Specific genetic markers for Tunisian fig germplasm: Evidence of morphological traits, random amplified polymorphic DNA and inter simple sequence repeats markers

Journal of Genetics and Breeding

Volumn 57, Issue 2, 2003, Pages 125-136

  Salhi Hannachi, A ^a   Mars, M ^b   Chatti, K ^a   Marrakchi, M ^a   Trifi, M ^a  

^a FACULTÉ DES SCIENCES DE TUNIS   (Tunisia)

^b Ecole Superieure d'Horticulture et d'Elevage de Chott Mariem   (Tunisia)

Author keywords

Ficus carica L.; Genetic diversity; ISSR; Morphological traits; RAPD

Indexed keywords

CARICA; CARICA PAPAYA; EMBRYOPHYTA; FICUS CARICA;

EID: 2942700386     PISSN: 03949257     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (32)

1. BAI, D., BRAUDLE J. AND REELEDER, R., 1997. Genetic diversity in North America ginseng (Panax quinquefolius L.) grown in Ontario detected by RAPD analysis. Genome. 40: 111-115.
2. BEER, S.C., GOFFREDA, J., PHILLIPS, T.D., MURPHY J., P. and SORRELLS, M.E., 1993. Assessment of genetic variation in Avena sterilis using morphological traits, isozymes and RFLPs. Crop Science. 33: 1386-1393.
3. BEN SALAH M., ANCILOTTI M. and LOUMEREN M., 1995. Etude pomologique de six variétés de figuier (Ficus carica L.) typiques de Beni Khedache. Plant Genet Res Newsletter. 104: 1620.
4. BEN ZECRI, J.P., 1973. L'analyse des correspondances. Ed. Dunod, Paris France, 619 p.
5. CONDIT, I.J., 1947. The fig. Ed. Walthams Mass. USA.
6. DAGNELIE, P., 1975. Théorie et méthodes statistiques. Applications agronomiques. Volume II: Les méthodes de linférence statistique. Eds., Les presses agronomiques de Gembloux. 463 p.
7. DELLAPORTA, S.L., WOOD, J. and HICKS, J.B., 1983. A plant DNA preparation. Version 11. Plant Mol. Biol. Reporter. 4: 19-21.
8. DE MASI, L., CIPOLLAROS, M., BERNARDO, G., GALDERISI, U., GALANO, G., GRASSI, G. PAVONE, A. and CASCINO, A., 2001. Clonal selection and molecular characterization by RAPD analysis of the fig (Ficus carica L.) «dottato» and «binco del cilento» cultivars in Italy. Second international symposium on fig. Caceres (Spain), pp: 23.
9. ESSELMAN, E.J., JIANQIANGT, L.D., CRAWFORD, J., WINDUS, J.L. and WOLF, A.D., 1999. Clonal diversity in the rare Calamagrotis proteri ssp. Insperata (Poaceaa): Comparative results for allozymes and random amplified polymorphic DNA (RAPD) and Inter Simple Sequence Repeat (ISSR) markers. Mol Ecol. 8: 443-451
10. FELSENSTEIN, J., 1993. Phylogenetic Interference Package (PHYLIP). Version 3.5. Departement of Genetics, University of Washington, Seattle, W.A. 98195, USA.
11. HAMRICK, J.L., 1990. Isozymes and the analysis of genetic structure in plant populations. In: Chapman and Hall, Soltis ED, soltis PS eds., Isozymes in Plant Biology, London, pp. 87-105.
12. HEDFI, J., TRIFI, M., HANNACHI SALHI, A., OULD MOHAMED SALEM, A., RHOUMA, A. and MARRAKCHI, M., 2001. Morphological and isoenzymatic polymorphism in Tunisian fig collection. Second international symposium on fig. Caceres (Spain), pp: 20.
13. HELGADOTTIR, A. and SNAYDON, R.W., 1986. Patterns of genetic variation among populations of Poa pratensis L. and Agrostis capillaris L. from Britain and Iceland. J. Appl. Ecol. 23: 703-719.
14. KHADARI, B., LASHERNES PH. and KJELLBERG, F., 1995. RAPD fingerprints for identification and genetic characterization of fig (Ficus carica L.) genotypes. J. Genet & Breed. 49: 77-86.
