Analysis by RAPD of the genetic structure of Astyanax altiparanae (Pisces, Characiformes) in reservoirs on the Paranapanema River, Brazil

Genetics and Molecular Biology

Volumn 27, Issue 3, 2004, Pages 355-362

  Leuzzi, Maria Sueli Papa ^a   de Almeida, Fernanda Simões ^a   Orsi, Mário Luís ^a   Sodré, Leda Maria Koelblinger ^a  

^a STATE UNIVERSITY OF LONDRINA   (Brazil)

Author keywords

Astyanax altiparanae; Fish; Genetic conservation; Genetic structure; RAPD

Indexed keywords

ARTICLE; ASTYANAX ALTIPARANAE; BRAZIL; CONTROLLED STUDY; DNA EXTRACTION; ENVIRONMENTAL RECOLONIZATION; FISH; GENE CLUSTER; GENETIC ANALYSIS; GENETIC CONSERVATION; GENETIC VARIABILITY; NONHUMAN; PHYLOGENETIC TREE; RANDOM AMPLIFIED POLYMORPHIC DNA; RIVER; WATER SUPPLY;

ASTYANAX ALTIPARANAE; CHARACIDAE; CHARACIFORMES; PISCES; TETRAGONOPTERINAE;

EID: 28444461021     PISSN: 14154757     EISSN: 16784685     Source Type: Journal    
DOI: 10.1590/S1415-47572004000300009     Document Type: Article

References (36)

