Gene expression alterations over large chromosomal regions in cancers include multiple genes unrelated to malignant progression

Proceedings of the National Academy of Sciences of the United States of America

Volumn 101, Issue 23, 2004, Pages 8715-8720

  Masayesva, Brett G ^a   Ha, Patrick ^a   Garrett Mayer, Elizabeth ^a   Pilkington, Thomas ^a   Mao, Rong ^b   Pevsner, Jonathan ^b   Speed, Traci ^c   Benoit, Nicole ^a   Moon, Chul So ^a   Sidransky, David ^a   Westra, William H ^a   Califano, Joseph ^a  

^a DEPARTMENT OF PATHOLOGY   (United States)

^b KENNEDY KRIEGER INSTITUTE   (United States)

^c BATES COLLEGE   (United States)

Author keywords

Allelic imbalance; Chromosomal mapping; Comparative genomic hybridization; Head and neck squamous cell carcinoma; Microarrays

Indexed keywords

ALLELIC IMBALANCE; ARTICLE; CANCER; CARCINOGENESIS; CHROMOSOME 22P; CHROMOSOME 3P; CHROMOSOME ARM; CHROMOSOME MAP; CLINICAL ARTICLE; COMPARATIVE GENOMIC HYBRIDIZATION; CONTROLLED STUDY; CORRELATION ANALYSIS; DNA MICROARRAY; GENE EXPRESSION REGULATION; GENE FUNCTION; GENE OVEREXPRESSION; HEAD AND NECK CARCINOMA; HUMAN; HUMAN TISSUE; PRIORITY JOURNAL; SOLID TUMOR; TUMOR GROWTH;

ALLELIC IMBALANCE; CASE-CONTROL STUDIES; CHROMOSOMES, HUMAN; CHROMOSOMES, HUMAN, PAIR 22; CHROMOSOMES, HUMAN, PAIR 3; DNA, NEOPLASM; GENE DOSAGE; GENE EXPRESSION; GENE EXPRESSION PROFILING; HEAD AND NECK NEOPLASMS; HUMANS; NEOPLASMS;

EID: 2942588529     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.0400027101     Document Type: Article

References (28)

1. Landis, S. H., Murray, T., Bolden, S. & Wingo, P. A. (1998) CA Cancer J. Clin. 48, 6-29.
2. Parkin, D. M., Laara, E. & Muir, C. S. (1988) Int. J. Cancer 41, 184-197.
3. Redon, R., Muller, D., Caulee, K., Wanherdrick, K., Abecassis, J. & du Manoir, S. (2001) Cancer Res. 61, 4122-4129.
4. Bergamo, N. A., Rogatto, S. R., Poli-Frederico, R. C., Reis, P. P., Kowalski, L. P., Zielenska, M. & Squire, J. A. (2000) Cancer Genet. Cytogenet. 119, 48-55.
5. Bockmuhl, U., Wolf, G., Schmidt, S., Schwendel, A., Jahnke, V., Dietel, M. & Petersen, I. (1998) Head Neck 20, 145-151.
6. Huang, Q., Yu, G. P., McCormick, S. A., Mo, J., Datta, B., Mahimkar, M., Lazarus, P., Schaffer, A. A., Desper, R. & Schantz, S. P. (2002) Genes Chromosomes Cancer 34, 224-233.
7. Singh, B., Gogineni, S. K., Sacks, P. G., Shaha, A. R., Shah, J. P., Stoffel, A. & Rao, P. H. (2001) Cancer Res. 61, 4506-4513.
8. Wolff, E., Girod, S., Liehr, T., Vorderwulbecke, U., Ries, J., Steininger, H. & Gebhart, E. (1998) Oral Oncol. 34, 186-190.
9. Alevizos, I., Mahadevappa, M., Zhang, X., Ohyama, H., Kohno, Y., Posner, M., Gallagher, G. T., Varvares, M., Cohen, D., Kim, D., et al. (2001) Oncogene 20, 6196-6204.
10. Belbin, T. J., Singh, B., Barber, I., Socci, N., Wenig, B., Smith, R., Prystowsky, M. B. & Childs, G. (2002) Cancer Res. 62, 1184-1190.
11. Boyle, J. O., Hakim, J., Koch, W., van der Riet, P., Hruban, R. H., Roa, R. A., Correo, R., Eby, Y. J., Ruppert, J. M. & Sidransky, D. (1993) Cancer Res. 53, 4477-4480.
12. Kamb, A., Gruis, N. A., Weaver-Feldhaus, J., Liu, Q., Harshman, K., Tavtigian, S. V., Stockert, E., Day, R. S., III, Johnson, B. E. & Skolnick, M. H. (1994) Science 264, 436-440.
13. Nobori, T., Miura, K., Wu, D. J., Lois, A., Takabayashi, K. & Carson, D. A. (1994) Nature 368, 753-756.
14. Nawroz, H., van der Riet, P., Hruban, R. H., Koch, W., Ruppert, J. M. & Sidransky, D. (1994) Cancer Res. 54, 1152-1155.
15. Maestro, R., Gasparotto, D., Vukosavljevic, T., Barzan, L., Sulfato, S. & Boiocchi, M. (1993) Cancer Res. 53, 5775-5779.
16. Reed, A. L., Califano, J., Cairns, P., Westra, W. H., Jones, R. M., Koch, W., Ahrendt, S., Eby, Y., Sewell, D., Nawroz, H., et al. (1996) Cancer Res. 56, 3630-3633.
17. Wu, C. L., Sloan, P., Read, A. P., Harris, R. & Thakker, N. (1994) Cancer Res. 54, 6484-6488.
18. Califano, J., van der Riet, P., Westra, W., Nawroz, H., Clayman, G., Piantadosi, S., Corio, R., Lee, D., Greenberg, B., Koch, W., et al. (1996) Cancer Res. 56, 2488-2492.
19. Speicher, M. R., Howe, C., Crotty, P., du Manoir, S., Costa, J. & Ward, D. C. (1995) Cancer Res. 55, 1010-1013.
20. Yamaguchi, K., Wu, L., Caballero, O. L., Hibi, K., Trink, B., Resto, V., Cairns, P., Okami, K., Koch, W. M., Sidransky, D. & Jen, J. (2000) Int. J. Cancer 86, 684-689.
21. Colantuoni, C., Henry, G., Zeger, S. & Pevsner, J. (2002) Bioinformatics 18, 1540-1541.
22. Tusher, V. G., Tibshirani, R. & Chu, G. (2001) Proc. Natl. Acad. Sci. USA 98, 5116-5121.
23. Bouton, C. M. & Pevsner, J. (2000) Bioinformatics 16, 1038-1039.
24. Mao, R., Zielke, C. L., Ronald Zielke, H. & Pevsner, J. (2003) Genomics 81, 457-467.
25. Ha, P. K., Benoit, N. E., Yochem, R., Sciubba, J., Zahurak, M., Sidransky, D., Pevsner, J., Westra, W. H. & Califano, J. (2003) Clin. Cancer Res. 9, 3058-3064.
26. Roz, L., Wu, C. L., Porter, S., Scully, C., Speight, P., Read, A., Sloan, P. & Thakker, N. (1996) Cancer Res. 56, 1228-1231.
27. Squire, J. A., Bayani, J., Luk, C., Unwin, L., Tokunaga, J., MacMillan, C., Irish, J., Brown, D. & Kamel-Reid, S. (2002) Head Neck 24, 874-887.
28. Ashman, J. N., Patmore, H. S., Condon, L. T., Cawkwell, L., Stafford, N. D. & Greenman, J. (2003) Br. J. Cancer 89, 864-869.