An interdisciplinary approach to assess the functional diversity of free-living microscopic eukaryotes

Aquatic Microbial Ecology

Volumn 41, Issue 1, 2005, Pages 67-77

  Lowe, C D ^a   Kemp, S J ^a   Montagnes, D J S ^a  

^a UNIVERSITY OF LIVERPOOL   (United Kingdom)

Author keywords

Brachionus plicatilis; Na + K+ ATPase; Osmoregulation; Phylogeography; Salinity

Indexed keywords

BRACHIONUS PLICATILIS; EUKARYOTA; ROTIFERA;

EID: 28944447114     PISSN: 09483055     EISSN: None     Source Type: Journal    
DOI: 10.3354/ame041067     Document Type: Article

References (45)

1. Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25:3389-3402
2. Avise JC (1994) Molecular markers, natural history and evolution. Chapman & Hall, London
3. Axelsen KB, Palmgren MG (1998) Evolution of substrate specificities in the P-type ATPase superfamily. J Mol Evol 46:84-101
4. Baas Becking LGM (1934) Geobiologie of inleidung tot de milieukunde. WP van Stockum & Zoon, Den Haag
5. Bradford MM (1976) A rapid and sensitive method for the quantification of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 151:369-374
6. Ciros-Perez J, Carmona MJ, Serra M (2001) Resource competition between sympatric sibling rotifer species. Limnol Oceanogr 46:1511-1523
7. Crnokrak P, Merilä J (2002) Genetic population divergence: markers and traits. Trends Ecol Evol 17:501
8. De Meester L, Gomez A, Okamura B, Schwenk K (2002) The Monopolization Hypothesis and the dispersal-gene flow paradox in aquatic organisms. Acta Oecol 23:121-135
9. Derry AM, Hebert PDN, Prepas EE (2003a) Evolution of rotifers in saline and subsaline lakes: a molecular phylogenetic approach. Limnol Oceanogr 48:675-685
10. Derry AM, Prepas EE, Hebert PDN (2003b) A comparison of zooplankton communities in saline lake water with variable anion composition. Hydrobiologia 505:199-215
11. Fenchel T (2003) Biogeography for bacteria. Science 301:925-926
12. Fenchel T, Finlay BJ (2004) The ubiquity of small species: patterns of local and global diversity. BioScience 54:777-784
13. Fenchel T, Esteban GF, Finlay BJ (1997) Local versus global diversity of microorganisms: cryptic diversity of ciliated protozoa. Oikos 80:220-225
14. Ferris MJ, Palenik B (1998) Niche adaptation in ocean cyanobacteria. Nature 396:226-228
15. Finlay BJ (2004) Protist taxonomy: an ecological perspective. Phil Trans R Soc Lond 359:599-610
16. Fisher M, Gokhman I, Pick U, Zamir A (1996) A salt-resistant plasma membrane carbonic anhydrase is induced by salt in Dunaliella salina. J Biol Chem 271:17718-17723
17. Gomez A, Temprano M, Serra M (1995) Ecological genetics of a cyclical parthenogen in temporary habitats. J Evol Biol 8:601-622
18. Gomez A, Carmona MJ, Serra M (1997) Ecological factors affecting gene flow in the Brachionus plicatilis complex (Rotifera). Oecologia 111:350-356
19. Gomez A, Carvalho GR, Lunt DH (2000) Phylogeography and regional endemism of a passively dispersing zooplankter: mitochondrial DNA variation in rotifer resting egg banks. Phil Trans R Soc Lond B 267:2189-2197
20. Gomez A, Serra M, Carvalho GR, Lunt DH (2002) Speciation in ancient cryptic species complexes: evidence from the molecular phylogeny of Brachionus plicatilis (Rotifera). Evolution 56:1431-1444
21. Hendry AP (2002) Genetic population divergence: markers and traits. Trends Ecol Evol 17:502
22. + ATPase activity and transepithelial potential difference in the brine shrimp Artemia salina. J Exp Biol 151:279-296
23. Knowlton N (2000) Molecular genetic analysis of species boundaries in the sea. Hydrobiologia 420:73-90
24. LaJeunesse TC (2001) Investigating the biodiversity, ecology, and phylogeny of endosymbiotic dinoflagellates in the genus Symbiodinium using the ITS region: in search of a species level marker. J Phycol 37:866-880
25. +-ATPase. J Biol Chem 269:19659-19662
26. Lowe CD, Bates AD, Kemp SJ, Montagnes DJS (2005a) Evidence that the rotifer Brachionus plicatilis is not an osmoconformer. Mar Biol 146:923-929
27. Lowe CD, Day A, Kemp SJ, Montagnes DJS (2005b) There are high levels of functional and genetic diversity in Oxyrrhis marina. J Eukaryot Microbiol 52:250-257
28. Lubzens E, Zmora O, Barr Y (2001) Biotechnology and aquaculture of rotifers. Hydrobiologia 446/447:337-353
29. +-ATPase in the lobster Hommerus gammarus acclimated to dilute seawater. J Exp Mar Biol Ecol 234:291-304
30. McKay JK, Latta RG (2002) Adaptive population divergence: markers, QTL and traits. Trends Ecol Evol 17:285-291
31. Miracle MR, Serra M (1989) Salinity and temperature influence in rotifer life history characteristics. Hydrobiologia 186/187:81-102
32. Moon-van der Staay SY, De Wachter R, Vaulot D (2001) Oceanic 18S rDNA sequences from picoplankton reveals unexpected eukaryotic diversity. Nature 409:607-610
33. Moore LR, Rocap G, Chisholm SW (1998) Physiology and molecular phylogeny of coexisting Prochlorococcus ecotypes. Nature 393:464-467
34. Ortells R, Gomez A, Serra M (2003) Coexistence of cryptic rotifer species: ecological and genetic characterisation of Brachionus plicatilis. Freshw Biol 48:2194-2202
35. Palys T, Nakamura LK, Cohan FM (1997) Discovery and classification of ecological diversity in the bacterial world: the role of DNA sequence data. Int J Syst Bacteriol 47:1145-1156
36. Papke RT, Ramsing NB, Bateson MM, Ward DM (2003) Geographical isolation in hot spring cyanobacteria. Environ Microbiol 5:650-659
37. Pfaffl MW (2001) A new mathematical model for relative quantification in real-time PCR. Nucleic Acids Res 29:2002-2007
38. Rose TM, Schultz ER, Henikoff JG, Pietrokovski S, McCallum C, Henikoff S (1998) Consensus-degenerate hybrid oligonucleotide primers for amplification of distantly related sequences. Nucleic Acids Res 26:1628-1635
39. Rowan R (1998) Diversity and ecology of zooxanthallae on coral reefs. J Phycol 43:407-417
40. Saldarriaga JF, McEwan ML, Fast NM, Taylor FJR, Keeling PJ (2003) Multiple protein phylogenies show that Oxyrrhis marina and Perkinsus marinus are early branches of the dinoflagellate lineage. Int J Syst Evol Microbiol 53:355-365
41. Sambrook J, Russell DW (2001) Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory Press, New York
42. Walker KF (1981) A synopsis of ecological information on the saline lake rotifer Brachionus plicatilis Muller 1786. Hydrobiologia 81:159-167
43. Whitaker RJ, Grogan DW, Taylor JW (2003) Geographic barriers isolate endemic populations of hyperthermophilic Archaea. Science 301:976-978
44. Wilkinson DM (2003) Dispersal, cladistics and the nature of biogeography. J Biogeogr 30:1779-1780
45. Zar JH (1999) Biostatistical analysis. Prentice Hall International, London