Host cell reactivation of plasmids containing oxidative DNA lesions is defective in Cockayne syndrome but normal in UV-sensitive syndrome fibroblasts

DNA Repair

Volumn 5, Issue 1, 2006, Pages 13-22

  Spivak, Graciela ^a   Hanawalt, Philip C ^a  

^a STANFORD UNIVERSITY   (United States)

Author keywords

Cockayne syndrome; Host cell reactivation; Oxidative base damage; Transcription coupled DNA repair; UV sensitive syndrome

Indexed keywords

8 HYDROXYGUANINE; BETA GALACTOSIDASE; GLYCOL; HYDROGEN PEROXIDE; SINGLE STRANDED DNA; THYMINE DERIVATIVE;

ARTICLE; CELL ACTIVATION; CELL LINE; COCKAYNE SYNDROME; CONTROLLED STUDY; DNA DAMAGE; DNA STRAND BREAKAGE; FIBROBLAST; GENE EXPRESSION; GENETIC TRANSFECTION; HOST CELL; HUMAN; HUMAN CELL; PLASMID; PRIORITY JOURNAL; ULTRAVIOLET RADIATION; WILD TYPE;

BETA-GALACTOSIDASE; CELL SURVIVAL; CELLS, CULTURED; COCKAYNE SYNDROME; DNA DAMAGE; DNA REPAIR; DNA, SINGLE-STRANDED; FIBROBLASTS; HUMANS; HYDROGEN PEROXIDE; OXIDATIVE STRESS; PLASMIDS; SYNDROME; THYMINE; TRANSFECTION; ULTRAVIOLET RAYS;

EID: 29244483920     PISSN: 15687864     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.dnarep.2005.06.017     Document Type: Article

References (45)

