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Volumn 43, Issue 6, 2006, Pages 559-569

T-cell epitope repertoire as predicted from human and viral genomes

Author keywords

Immunome; MHC I; Peptide; Repertoire; Self

Indexed keywords

EPITOPE; MAJOR HISTOCOMPATIBILITY ANTIGEN CLASS 1; VIRUS PROTEIN;

EID: 29044438397     PISSN: 01615890     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.molimm.2005.04.017     Document Type: Article
Times cited : (27)

References (29)
  • 1
    • 0034046248 scopus 로고    scopus 로고
    • Poor correspondence between predicted and experimental binding of peptides to class I MHC molecules
    • M.H. Andersen, L. Tan, I. Sondergaard, J. Zeuthen, T. Elliott, and J.S. Haurum Poor correspondence between predicted and experimental binding of peptides to class I MHC molecules Tissue Antigens 55 2000 519 531
    • (2000) Tissue Antigens , vol.55 , pp. 519-531
    • Andersen, M.H.1    Tan, L.2    Sondergaard, I.3    Zeuthen, J.4    Elliott, T.5    Haurum, J.S.6
  • 3
    • 0028097823 scopus 로고
    • Interferon gamma stimulation modulates the proteolytic activity and cleavage site preference of 20 S mouse proteasomes
    • B. Boes, H. Hengel, T. Ruppert, G. Multhaup, U. Koszinowski, and P. Kloetzel Interferon gamma stimulation modulates the proteolytic activity and cleavage site preference of 20 S mouse proteasomes J. Exp. Med. 179 1994 901 909
    • (1994) J. Exp. Med. , vol.179 , pp. 901-909
    • Boes, B.1    Hengel, H.2    Ruppert, T.3    Multhaup, G.4    Koszinowski, U.5    Kloetzel, P.6
  • 6
    • 0028817874 scopus 로고
    • The cleavage preference of the proteasome governs the yield of antigenic peptides
    • M. Eggers, B. Boes-Fabian, T. Ruppert, P. Kloetzel, and U. Koszinowski The cleavage preference of the proteasome governs the yield of antigenic peptides J. Exp. Med. 182 1995 1865 1870
    • (1995) J. Exp. Med. , vol.182 , pp. 1865-1870
    • Eggers, M.1    Boes-Fabian, B.2    Ruppert, T.3    Kloetzel, P.4    Koszinowski, U.5
  • 7
    • 0028970626 scopus 로고
    • The interferon-gamma-inducible 11 S regulator (PA28) and the LMP2/LMP7 subunits govern the peptide production by the 20 S proteasome in vitro
    • M. Groettrup, T. Ruppert, L. Kuehn, M. Seeger, S. Standera, U. Koszinowski, and P. Kloetzel The interferon-gamma-inducible 11 S regulator (PA28) and the LMP2/LMP7 subunits govern the peptide production by the 20 S proteasome in vitro J. Biol. Chem. 270 1995 23808 23815 http://bimas.cit.nih. gov/
    • (1995) J. Biol. Chem. , vol.270 , pp. 23808-23815
    • Groettrup, M.1    Ruppert, T.2    Kuehn, L.3    Seeger, M.4    Standera, S.5    Koszinowski, U.6    Kloetzel, P.7
  • 8
    • 0029019122 scopus 로고
    • Mutational analysis of the herpes simplex virus virion host shutoff protein: Evidence that vhs functions in the absence of other viral proteins
    • F.E. Jones, C.A. Smibert, and J.R. Smiley Mutational analysis of the herpes simplex virus virion host shutoff protein: evidence that vhs functions in the absence of other viral proteins J. Virol. 69 1995 4863 4871
    • (1995) J. Virol. , vol.69 , pp. 4863-4871
    • Jones, F.E.1    Smibert, C.A.2    Smiley, J.R.3
  • 9
    • 0004252170 scopus 로고
    • Academic Press San Diego, CA, USA
    • R. Lechler HLA and Disease 1994 Academic Press San Diego, CA, USA
    • (1994) HLA and Disease
    • Lechler, R.1
  • 10
    • 0028234201 scopus 로고
    • Sequential degradation of the neuropeptide gonadotropin-releasing hormone by the 20 S granulosa cell proteasomes
    • D. Leibovitz, Y. Koch, F. Pitzer, N. Fridkin, A. Dantes, W. Baumeister, and A. Amsterdam Sequential degradation of the neuropeptide gonadotropin- releasing hormone by the 20 S granulosa cell proteasomes FEBS Lett. 346 1994 203 206
    • (1994) FEBS Lett. , vol.346 , pp. 203-206
    • Leibovitz, D.1    Koch, Y.2    Pitzer, F.3    Fridkin, N.4    Dantes, A.5    Baumeister, W.6    Amsterdam, A.7
  • 11
    • 29044442885 scopus 로고    scopus 로고
    • Score for proteasomal peptide production probability
    • Louzoun, Y., Vider, T., 2004. Score for proteasomal peptide production probability. Immunology 1.
    • (2004) Immunology , vol.1
    • Louzoun, Y.1    Vider, T.2
  • 12
    • 0029978646 scopus 로고    scopus 로고