15. KHADARI, B., HOCHU, I., SANTONI, S., OUKABLI, A., ATER, M., ROGER J.P. and KJELLBERG, F., 2001. Which molecular markers are best suited to identify fig cultivars: a comparison of RAPD, ISSR and microsatellite markers. Second international symposium on fig. Caceres (Spain), pp. 22.
16. LAI, J.A., YANG, W.C. and HSIAO, J.Y., 2001. An assessment of genetic relationships in cultivated tea clones and native wild tea in Taiwan using RAPD and ISSR markers. Bot. Bull. Acad. Sc. 42: 93-100.
17. MARS, M., CHEBLI, T. and MARRAKCHI, M., 1998. Multivariate analysis of fig (Ficus carica L.) germplasm in southern Tunisia. Acta Hort. 480: 75-81.
18. NEI, M. and LI, W.H., 1979. Mathematical model for studying genetical variation in terms of restriction endonucleases. Proc. Natl. Acad. Sci. USA 74: 5267-5273.
19. NKONGOLO, K.K., MICHAEL, P., and GRATTON, W.S., 2002. Identification and characterization of RAPD markers inferring genetic relationships among Pine species. Genome. 45: 51-58.
20. RHOUMA, A., 1996. Les ressources phytogénétiques oasiennes: le figuier (Ficus carica L.). In: Proceedings of the 3ème Journées Nationales sur les Acquis de la Recherche Agronomique, Vétérinaire et Halieutique, Nabeul (Tunisie), pp. 29.
21. SALHI HANNACHI, A., TRIFI, M., ZEHDI, S., HEDFI, J., MARS, M., RHOUMA, A. and MARRAKCHI, M., 2002. Inter-simple sequence repeat fingerprints to access genetic diversity in Tunisian fig (Ficus carica L.) germplasm. Genet res. and crop. evol. In press.
22. SAMBROOK, J., FRITCH, E. F. and MANIATIS, T., 1998. Molecular cloning. A laboratory manual, second Edition.
23. SAS, 1990. SAS user's guide: SAS/STAT, SAS BASIC. Version 6.07, fourth edition. SAS incl, Box 8000. Cary, NC 27512-8000, Caty, NC: SAS institute Inc.
24. SCHEINER, S.M., 1993. Genetics and evolution of phenetic plasticity. Annu. Rev. Ecol. Syst. 74: 35-68.
25. SONG, GE., OLIVEIRA, G.C.X., SCHAAL, B.A., GAO, L.Z. and HONG, D.Y. 1999. RAPD variation within and between natural populations of the wild rice oryza rufipogon from China and Brazil. Heredity. 82: 638-644.
26. TIMMERMAN G.M. and MCCALLUM, J.A., 1993. Application of Random Amplified Polymorphic DAN (RAPD) markers in plant biology. In: Baker MJ eds., Grasslands for our world ed., SIR Publishing, Wellington, pp. 343-349.
27. TRIFI, M., RHOUMA, A. and MARRAKCHI, M., 2000. Phylogenetic relationships in Tunisian date-palm (Phoenix dactylifera L.) germplasm collection using DNA amplification fingerprinting. Agronomie. 20: 665-671.
28. TSANTILI, E., 1990. Changes during development of «Tsapela» fig fruits. Scientia Horticulturae. 44: 227-234.
29. VALDEYRON, G. and CROSSA-RAYNAUD, P., 1950. Les fruits de Tunisie. Annales de l'INRAT. 23: 1-24.
30. WILLIAMS, J.G.K., KUBELIK, A.R., LIVAK, K.J., RAFALSKI, J.A. and TINGEY, S.V., 1990. DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucl. Acids. Res. 18: 6531-6535.
31. WEIBLEN, G.D., 2000. Phylogenetic relationships of functionally diocious Ficus (Moraceae) based on ribosomal DNA sequences and morphology. American Journal of Botany. 87(9): 1357-1357.
32. ZIETKIEWICZ, E., RAFALSKI, A. and LABUDA, D., 1994. Genome fingerprinting by simple sequence repeats (SSR)-anchored polymerase chain reaction amplification. Genomics. 20: 176-183.