Genome-wide analysis of the expression profile of Saccharomyces cerevisiae in response to treatment with the plant isoflavone, wighteone, as a potential antifungal agent

Biotechnology Letters

Volumn 28, Issue 2, 2006, Pages 99-105

  Yin, Hongying ^a,b,c   Zhao, Yongchao ^a,b,c   Zhang, Yan ^a,b,c   Zhang, Hongwu ^d   Xu, Lizhen ^d   Zou, Zhongmei ^d   Yang, Weiping ^e   Cheng, Jing ^a,b,c   Zhou, Yuxiang ^a,b,c  

^a TSINGHUA UNIVERSITY   (China)

^b Tsinghua University   (China)

^c NATIONAL ENGINEERING RESEARCH CENTER FOR BEIJING BIOCHIP TECHNOLOGY   (China)

^d PEKING UNION MEDICAL COLLEGE   (China)

^e CapitalBio Corporation   (China)

Author keywords

Antifungal; Microarray; Plant extract; Saccharomyces cerevisiae; Wighteone

Indexed keywords

BIOTECHNOLOGY; GENES; SCREENING;

ANTIFUNGAL AGENTS; PLANT EXTRACT; WIGHTEONE;

YEAST;

ANTIFUNGAL AGENT; ISOFLAVONE DERIVATIVE; PLANT MEDICINAL PRODUCT;

ARTICLE; DRUG EFFECT; DRUG SCREENING; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENOME; GROWTH, DEVELOPMENT AND AGING; METABOLISM; SACCHAROMYCES CEREVISIAE;

ANTIFUNGAL AGENTS; DRUG EVALUATION; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, FUNGAL; GENOME, FUNGAL; ISOFLAVONES; PLANT PREPARATIONS; SACCHAROMYCES CEREVISIAE;

SACCHAROMYCES CEREVISIAE;

EID: 29244462799     PISSN: 01415492     EISSN: 15736776     Source Type: Journal    
DOI: 10.1007/s10529-005-4954-0     Document Type: Article

References (18)

1. AK Agarwal PD Rogers SR Baerson MR Jacob KS Barker JD Cleary LA Walker DG Nagle AM Clark 2003 Genome-wide expression profiling of the response to polyene, pyrimidine, azole, and echinocandin antifungal agents in Saccharomyces cerevisiae J. Biol. Chem. 278 34998 35015
2. G Bammert J Fostel 2000 Genome-wide expression patterns in Saccharomyces cerevisiae: comparison of drug treatments and genetic alterations affecting biosynthesis of ergosterol Antimicrob. Agents Chemother. 44 1255 1265
3. SM Barns DJ Lane ML Sogin C Bibeau WG Weisburg 1991 Evolutionary relationships among pathogenic Candida species and relatives J. Bacteriol. 173 2250 2255
4. JK Borchardt 2003 Traditional Chinese drug therapy Drug News Perspect. 16 698 702
5. J Cox R Chapman P Walter 1997 The unfolded protein response coordinates the production of endoplasmic reticulum protein and endoplasmic reticulum membrane Mol. Biol. Cell 8 1805 1814
6. KD Dahlquist N Salomonis K Vranizan SC Lawlor BR Conklin 2002 GenMAPP, a new tool for viewing and analyzing microarray data on biological pathways Nat. Genet. 31 19 20
7. FJM Detmers FC Lanfermeijer B Poolman 2001 Peptides and ATP binding cassette peptide transporters Res. Microbiol. 152 245 258
8. AH Groll SC Piscitelli TJ Walsh 1998 Clinical pharmacology of systemic antifungal agents: a comprehensive review of agents in clinical use, current investigational compounds, and putative targets for antifungal drug development Adv. Pharmacol. 44 343 500
9. TR Hughes 2002 Yeast and drug discovery Funct. Integr. Genomics 2 199 211
10. M-LT Lee FC Kuo GA Whitmore J Sklar 2000 Importance of replication in microarray gene expression studies: statistical methods and evidence from repetitive cDNA hybridizations Proc. Natl. Acad. Sci. USA 97 9834 9839
11. DJ Lockhart EA Winzeler 2000 Genomics, gene expression and DNA arrays Nature 405 827 836
12. MW Pfaffl 2001 A new mathematical model for relative quantification in real-time RT-PCR Nucl. Acids Res. 29 e45
13. M Pfaller V Chaturvedi A Espinel-Ingroff M Ghannoum 2002 National Committee for Clinical Laboratory Standards: Reference Method for Broth Dilution Antifungal Susceptibility Testing of Yeasts Approved Standard Second Edition M27-A2 NCCLS Wayne, Pennsylvania, USA
14. PD Rogers KS Barker 2002 Evaluation of differential gene expression in fluconazole-susceptible and -resistant isolates of Candida albicans by cDNA microarray analysis Antimicrob. Agents Chemother. 46 3412 3417
15. S Tenreiro PC Rosa CA Viegas I Sa-Correia 2000 Expression of the AZR1 gene (ORF YGR224w), encoding a plasma membrane transporter of the major facilitator superfamily, is required for adaptation to acetic acid and resistance to azoles in Saccharomyces cerevisiae Yeast 16 1469 1481
16. DL Yu XD Yang J Guo LZ Xu SL Yang 2000 Studies on chemical constituents of Erythrina arborescens Roxb J. Chinese Materia. Medica. 25 353 355
17. L Zhang Y Zhang Y Zhou S An J Cheng 2002a Response of gene expression in Saccharomyces cerevisiae to amphotericin B and nystatin measured by microarrays J. Antimicrob. Chemother. 49 905 915
18. L Zhang Y Zhang Y Zhou Y Zhao J Cheng 2002b Expression profiling of the response of Saccharomyces cerevisiae to 5-fluorocytosine using a DNA microarray Int. J. Antimicrob. Agents 20 444 450