870-884
-
(1992)
J. Mol. Biol.
, vol.228
, pp. 870-884
-
-
Steven, A.C.1
Greenstone, H.L.2
Booy, F.P.3
Black, L.W.4
Ross, P.D.5
-
27
-
-
0027366430
-
Structural transitions during maturation of bacteriophage lambda capsids
-
Dokland T., Murialdo H. Structural transitions during maturation of bacteriophage lambda capsids. J. Mol. Biol. 233:1993;682-694
-
(1993)
J. Mol. Biol.
, vol.233
, pp. 682-694
-
-
Dokland, T.1
Murialdo, H.2
-
28
-
-
0019005874
-
Determination of protein secondary structure in solution by vacuum ultraviolet circular dichroism
-
Brahms S., Brahms J. Determination of protein secondary structure in solution by vacuum ultraviolet circular dichroism. J. Mol. Biol. 138:1980;149-178
-
(1980)
J. Mol. Biol.
, vol.138
, pp. 149-178
-
-
Brahms, S.1
Brahms, J.2
-
29
-
-
0023785593
-
Secondary structure of proteins through circular dichroism spectroscopy
-
Johnson W.C. Jr. Secondary structure of proteins through circular dichroism spectroscopy. Annu. Rev. Biophys. Biophys. Chem. 17:1988;145-166
-
(1988)
Annu. Rev. Biophys. Biophys. Chem.
, vol.17
, pp. 145-166
-
-
Johnson Jr., W.C.1
-
30
-
-
0033562629
-
Analyzing protein circular dichroism spectra for accurate secondary structures
-
Johnson W.C. Analyzing protein circular dichroism spectra for accurate secondary structures. Proteins: Struct. Funct. Genet. 35:1999;307-312
-
(1999)
Proteins: Struct. Funct. Genet.
, vol.35
, pp. 307-312
-
-
Johnson, W.C.1
-
31
-
-
0028959773
-
Circular dichroism
-
Woody R.W. Circular dichroism. Methods Enzymol. 246:1995;34-71
-
(1995)
Methods Enzymol.
, vol.246
, pp. 34-71
-
-
Woody, R.W.1
-
32
-
-
0027068114
-
Quantitative analysis of cyclic beta-turn models
-
Perczel A., Fasman G.D. Quantitative analysis of cyclic beta-turn models. Protein Sci. 1:1992;378-395
-
(1992)
Protein Sci.
, vol.1
, pp. 378-395
-
-
Perczel, A.1
Fasman, G.D.2
-
33
-
-
0347693089
-
Crystallization and preliminary analysis of a dsDNA bacteriophage capsid intermediate: Prohead II of HK97
-
Wikoff W.R., Che Z., Duda R.L., Hendrix R.W., Johnson J.E. Crystallization and preliminary analysis of a dsDNA bacteriophage capsid intermediate: Prohead II of HK97. Acta Crystallog. sect. D, 59:2003;2060-2064
-
(2003)
Acta Crystallog. Sect. D
, vol.59
, pp. 2060-2064
-
-
Wikoff, W.R.1
Che, Z.2
Duda, R.L.3
Hendrix, R.W.4
Johnson, J.E.5
-
34
-
-
0027298784
-
Aromatic side-chain contribution to far-ultraviolet circular dichroism of helical peptides and its effect on measurement of helix propensities
-
Chakrabartty A., Kortemme T., Padmanabhan S., Baldwin R.L. Aromatic side-chain contribution to far-ultraviolet circular dichroism of helical peptides and its effect on measurement of helix propensities. Biochemistry. 32:1993;5560-5565
-
(1993)
Biochemistry
, vol.32
, pp. 5560-5565
-
-
Chakrabartty, A.1
Kortemme, T.2
Padmanabhan, S.3
Baldwin, R.L.4
-
35
-
-
0027959547
-
Assignment of the contribution of the tryptophan residues to the circular dichroism spectrum of human carbonic anhydrase II
-
Freskgard P.O., Martensson L.G., Jonasson P., Jonsson B.H., Carlsson U. Assignment of the contribution of the tryptophan residues to the circular dichroism spectrum of human carbonic anhydrase II. Biochemistry. 33:1994;14281-14288
-
(1994)
Biochemistry
, vol.33
, pp. 14281-14288
-
-
Freskgard, P.O.1
Martensson, L.G.2
Jonasson, P.3
Jonsson, B.H.4
Carlsson, U.5
-
36
-
-
0027527209
-
Circular dichroism studies of barnase and its mutants: Characterization of the contribution of aromatic side chains
-
Vuilleumier S., Sancho J., Loewenthal R., Fersht A.R. Circular dichroism studies of barnase and its mutants: characterization of the contribution of aromatic side chains. Biochemistry. 32:1993;10303-10313
-
(1993)
Biochemistry
, vol.32
, pp. 10303-10313
-
-
Vuilleumier, S.1
Sancho, J.2
Loewenthal, R.3
Fersht, A.R.4
-
37
-
-
0028102759
-
Contributions of tryptophan side chains to the far-ultraviolet circular dichroism of proteins
-
Woody R.W. Contributions of tryptophan side chains to the far-ultraviolet circular dichroism of proteins. Eur. Biophys. J. 23:1994;253-262
-
(1994)
Eur. Biophys. J.
