-
1
-
-
0035812694
-
Protein structure prediction and structural genomics
-
D. Baker and A. Sali, "Protein structure prediction and structural genomics," Science, vol. 294, pp. 93-96, 2001.
-
(2001)
Science
, vol.294
, pp. 93-96
-
-
Baker, D.1
Sali, A.2
-
2
-
-
0017411710
-
The Protein Data Bank: A computer-based archival file for macromolecular structures
-
F. Bernstein, T. Koetzle, G. Williams, E. Meyer, M. Brice, J. Rodgers, O. Kennard, T. Shimanouchi and M. Tasumi, "The Protein Data Bank: A computer-based archival file for macromolecular structures," J Mol Biol, vol. 112, pp. 535-540, 1977.
-
(1977)
J Mol Biol
, vol.112
, pp. 535-540
-
-
Bernstein, F.1
Koetzle, T.2
Williams, G.3
Meyer, E.4
Brice, M.5
Rodgers, J.6
Kennard, O.7
Shimanouchi, T.8
Tasumi, M.9
-
3
-
-
0036968925
-
De novo prediction of three-dimensional structures for major protein families
-
R. Bonneau, C. Straws, C. Rohl, D. Chivian, P. Bradley, L. Malmstrom, T. Robertson and D. Baker, "De novo prediction of three-dimensional structures for major protein families," J Mol Biol, vol. 322, pp. 65-78, 2002.
-
(2002)
J Mol Biol
, vol.322
, pp. 65-78
-
-
Bonneau, R.1
Straws, C.2
Rohl, C.3
Chivian, D.4
Bradley, P.5
Malmstrom, L.6
Robertson, T.7
Baker, D.8
-
4
-
-
0032555696
-
Prediction of local structure in proteins using a library of sequence-structure motif
-
C. Bystroff and D. Baker, "Prediction of local structure in proteins using a library of sequence-structure motif," J Mol Biol, vol. 281, pp. 565-577, 1998.
-
(1998)
J Mol Biol
, vol.281
, pp. 565-577
-
-
Bystroff, C.1
Baker, D.2
-
5
-
-
0033405214
-
Hidden Markov Model approach for identifying the modular framework of the protein backbone
-
A. Camproux, P. Tuffery, J. Chevrolat, J. Boisvieux and S. Hazout, "Hidden Markov Model approach for identifying the modular framework of the protein backbone," Protein Eng, vol. 12, no. 12, pp. 1063-1073, 1999.
-
(1999)
Protein Eng
, vol.12
, Issue.12
, pp. 1063-1073
-
-
Camproux, A.1
Tuffery, P.2
Chevrolat, J.3
Boisvieux, J.4
Hazout, S.5
-
6
-
-
0011735482
-
Beyond the secondary structures : The structural alphabets
-
A. de Brevern, A. Camproux, C. Etchebest, S. Hazout and P. Tuffery, "Beyond the secondary structures : The structural alphabets," Recent Adv. In Prot. Eng., vol. 1, pp. 319-331, 2001.
-
(2001)
Recent Adv Prot. Eng.
, vol.1
, pp. 319-331
-
-
De Brevern, A.1
Camproux, A.2
Etchebest, C.3
Hazout, S.4
Tuffery, P.5
-
7
-
-
0034669774
-
Bayesian probabilistic approach for prediction backbone structures in terms of protein blocks
-
A. de Brevern, C. Etchebest and S. Hazout, "Bayesian probabilistic approach for prediction backbone structures in terms of protein blocks," Proteins, vol. 41, no. 3, pp. 271-287, 2000.
-
(2000)
Proteins
, vol.41
, Issue.3
, pp. 271-287
-
-
De Brevern, A.1
Etchebest, C.2
Hazout, S.3
-
8
-
-
0035636385
-
Compacting local protein folds with a hybrid protein
-
A. de Brevern and S. Hazout, "Compacting local protein folds with a Hybrid Protein," Theoretical Chemistry Accounts, vol. 106(1/2), pp. 3647, 2001.
-
(2001)
Theoretical Chemistry Accounts
, vol.106
, Issue.1-2
, pp. 3647
-
-
De Brevern, A.1
Hazout, S.2
-
9
-
-
0037433050
-
Hybrid Protein Model' for optimally defining 3D protein structure fragments
-
A. de Brevern and S. Hazout, '"Hybrid Protein Model' for optimally defining 3D protein structure fragments," Bioinformatics, vol. 19, pp. 345-353, 2003.
-
(2003)
Bioinformatics
, vol.19
, pp. 345-353
-
-
De Brevern, A.1
Hazout, S.2
-
10
-
-
0036893073
-
Extensíon of a local back-bone description using a structural alphabet. A new approach to the seqnence-structure relationship
-
A. de Brevern, H. Valadie, H. S and C. Etchebest, "Extensíon of a local back-bone description using a structural alphabet. A new approach to the seqnence-structure relationship," Protein Science, vol. 11, pp. 2871-2886, 2002.
-
(2002)
Protein Science
, vol.11
, pp. 2871-2886
-
-
De Brevern, A.1
Valadie, H.S.H.2
Etchebest, C.3
-
11
-
-
0031052447
-
Patterns, structures, and amino acid frequencies in structural building blocks, a protein secondary structure classification scheme
-
J. Fetrow, M. Palnmbo and G. Berg, "Patterns, structures, and amino acid frequencies in structural building blocks, a protein secondary structure classification scheme," Proteins, vol. 27, pp. 249-271, 1997.
