-
1
-
-
0028177303
-
DNA recognition by beta-sheets in the Arc repressor-operator crystal structure
-
Raumann B.E., Rould M.A., Pabo C.O., Sauer R.T. DNA recognition by beta-sheets in the Arc repressor-operator crystal structure. Nature. 367:1994;754-757
-
(1994)
Nature
, vol.367
, pp. 754-757
-
-
Raumann, B.E.1
Rould, M.A.2
Pabo, C.O.3
Sauer, R.T.4
-
2
-
-
0026641755
-
Crystal structure of the Met repressor-operator complex at 2.8 Å resolution reveals DNA recognition by b-strands
-
Somers W.S., Phillips E.V. Crystal structure of the Met repressor-operator complex at 2.8 Å resolution reveals DNA recognition by b-strands. Nature. 359:1992;387-393
-
(1992)
Nature
, vol.359
, pp. 387-393
-
-
Somers, W.S.1
Phillips, E.V.2
-
3
-
-
0028403242
-
Scanning mutagenesis of the Arc repressor as a functional probe of operator recognition
-
Brown B.M., Milla M.E., Smith T.L., Sauer R.T. Scanning mutagenesis of the Arc repressor as a functional probe of operator recognition. Nature Struct. Biol. 1:1994;164-168
-
(1994)
Nature Struct. Biol.
, vol.1
, pp. 164-168
-
-
Brown, B.M.1
Milla, M.E.2
Smith, T.L.3
Sauer, R.T.4
-
4
-
-
0001586362
-
Identifying determinants of folding and activity for a protein of unknown structure
-
Bowie J.U., Sauer R.T. Identifying determinants of folding and activity for a protein of unknown structure. Proc. Natl Acad. Sci. USA. 86:1989;2152-2156
-
(1989)
Proc. Natl Acad. Sci. USA
, vol.86
, pp. 2152-2156
-
-
Bowie, J.U.1
Sauer, R.T.2
-
5
-
-
0024977947
-
Sequence-specific binding of Arc repressor to DNA. Effects of operator mutations and modifications
-
Vershon A.K., Kelley R.D., Sauer R.T. Sequence-specific binding of Arc repressor to DNA. Effects of operator mutations and modifications. J. Biol. Chem. 264:1989;3267-3273
-
(1989)
J. Biol. Chem.
, vol.264
, pp. 3267-3273
-
-
Vershon, A.K.1
Kelley, R.D.2
Sauer, R.T.3
-
6
-
-
0029671279
-
Covalent attachment of Arc repressor subunits by a peptide linker enhances affinity for operator DNA
-
Robinson C.R., Sauer R.T. Covalent attachment of Arc repressor subunits by a peptide linker enhances affinity for operator DNA. Biochemistry. 35:1996;109-116
-
(1996)
Biochemistry
, vol.35
, pp. 109-116
-
-
Robinson, C.R.1
Sauer, R.T.2
-
7
-
-
0031165571
-
Optimization of electrostatic binding free energy
-
Lee L.P., Tidor B. Optimization of electrostatic binding free energy. J. Chem. Phys. 106:1997;8681-8690
-
(1997)
J. Chem. Phys.
, vol.106
, pp. 8681-8690
-
-
Lee, L.P.1
Tidor, B.2
-
9
-
-
84988087911
-
Calculating the electrostatic potential of molecules in solution: Method and error assessment
-
Gilson M.K., Sharp K.A., Honig B.H. Calculating the electrostatic potential of molecules in solution: method and error assessment. J. Comput. Chem. 9:1988;327-335
-
(1988)
J. Comput. Chem.
, vol.9
, pp. 327-335
-
-
Gilson, M.K.1
Sharp, K.A.2
Honig, B.H.3
-
10
-
-
0023779259
-
Calculation of the total electrostatic energy of a macromolecular system: Solvation energies, binding energies, and conformational analysis
-
Gilson M.K., Honig B.H. Calculation of the total electrostatic energy of a macromolecular system: solvation energies, binding energies, and conformational analysis. Proteins Struct. Funct. Genet. 4:1988;7-18
-
(1988)
Proteins Struct. Funct. Genet.
, vol.4
, pp. 7-18
-
-
Gilson, M.K.1
Honig, B.H.2
-
11
-
-
0025283002
-
Electrostatic interactions in macromolecules: Theory and applications
-
Sharp K.A., Honig B. Electrostatic interactions in macromolecules: theory and applications. Annu. Rev. Biophys. Biophys. Chem. 19:1990;301-332
-
(1990)
Annu. Rev. Biophys. Biophys. Chem.