, vol.23
, pp. 253-262
-
-
Woody, R.W.1
-
38
-
-
0015269849
-
The circular dichroism of aromatic polypeptides: Theoretical studies of poly-L-phenylalanine and some para-substituted derivatives
-
Woody R.W. The circular dichroism of aromatic polypeptides: theoretical studies of poly-L-phenylalanine and some para-substituted derivatives. Biopolymers. 11:1972;1149-1171
-
(1972)
Biopolymers
, vol.11
, pp. 1149-1171
-
-
Woody, R.W.1
-
39
-
-
2442544585
-
Domain structures and roles in bacteriophage HK97 capsid assembly and maturation
-
Benevides, J. M., Bondre, P., Duda, R. L., Hendrix, R. W., Thomas G. J., Jr. (2004). Domain structures and roles in bacteriophage HK97 capsid assembly and maturation. Biochemistry, 43, 5428-5436.
-
(2004)
Biochemistry
, vol.43
, pp. 5428-5436
-
-
Benevides, J.M.1
Bondre, P.2
Duda, R.L.3
Hendrix, R.W.4
Thomas Jr., G.J.5
-
40
-
-
0027447982
-
Subunit conformational changes accompanying bacteriophage P22 capsid maturation
-
Prevelige P.E. Jr, Thomas D., Aubrey K.L., Towse S.A., Thomas G.J. Jr. Subunit conformational changes accompanying bacteriophage P22 capsid maturation. Biochemistry. 32:1993;537-543
-
(1993)
Biochemistry
, vol.32
, pp. 537-543
-
-
Prevelige Jr., P.E.1
Thomas, D.2
Aubrey, K.L.3
Towse, S.A.4
Thomas Jr., G.J.5
-
41
-
-
0025297936
-
The maturation-dependent conformational change of the major capsid protein of bacteriophage T4 involves a substantial change in secondary structure
-
Steven A.C., Greenstone H., Bauer A.C., Williams R.W. The maturation-dependent conformational change of the major capsid protein of bacteriophage T4 involves a substantial change in secondary structure. Biochemistry. 29:1990;5556-5561
-
(1990)
Biochemistry
, vol.29
, pp. 5556-5561
-
-
Steven, A.C.1
Greenstone, H.2
Bauer, A.C.3
Williams, R.W.4
-
42
-
-
0021103564
-
Structure and inherent properties of the bacteriophage lambda head shell. III. Spectroscopic studies on the expansion of the prohead
-
Kawaguchi K., Noda H., Katsura I. Structure and inherent properties of the bacteriophage lambda head shell. III. Spectroscopic studies on the expansion of the prohead. J. Mol. Biol. 164:1983;573-587
-
(1983)
J. Mol. Biol.
, vol.164
, pp. 573-587
-
-
Kawaguchi, K.1
Noda, H.2
Katsura, I.3
-
45
-
-
0030815133
-
Raster3D: Photorealistic molecular graphics
-
Merritt E.A., Bacon D.J. Raster3D: photorealistic molecular graphics. Methods Enzymol. 277:1997;505-524
-
(1997)
Methods Enzymol.
, vol.277
, pp. 505-524
-
-
Merritt, E.A.1
Bacon, D.J.2
|