    • Structure, function, and evolution of adenovirus-associated RNA: A phylogenetic approach
    • Y. Ma, and M.B. Mathews Structure, function, and evolution of adenovirus-associated RNA: a phylogenetic approach J. Virol. 70 1996 5083 5099
    • (1996) J. Virol. , vol.70 , pp. 5083-5099
    • Ma, Y.1    Mathews, M.B.2
  • 14
    • 0032171644 scopus 로고    scopus 로고
    • A very high level of crossreactivity is an essential feature of the T-cell receptor
    • D. Mason A very high level of crossreactivity is an essential feature of the T-cell receptor Immunol. Today 19 1998 395 404
    • (1998) Immunol. Today , vol.19 , pp. 395-404
    • Mason, D.1
  • 15
    • 0028914853 scopus 로고
    • Molecular phylogeny and evolutionary timescale for the family of mammalian herpesviruses
    • D.J. McGeoch, S. Cook, A. Dolan, F.E. Jamieson, and E.A. Telford Molecular phylogeny and evolutionary timescale for the family of mammalian herpesviruses J. Mol. Biol. 247 1995 443 458
    • (1995) J. Mol. Biol. , vol.247 , pp. 443-458
    • McGeoch, D.J.1    Cook, S.2    Dolan, A.3    Jamieson, F.E.4    Telford, E.A.5
  • 16
    • 0030880547 scopus 로고    scopus 로고
    • Intermediates in the formation of mouse 20 S proteasomes: Implications for the assembly of precursor beta subunits
    • D. Nandi, E. Woodward, D.B. Ginsburg, and J.J. Monaco Intermediates in the formation of mouse 20 S proteasomes: implications for the assembly of precursor beta subunits EMBO J. 16 1997 5363 5375
    • (1997) EMBO J. , vol.16 , pp. 5363-5375
    • Nandi, D.1    Woodward, E.2    Ginsburg, D.B.3    Monaco, J.J.4
  • 18
    • 0029781734 scopus 로고    scopus 로고
    • The proteolytic fragments generated by vertebrate proteasomes: Structural relationships to major histocompatibility complex class I binding peptides
    • G. Niedermann, G. King, S. Butz, U. Birsner, R. Grimm, J. Shabanowitz, D.F. Hunt, and K. Eichmann The proteolytic fragments generated by vertebrate proteasomes: structural relationships to major histocompatibility complex class I binding peptides Proc. Natl. Acad. Sci. U.S.A. 93 1996 8572 8577
    • (1996) Proc. Natl. Acad. Sci. U.S.A. , vol.93 , pp. 8572-8577
    • Niedermann, G.1    King, G.2    Butz, S.3    Birsner, U.4    Grimm, R.5    Shabanowitz, J.6    Hunt, D.F.7    Eichmann, K.8
  • 20
    • 0041589474 scopus 로고    scopus 로고
    • Identifying MHC class I epitopes by predicting the TAP transport efficiency of epitope precursors
    • B. Peters, S. Bulik, R. Tampe, P.M.V. Endert, and H.G. Holzhutter Identifying MHC class I epitopes by predicting the TAP transport efficiency of epitope precursors J. Immunol. 171 2003 1741 1749
    • (2003) J. Immunol. , vol.171 , pp. 1741-1749
    • Peters, B.1    Bulik, S.2    Tampe, R.3    Endert, P.M.V.4    Holzhutter, H.G.5
  • 23
    • 0022374263 scopus 로고
    • Purification of a liver alkaline protease which degrades oxidatively modified glutamine synthetase. Characterization as a high molecular weight cysteine proteinase
    • A.J. Rivett Purification of a liver alkaline protease which degrades oxidatively modified glutamine synthetase. Characterization as a high molecular weight cysteine proteinase J. Biol. Chem. 260 1985 12600 12606
    • (1985) J. Biol. Chem. , vol.260 , pp. 12600-12606
    • Rivett, A.J.1
  • 24
    • 0035161548 scopus 로고    scopus 로고
    • IMGT/HLA database - A sequence database for the human major histocompatibility complex
    • J. Robinson, M.J. Waller, P. Parham, J.G. Bodmer, and S.G.E. Marsh IMGT/HLA database - a sequence database for the human major histocompatibility complex Nucleic Acids Res. 29 2001 210 213
    • (2001) Nucleic Acids Res. , vol.29 , pp. 210-213
    • Robinson, J.1    Waller, M.J.2    Parham, P.3    Bodmer, J.G.4    Marsh, S.G.E.5
  • 29
    • 0028070376 scopus 로고
    • Existence of a molecular ruler in proteasomes suggested by analysis of degradation products
    • T. Wenzel, C. Eckerskorn, F. Lottspeich, and W. Baumeister Existence of a molecular ruler in proteasomes suggested by analysis of degradation products FEBS Lett. 349 1994 205 209
    • (1994) FEBS Lett. , vol.349 , pp. 205-209
    • Wenzel, T.1    Eckerskorn, C.2    Lottspeich, F.3    Baumeister, W.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.