1. V.A. Bohr, D.H. Phillips, and P.C. Hanawalt Heterogeneous DNA damage and repair in the mammalian genome Cancer Res. 47 1987 6426 6436
2. J. de Boer, and J.H. Hoeijmakers Nucleotide excision repair and human syndromes Carcinogenesis 21 2000 453 460
3. A.R. Lehmann DNA repair-deficient diseases, xeroderma pigmentosum, Cockayne syndrome and trichothiodystrophy Biochimie 85 2003 1101 1111
4. J. Venema, L. Mullenders, A. Natarajan, A. van Zeeland, and L. Mayne The genetic defect in Cockayne syndrome is associated with a defect in repair of UV-induced DNA damage in transcriptionally active DNA Proc. Natl. Acad. Sci. U.S.A. 87 1991 4707 4711
5. F. Le Page, E.E. Kwoh, A. Avrutskaya, A. Gentil, S.A. Leadon, A. Sarasin, and P.K. Cooper Transcription-coupled repair of 8-oxoguanine: requirement for XPG, TFIIH, and CSB and implications for Cockayne syndrome Cell 101 2000 159 171
6. M. Ljungman, and F. Zhang Blockage of RNA polymerase as a possible trigger for UV light-induced apoptosis Oncogene 13 1996 823 831
7. M. Yamaizumi, and T. Sugano UV-induced nuclear accumulation of p53 is evoked through DNA damage of actively transcribed genes independent of the cell cycle Oncogene 9 1994 2775 2784
8. S.A. Leadon, and P.K. Cooper Preferential repair of ionizing radiation-induced damage in the transcribed strand of an active human gene is defective in Cockayne syndrome Proc. Natl. Acad. Sci. U.S.A. 90 1993 10499 10503
9. H. Miyauchi-Hashimoto, T. Akaeda, T. Maihara, M. Ikenaga, and T. Horio Cockayne syndrome without typical clinical manifestations including neurologic abnormalities J. Am. Acad. Dermatol. 39 4 Pt 1 1998 565 570
10. K. Horibata, Y. Iwamoto, I. Kuraoka, N.G.J. Jaaspers, A. Kurimasa, M. Oshimura, M. Ichihashi, and K. Tanaka Complete absence of Cockayne syndrome group B gene product gives rise to UV-sensitive syndrome but not Cockayne syndrome Proc. Natl. Acad. Sci. U.S.A. 101 2004 15410 15415
11. G. Spivak, UV-sensitive syndrome, Mutat. Res. 577 (1-2) 162-169, doi:10.1016/j.mrfmmm.2005.03.017.
12. M. Ohta, M. Nitta, and M. Yamaizumi High sensitivity of the ultraviolet-induced p53 response in ultraviolet-sensitive syndrome, a photosensitive disorder with a putative defect in deoxyribonucleic acid repair of actively transcribed genes Mutat. Res. 433 1999 23 32
13. G. Spivak, T. Itoh, T. Matsunaga, O. Nikaido, P. Hanawalt, and M. Yamaizumi Ultraviolet-sensitive syndrome cells are defective in transcription-coupled repair of cyclobutane pyrimidine dimers DNA Repair 1 2002 629 643
14. C.A. Smith, and P.C. Hanawalt Repair replication in cultured normal and transformed human fibroblasts Biochim. Biophys. Acta 447 1976 121 132
15. T. Itoh, and M. Yamaizumi UVs syndrome: establishment and characterization of fibroblastic cell lines transformed with simian virus 40 DNA J. Invest. Dermatol. 114 2000 101 106
16. N.G. Jaspers, A. Raams, M.J. Kelner, J.M. Ng, Y.M. Yamashita, S. Takeda, T.C. McMorris, and J.H. Hoeijmakers Anti-tumour compounds illudin S and Irofulven induce DNA lesions ignored by global repair and exclusively processed by transcription- and replication-coupled repair pathways DNA Repair 1 2002 1027 1038
17. D. Nowak Hydrogen peroxide release from human polymorphonuclear leukocytes measured with horseradish peroxidase and o-dianisidine. Effect of various stimulators and cytochalasin B Biomed. Biochim. Acta 49 1990 353 362
18. S.W. Ballinger, B. Van Houten, G.F. Jin, C.A. Conklin, and B.F. Godley Hydrogen peroxide causes significant mitochondrial DNA damage in human RPE cells Exp. Eye Res. 68 1999 765 772
19. H.L. Katcher, and S.S. Wallace Characterization of the Escherichia coli X-ray endonuclease, endonuclease III Biochemistry 22 1983 4071 4081
20. T. Lindahl Measurement of sites of base loss E. Friedberg P. Hanawalt DNA Repair: A Laboratory Manual of Research Procedures 1981 Marcel Dekker, Inc. New York 213 216
21. R.M. Anson, E. Hudson, and V.A. Bohr Mitochondrial endogenous oxidative damage has been overestimated FASEB J. 14 2000 355 360
22. M.E. Greenberg, and E.B. Ziff Stimulation of 3T3 cells induces transcription of the c-fos proto-oncogene Nature 311 5985 1984 433 438
23. A. Stary, and A. Sarasin Simian virus 40 (SV40) large T antigen-dependent amplification of an Epstein-Barr virus-SV40 hybrid shuttle vector integrated into the human HeLa cell genome J. Gen. Virol. 73 1992 1679 1685
