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Volumn 5, Issue , 2004, Pages

Computational protein biomarker prediction: A case study for prostate cancer

Author keywords

ANOVA F statistic; B W ratio; Biomarker discovery; Feature (peak) selection; Prostate cancer; SELD1 TOF mass spectrometry; Statistical discrimination methods; Support vector machine

Indexed keywords

BIO-MARKER DISCOVERY; FEATURE (PEAK) SELECTION; PROSTATE CANCERS; STATISTICAL DISCRIMINATION METHODS; TOF MASS SPECTROMETRY;

EID: 2942572932     PISSN: 14712105     EISSN: None     Source Type: Journal    
DOI: 10.1186/1471-2105-5-26     Document Type: Article
Times cited : (86)

References (14)
  • 3
    • 0347181849 scopus 로고    scopus 로고
    • Data review and re-assessment of ovarian cancer serum proteomic profiling
    • Sorace J, Zhan M: data review and re-assessment of ovarian cancer serum proteomic profiling. BMC Bioinformatics 2003, 4:24.
    • (2003) BMC Bioinformatics , vol.4 , pp. 24
    • Sorace, J.1    Zhan, M.2
  • 4
    • 0036324715 scopus 로고    scopus 로고
    • Proteomics and bioinformatics approaches for identification of serum biomarkers to detect breast cancer
    • Li J, Zhang Z, Rosenzweig J, Wang YY, Chan DW: Proteomics and bioinformatics approaches for identification of serum biomarkers to detect breast cancer. Clin Chem 2002, 48:1296-1304.
    • (2002) Clin. Chem. , vol.48 , pp. 1296-1304
    • Li, J.1    Zhang, Z.2    Rosenzweig, J.3    Wang, Y.Y.4    Chan, D.W.5
  • 6
    • 0036791428 scopus 로고    scopus 로고
    • Boosted decision tree analysis of surface-enhanced laser desorption/lonlzatton mass spectral serum profiles discriminates prostate cancer from noncancer patients
    • Qu Y, Adam BL, Yasui Y, Ward MD, Cazares LH, Schellhammer PF, Feng Z, Semmes OJ, Wright GL: Boosted decision tree analysis of surface-enhanced laser desorption/lonlzatton mass spectral serum profiles discriminates prostate cancer from noncancer patients. Clin Chem 2002, 48:1835-1843.
    • (2002) Clin. Chem. , vol.48 , pp. 1835-1843
    • Qu, Y.1    Adam, B.L.2    Yasui, Y.3    Ward, M.D.4    Cazares, L.H.5    Schellhammer, P.F.6    Feng, Z.7    Semmes, O.J.8    Wright, G.L.9
  • 7
    • 0742269626 scopus 로고    scopus 로고
    • Probabilistic disease classification of expression-dependent proteomic data from mass spectrometry of human serum
    • Lilien R, Farid H, Donald B: Probabilistic disease classification of expression-dependent proteomic data from mass spectrometry of human serum. J Comp Biol 2003, 10(6):925-946.
    • (2003) J. Comp. Biol. , vol.10 , Issue.6 , pp. 925-946
    • Lilien, R.1    Farid, H.2    Donald, B.3
  • 8
    • 0141631754 scopus 로고    scopus 로고
    • Protocols for disease classification from mass spectrometry data
    • Wagner M, Naik D, Pothen A: Protocols for disease classification from mass spectrometry data. Proteomics 2003, 3:1692-1698.
    • (2003) Proteomics , vol.3 , pp. 1692-1698
    • Wagner, M.1    Naik, D.2    Pothen, A.3
  • 9
    • 0141520564 scopus 로고    scopus 로고
    • Identification and validation of a potential lung cancer serum biomarker detected by matrix-assisted laser desorption/ionization-time of flight spectra analysis
    • Howard B, Wang M, Campa M, Corro C, Fitzgerald M, E Patz J: Identification and validation of a potential lung cancer serum biomarker detected by matrix-assisted laser desorption/ionization-time of flight spectra analysis. Proteomics 2003, 3:1720-1724.
    • (2003) Proteomics , vol.3 , pp. 1720-1724
    • Howard, B.1    Wang, M.2    Campa, M.3    Corro, C.4    Fitzgerald, M.E.5    Patz, J.6
  • 10
    • 84874648020 scopus 로고    scopus 로고
    • SvmFu
    • Rifkin R: SvmFu. [http://five-percent-nation.mit.edu/SvmFu/].
    • Rifkin, R.1
  • 11
    • 0003465414 scopus 로고    scopus 로고
    • Multivariate Data Reduction and Discrimination with
    • SAS Software SAS Institute and J Wiley and Sons
    • Khattree R, Naik D: Multivariate Data Reduction and Discrimination with SAS Software SAS Institute and J Wiley and Sons; 2000.
    • (2000)
    • Khattree, R.1    Naik, D.2
  • 12
    • 0000963583 scopus 로고
    • Linear and nonlinear separation of patterns by linear programming
    • Mangasarian OL: Linear and nonlinear separation of patterns by linear programming. Oper Res 1965, 13:444-452.
    • (1965) Oper. Res. , vol.13 , pp. 444-452
    • Mangasarian, O.L.1
  • 13
    • 0003798635 scopus 로고    scopus 로고
    • An Introduction to Support Vector Machines
    • Cambridge University Press, Cambridge UK
    • Cristianini N, Shawe-Taylor J: An Introduction to Support Vector Machines Cambridge University Press, Cambridge, UK; 2000.
    • (2000)
    • Cristianini, N.1    Shawe-Taylor, J.2
  • 14
    • 1842766753 scopus 로고    scopus 로고
    • Multicategory support vector machines
    • Lee Y, Lin Y, Wahba G: Multicategory support vector machines. Comp Sci Stat 2001, 33:498-512.
    • (2001) Comp. Sci. Stat. , vol.33 , pp. 498-512
    • Lee, Y.1    Lin, Y.2    Wahba, G.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.