Molecular evolution of adenylating domain of aminoadipate reductase

BMC Evolutionary Biology

Volumn 3, Issue , 2003, Pages

  An, Kwang Deuk ^a   Nishida, Hiromi ^a   Miura, Yoshiharu ^a   Yokota, Akira ^a  

^a UNIVERSITY OF TOKYO   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA (MICROORGANISMS); FUNGI; INSERTION SEQUENCES;

EID: 2942618786     PISSN: 14712148     EISSN: None     Source Type: Journal    
DOI: 10.1186/1471-2148-3-9     Document Type: Article

References (23)

1. Brinkman AB, Bell SD, Lebbink RJ, de Vos WM and van der Oost J The Sulfolobus solfataricus Lrp-like protein LysM regulates lysine biosynthesis in response to lysine availability J Biol Chem 2002, 277:29537-29549
2. Nishida H, Nishiyama M, Kobashi N, Kosuge T, Hoshino T and Yamane H A prokaryotic gene cluster involved in synthesis of lysine through the amino adipate pathway: a key to the evolution of amino acid biosynthesis Genome Res 1999, 9:1175-1183
3. Velasco AM, Leguina JI and Lazcano A Molecular evolution of the lysine biosynthetic pathways J Mol Evol 2002, 55:445-459
4. Nishida H and Nishiyama M What is characteristic of fungal lysine synthesis through the α-aminoadipate pathway? J Mol Evol 2000, 51:299-302
5. Sinha AK and Bhattacharjee JK Lysine biosynthesis in Saccharomyces cerevisiae : conversion of α-aminoadipate into α-aminoadipate δ-semialdehyde Biochem J 1971, 125:743-749
6. Ehmann DE, Gehring AM and Walsh CT Lysine biosynthesis in Saccharomyces cerevisiae : mechanism of α-aminoadipate reductase (Lys2) involves post-translational phosphopantetheinylation by Lys5 Biochemistry 1999, 38:6171-6177
7. Guo S, Evans SA, Wilkes MB and Bhattacharjee JK Novel posttranslational activation of the LYS2-encoded α-aminoadipate reductase for biosynthesis of lysine and site-directed mutational analysis of conserved amino acid residues in the activation domain of Candida albicans J Bacteriol 2001, 183:7120-7125
8. Kleinkauf H and Von Döhren H A nonribosomal system of peptide biosynthesis Eur J Biochem 1996, 236:335-351
9. Morris ME and Jinks-Robertson S Nucleotide sequence of the LYS2 gene of Saccharomyces cerevisiae : homology to Bacillus brevis tyrocidine synthetase 1 Gene 1991, 98:141-145
10. Turgay K, Krause M and Marahiel MA Four homologous domains in the primary structure of GrsB are related to domains in a superfamily of adenylate-forming enzymes Mol Microbiol 1992, 6:529-546
11. Kasahara T and Kato T A new redox-cofactor vitamin for mammals Nature 2003, 422:832
12. Hijarrubia MJ, Aparico JF, Casqueiro JF and Martín JF Characterization of the lys2 gene of Acremonium chrysogenum encoding a functional α-aminoadipate activating and reducing enzyme Mol Gen Genet 2001, 264:755-762
13. An KD, Nishida H, Miura Y and Yokota A Aminoadipate reductase gene: a new fungal-specific gene for comparative evolutionary analyses BMC Evol Biol 2002, 2:6
14. Felsenstein J PHYLIP (Phylogeny Inference Package) version 3.6 Department of Genetics, University of Washington, Seattle 2002,
15. Nikkuni S, Kosaka N, Suzuki C and Mori K Comparative sequence analysis on the 18S rRNA gene of Aspergillus oryzae, A. sojae, A. flavus, A. parasticus, A.awamori and A. tamari J Gen Appl Microbiol 1996, 42:181-187
16. Borsuk P, Gniadkowski M, Kucharski R, Bisko M, Kanabus M, Stepien PP and Bartnik E Evolutionary conservation of the transcribed spacer sequences of the rDNA repeat unit in three species of the genus Aspergillus Acta Biochim Pol 1994, 41:73-77
17. Williams RH, Ward E and McCartney HA Methods for intergrated air sampling and DNA analysis for detection of airborne fungal spores Appl Environ Microbiol 2001, 67:2453-2459
18. Casqueiro J, Gutierrez S, Banuelos O, Fierro F, Velasco J and Martín JF Characterization of the lys2 gene of Penicillium chrysogenum encoding α-aminoadipic acid reductase Mol Gen Genet 1998, 259:549-556
19. Nikkuni S, Nakajima H, Hoshina S, Ohno M, Suzuki C, Kashiwagi Y and Mori K Evolutionary relationships among Aspergillus oryzae and related species based on the sequences of 18S rRNA genes and internal transcribed spacers J Gen Appl Microbiol 1998, 44:225-230
20. Altschul SF, Gish W, Miller W, Myers EW and Lipman DJ Basic local alignment search tool J Mol Biol 1990, 215:403-410
21. Kanehisa M, Goto S, Kawashima S and Nakaya A The KEGG databases at GenomeNet Nucleic Acids Res 2002, 30:42-46
22. Thompson JD, Higgins DG and Gibson TJ CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice Nucleic Acids Res 1994, 22:4673-4680
23. Kumar S, Tamura K, Jakobsen IB and Nei M MEGA 2: Molecular Evolutionary Genetics Analysis software Arizona State University, Tempe, Arizona 2001,