-
(1997)
Proteins
, vol.27
, pp. 249-271
-
-
Fetrow, J.1
Palnmbo, M.2
Berg, G.3
-
12
-
-
0033152756
-
Estimating the total number of protein folds
-
S. Govindarajan, R. Recabarren and R. Goldstein, "Estimating the total number of protein folds," Proteins, vol. 35, pp. 408-414, 1999.
-
(1999)
Proteins
, vol.35
, pp. 408-414
-
-
Govindarajan, S.1
Recabarren, R.2
Goldstein, R.3
-
13
-
-
0029878720
-
VMD - Visual molecular dynamics
-
W. Humphrey, A. Dalke and K. Schulten, "VMD - Visual Molecular Dynamics," J Mol Graph, vol. 14: Pp. 33-38, 1996.
-
(1996)
J Mol Graph
, vol.14
, pp. 33-38
-
-
Humphrey, W.1
Dalke, A.2
Schulten, K.3
-
14
-
-
0020068152
-
Self-organized formation of topologically correct feature maps
-
T. Kohonen, "Self-organized formation of topologically correct feature maps," Biol Cyber, vol. 43, pp. 5W9, 1982.
-
(1982)
Biol Cyber
, vol.43
, pp. 5W9
-
-
Kohonen, T.1
-
16
-
-
0001927585
-
On information and sufficiency
-
S. Kullback and R. Leibler, "On information and sufficiency," Ann Math Stat, vol. 22, pp. 79-86, 1951.
-
(1951)
Ann Math Stat
, vol.22
, pp. 79-86
-
-
Kullback, S.1
Leibler, R.2
-
17
-
-
0035172128
-
PDB-REPRDB: A database of representative protein chains from the Protein Data Bank (PDB)
-
T. Noguchi, H. Matsuda and Y. Akiyama, "PDB-REPRDB: A database of representative protein chains from the Protein Data Bank (PDB)," Nucl Acids Res, vol. 29, no. 1, pp. 219-220, 2001.
-
(2001)
Nucl Acids Res
, vol.29
, Issue.1
, pp. 219-220
-
-
Noguchi, T.1
Matsuda, H.2
Akiyama, Y.3
-
18
-
-
0036568279
-
Improving the prediction of protein secondary structure in three and eight classes using recurrent neural networks and profiles
-
G. Pollastri, D. Przybylski, B. Rust and P. Baldi, "Improving the Prediction of Protein Secondary Structure in Three and Eight Classes Using Recurrent Neural Networks and Profiles," Proteins, vol. 47, pp. 228-235, 2002.
-
(2002)
Proteins
, vol.47
, pp. 228-235
-
-
Pollastri, G.1
Przybylski, D.2
Rust, B.3
Baldi, P.4
-
19
-
-
0024610919
-
A tutorial on hidden markov models and selected applications in speech recognition
-
L. Rabiner, "A tutorial on Hidden Markov Models and selected applications in speech recognition," Proc. of the IEEE, vol. 77, pp. 257-285, 1989.
-
(1989)
Proc. of the IEEE
, vol.77
, pp. 257-285
-
-
Rabiner, L.1
-
20
-
-
0025326949
-
Automatic definition of reccurent local structure motifs in proteins
-
M. Rooman, J. Rodriguez and S. Wodak, "Automatic definition of reccurent local structure motifs in proteins," J Mol Biol, vol. 213, pp. 327-336, 1990.
-
(1990)
J Mol Biol
, vol.213
, pp. 327-336
-
-
Rooman, M.1
Rodriguez, J.2
Wodak, S.3
-
21
-
-
0029860175
-
Local structural motifs of protein backbones are classified by self-organizing neural networks
-
J. Schuchhardt, G. Schneider, J. Reichelt, D. Schomburg and P. Wrede, "Local structural motifs of protein backbones are classified by self-organizing neural networks," Protein Eng, vol. 9, no. 10, pp. 833-842, 1996.
-
(1996)
Protein Eng
, vol.9
, Issue.10
, pp. 833-842
-
-
Schuchhardt, J.1
Schneider, G.2
Reichelt, J.3
Schomburg, D.4
Wrede, P.5
-
22
-
-
0024395940
-
A 3D building blocks approach to analyzing and predicting structure of proteins
-
.R. Unger, D. Harel, S. Wherland and J. Sussman, "A 3D building blocks approach to analyzing and predicting structure of proteins," Proteins, vol. 5, pp. 355-373, 1989.
-
(1989)
Proteins
, vol.5
, pp. 355-373
-
-
Unger, R.1
Harel, D.2
Wherland, S.3
Sussman, J.4
-
23
-
-
0035703315
-
Application of PROSPECT in CASPI: Characterizing protein structures with new folds
-
D. Xu, O. Crawford, P. LoCascio and Y. Xu, "Application of PROSPECT in CASPI: Characterizing protein structures with new folds: Proteins, vol. S5, pp. 140-148, 2001.
-
(2001)
Proteins
, vol.S5
, pp. 140-148
-
-
Xu, D.1
Crawford, O.2
LoCascio, P.3
Xu, Y.4
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