24. I. Mellon, G. Spivak, and P.C. Hanawalt Selective removal of transcription-blocking DNA damage from the transcribed strand of the mammalian DHFR gene Cell 51 1987 241 249
25. G. Spivak, and P. Hanawalt Determination of damage and repair in specific DNA sequences Methods: A Companion to Methods in Enzymology 7 1995 147 161
26. I. Mellon, and P.C. Hanawalt Induction of the Escherichia coli lactose operon selectively increases repair of its transcribed DNA strand Nature 342 1989 95 98
27. A. Viswanathan, and P.W. Doetsch Effects of nonbulky DNA base damages on Escherichia coli RNA polymerase-mediated elongation and promoter clearance J. Biol. Chem. 273 1998 21276 21281
28. A.J. Parsian, M.C. Funk, T.Y. Tao, and C.R. Hunt The effect of DNA damage on the formation of protein/DNA complexes Mutat. Res. 501 2002 105 113
29. R. Ghosh, and D.L. Mitchell Effect of oxidative DNA damage in promoter elements on transcription factor binding Nucleic Acids Res. 27 1999 3213 3218
30. A.K. Ganesan, J. Hunt, and P.C. Hanawalt Expression and nucleotide excision repair of a UV-irradiated reporter gene in unirradiated human cells Mutat. Res. 433 1999 117 126
31. D. Scicchitano, E. Olesnicky, and A. Dimitri Transcription and DNA adducts: what happens when the message gets cut off? DNA Repair 3 2004 1537 1548
32. H. de Waard, J. de Wit, J.O. Andressoo, C.T. van Oostrom, B. Riis, A. Weimann, H.E. Poulsen, H. van Steeg, J.H. Hoeijmakers, and G.T. van der Horst Different effects of CSA and CSB deficiency on sensitivity to oxidative DNA damage Mol. Cell. Biol. 24 18 2004 7941 7948
33. G.L. Chan, and J.B. Little Cross-sensitivity of certain xeroderma pigmentosum and Cockayne syndrome fibroblast strains to both ionizing radiation and ultraviolet light Mol. Gen. Genet. 181 1981 562 563
34. S. Tornaletti, L.S. Maeda, D.R. Lloyd, D. Reines, and P.C. Hanawalt Effect of thymine glycol on transcription elongation by T7 RNA polymerase and mammalian RNA polymerase II J. Biol. Chem. 276 2001 45367 45371
35. J. Kwei, I. Kuraoka, K. Horibata, M. Ubukata, E. Kobatake, S. Iwai, H. Handa, and K. Tanaka Blockage of RNA polymerase II at a cyclobutane pyrimidine dimer and 6-4 photoproduct Biochem. Biophys. Res. Commun. 320 2004 1133 1138
36. K.K. Bowman, D.M. Sicard, J.M. Ford, and P.C. Hanawalt Reduced global genomic repair of ultraviolet light-induced cyclobutane pyrimidine dimers in simian virus 40-transformed human cells Mol. Carcinog. 29 2000 17 24
37. M. Protic-Sabljic, and K.H. Kraemer One pyrimidine dimer inactivates expression of a transfected gene in xeroderma pigmentosum cells Proc. Natl. Acad. Sci. U.S.A. 82 1985 6622 6626
38. I.P. Boszko, and A.J. Rainbow Removal of UV photoproducts from an adenovirus-encoded reporter gene following infection of unirradiated and UV-irradiated human fibroblasts Somat. Cell Mol. Genet. 25 1999 301 315
39. S.D. Kathe, G.P. Shen, and S.S. Wallace Single-stranded breaks in DNA but not oxidative DNA base damages block transcriptional elongation by RNA polymerase II in HeLa cell nuclear extracts. J. Biol. Chem. 279 2004 18511 18520 (erratum appears in J. Biol. Chem. 279 (June (26)) (2004) 27830)
40. M. Ljungman Repair of radiation-induced DNA strand breaks does not occur preferentially in transcriptionally active DNA Radiat. Res. 152 1999 444 449
41. G. Spivak The many faces of Cockayne syndrome Proc. Natl. Acad. Sci. U.S.A. 101 2004 15273 15274
42. S. Tornaletti, L. Maeda, R. Kolodner, and P. Hanawalt Effect of 8-oxoguanine on transcription elongation by T7 RNA polymerase and mammalian RNA polymerase II DNA Repair 4 2004 483 494
43. D. Brâegeon, Z.A. Doddridge, H.J. You, B. Weiss, and P.W. Doetsch Transcriptional mutagenesis induced by uracil and 8-oxoguanine in Escherichia coli Mol. Cell 12 4 2003 959 970
44. E. Larsen, K. Kwon, F. Coin, J.M. Egly, and A. Klungland Transcription activities at 8-oxoG lesions in DNA DNA repair 3 11 2004 1457 1468
45. M.P. Gallego, J. Armier, A. Sarasin, Transcription through 8-oxoguanine in DNA repair-deficient and DNA repair-proficient mouse embryonic fibroblasts is dependent upon promoter strength and sequence context, submitted for publication.