, vol.19
, pp. 301-332
-
-
Sharp, K.A.1
Honig, B.2
-
12
-
-
0032789936
-
Electrostatic interactions in the GCN4 leucine zipper: Substantial contributions arise from intramolecular interactions enhanced on binding
-
Hendsch Z.S., Tidor B. Electrostatic interactions in the GCN4 leucine zipper: substantial contributions arise from intramolecular interactions enhanced on binding. Protein Sci. 8:1999;1381-1392
-
(1999)
Protein Sci.
, vol.8
, pp. 1381-1392
-
-
Hendsch, Z.S.1
Tidor, B.2
-
13
-
-
0031891022
-
Computation of electrostatic complements to proteins: A case of charge stabilized binding
-
Chong L.T., Dempster S.E., Hendsch Z.S., Lee L.P., Tidor B. Computation of electrostatic complements to proteins: a case of charge stabilized binding. Protein Sci. 7:1998;206-210
-
(1998)
Protein Sci.
, vol.7
, pp. 206-210
-
-
Chong, L.T.1
Dempster, S.E.2
Hendsch, Z.S.3
Lee, L.P.4
Tidor, B.5
-
14
-
-
21944443282
-
Optimizing electrostatic affinity in ligand-receptor binding: Theory, computation, and ligand properties
-
Kangas E., Tidor B. Optimizing electrostatic affinity in ligand-receptor binding: theory, computation, and ligand properties. J. Chem. Phys. 109:1998;7522-7545
-
(1998)
J. Chem. Phys.
, vol.109
, pp. 7522-7545
-
-
Kangas, E.1
Tidor, B.2
-
15
-
-
0023660382
-
Interaction of the bacteriophage P22 Arc repressor with operator DNA
-
Vershon A.K., Liao S.M., McClure W.R., Sauer R.T. Interaction of the bacteriophage P22 Arc repressor with operator DNA. J. Mol. Biol. 195:1987;323-331
-
(1987)
J. Mol. Biol.
, vol.195
, pp. 323-331
-
-
Vershon, A.K.1
Liao, S.M.2
McClure, W.R.3
Sauer, R.T.4
-
16
-
-
84986512474
-
CHARMM: A program for macromolecular energy, minimization, and dynamics calculations
-
Brooks B.R., Bruccoleri R.E., Olafson B.D., States D.J., Swaminathan S., Karplus M. CHARMM: a program for macromolecular energy, minimization, and dynamics calculations. J. Comp. Chem. 4:1983;187-217
-
(1983)
J. Comp. Chem.
, vol.4
, pp. 187-217
-
-
Brooks, B.R.1
Bruccoleri, R.E.2
Olafson, B.D.3
States, D.J.4
Swaminathan, S.5
Karplus, M.6
-
17
-
-
0024250301
-
Polar hydrogen positions in proteins: Empirical energy placement and neutron diffraction comparison
-
Brünger A.T., Karplus M. Polar hydrogen positions in proteins: empirical energy placement and neutron diffraction comparison. Proteins: Struct. Funct. Genet. 4:1988;148-156
-
(1988)
Proteins: Struct. Funct. Genet.
, vol.4
, pp. 148-156
-
-
Brünger, A.T.1
Karplus, M.2
-
18
-
-
6344260593
-
An all-atom empirical energy function for the simulation of nucleic-acids
-
Mackerell A.D., Wiorkiewiczkuczera J., Karplus M. An all-atom empirical energy function for the simulation of nucleic-acids. J. Am. Chem. Soc. 117:1995;11946-11975
-
(1995)
J. Am. Chem. Soc.
, vol.117
, pp. 11946-11975
-
-
MacKerell, A.D.1
Wiorkiewiczkuczera, J.2
Karplus, M.3
-
19
-
-
0023280069
-
Calculation of electrostatic potentials in an enzyme active site
-
Gilson M.K., Honig B.H. Calculation of electrostatic potentials in an enzyme active site. Nature. 330:1987;84-86
-
(1987)
Nature
, vol.330
, pp. 84-86
-
-
Gilson, M.K.1
Honig, B.H.2
-
20
-
-
0027482287
-
P22 Arc repressor: Enhanced expression of unstable mutants by addition of polar C-terminal sequences
-
Milla M.E., Brown B.M., Sauer R.T. P22 Arc repressor: enhanced expression of unstable mutants by addition of polar C-terminal sequences. Protein Sci. 2:1993;2198-2205
-
(1993)
Protein Sci.
, vol.2
, pp. 2198-2205
-
-
Milla, M.E.1
Brown, B.M.2
Sauer, R.T.3
|