1. Agostinho AA, Julio Jr HF and Borghetti JR (1992) Considerações sobre os impactos dos represamentos na ictiofauna e medidas para sua atenuação. Um estudo de caso: Reservatório de Itaipu. Rev Unimar 14:89-107.
2. Almeida FS, Fungaro MHP and Sodré LMK (2001) RAPD and isoenzyme analysis of genetic variability in three allied species of catfish (Siluriformes: Pimelodidae) from the Tibagi river, Brazil. J Zool Lond 253:113-120.
3. Almeida FS, Sodré LMK and Contel EPB (2003) Population structure analysis of Pimelodus maculatus (Pisces, Siluriformes) from the Tietê and Paranapanema rivers (Brazil). Genet Mol Biol 26:301-305.
4. Barman HK, Barat A, Yadav BM, Banerjee S, Meher PM, Reddy PVGK and Jana RK (2003) Genetic variation between four species of Indian major carps as revealed by random amplified polymorphic DNA assay. Aquaculture 217:115-123.
5. Bártfai R, Egedi S, Yue GH, Kovács B, Urbányi B, Tamás G, Horváth L and Orbán L (2003) Genetics analysis of two common carp broodstocks by RAPD and microsatellite markers. Aquaculture 219:157-167.
6. Black, B (1997) RAPDFST 4.0.1 - A FORTRAN Program to estimate F (ST) and effective migration rates among subpopulations using RAPS-PCR files. Colorado State University.
7. Callejas SC and Ochando MD (1998) Identification of Spanish Barbel species using the RAPD technique. J Fish Biol 53:208-215.
8. Carvalho GR (1993) Evolutionary aspects of fish distribution: Genetic variability and adaptation. J Fish Biol 43:53-73.
9. Chiari L and Sodré LMK (2001) Study of eight species of the Anostomidae family (Pisces, Characiformes) by RAPD analysis. Acta Scient 23:445-451.
10. Dergam JA, Suzuki HJ, Shibatta AO, Duboc LF, Júlio Jr OF, Giuliano-Caetano L and Black IV WC (1998) Molecular biogeography of the neotropical fish Hoplias malabaricus (Erythrinidae: Characiformes) in the Iguaçu, Tibagi and Paraná rivers. Genet Mot Biol 21:493-496.
11. Garutti V (1995) Revisão taxonômica dos Astyanax (Pisces, Characidae), com mancha umeral ovalada e mancha no pedúnculo caudal, estendendo-se à extremidade dos raios caudais medianos, das bacias do Paraná, São Francisco e Amazônica. Livre-Docência Thesis, Universidade Estadual Paulista, São José do Rio Preto.
12. Garutti V and Britski HA (2000). Descrição de uma espécie nova de Astyanax altiparanae (Teleostei, Characidae) da bacia do alto do rio Paraná e considerações sobre as demais espécies do gênero na bacia. Comum. Mus Ciênc Tecnol PUCRS 13:65-88.
13. Godinho HP and Godinho AL (1994). Ecology and conservation of fish in southeastern Brazilian river basins submitted to hydroelectric impoundments. Acta Limn Brasil 5:187-197.
14. Hadrys H, Balick M and Schierwater B (1992) Applications of random amplified polymorphic DNA (RAPD) in molecular ecology. Mol Ecol 1:55-63.
15. Haig SM (1998) Molecular contributions to conservation. Ecology 79:413-425.
16. Hartl DL and Clark AG (1997) Principles of Population Genetics. Sinauer, Canadá, 542 pp.
17. Hatanaka T and Galetti Jr PM (2003) RAPD markers indicate the occurrence of structured populations in a migratory freshwater fish species. Genet Mol Biol 26:19-25.
18. Jayasankar P and Dharmaliangam K (1997) Potential application of RAPD and RAHM markers in genome analysis of scombroid fishes. Curr Sci 72:383-390.
19. Leberg PL (1990) Influence of genetic variability on population growth: Implications for conservation. J Fish Biol 37:193-195.
20. Lynch M and Milligan BG (1994) Analysis of population structure with RAPD markers. Mol Ecol 3:91-99.
21. Miller MP (1997) Tools for population genetic analyses TFPGA 13: A windows program for the analysis of allozyme and molecular population genetic data. Department of Biological Sciences, Northern Arizona University. MPM2ψan. ucc.nau.edu, Computer software distributed by author.
22. Moysés CB and Almeida-Toledo LF (2002) Restriction fragment length polymorphisms of mitochondrial DNA among five freshwater fish species of the genus Astyanax (Pisces, Characidae). Genet Mol Biol 25:401-408.
23. Nei M (1978) Estimation of average heterozigosity and genetic distance from a small number of individual. Genetics 89:583-590.
24. Oliveira C (2001) Conservação Genética em Peixes. Bol Soc Bras Ictiol 63:5-6.
25. Orsi ML (2001) Biologia populacional de Astyanax altiparanae Garutti & Britski, 2000 (Teleostei, Characidae) da bacia do rio Paranapanema (baixo do rio Tibagi). Master Dissertation, Universidade Estadual Paulista, Botucatu.
26. Prioli SMAP, Prioli AJ, Júlio Jr HF, Pavanelli CS, Oliveira AV, Carrer H, Carraro DM anf Prioli LM (2002) Identification of Astyanax altiparanae (Teleostei, Characidae) in the Iguaçu River, Brazil, based on mitochondrial DNA and RAPD markers. Genet Mol Biol 25:421-430.
27. Rohlf FJ (1992) NTSYS-pc. Numerical taxonomy and multivariate analysis system. Exeter software, Applied Bioestatistics, N.Y., 225 pp.
28. Ryman N, Utter F and Laikre L (1995) Protection of intraspecific biodiversity of exploited fishes. Review Fish Biol Fish 5:417-446.
29. Sekine ES, Prioli AJ, Prioli SMAP and Júlio JR HF (2002) Genetic differentiation among populations of Pseudoplatystoma corruscans (Agassiz, 1892) (Osteichthyes, Pimelodidae) isolated by the Guaíra Falls in the Paraná River. Acta Scient 24:507-512.
30. Slatkin M (1994) Gene flow and population structure. In: Real, LA (ed) Ecological Genetics. 1st edition. Princeton University Press, pp 3-17.
31. Solé-Cava AM (2001) Biodiversidade molecular e genética da conservação. In: Matioli SR (ed) Biologia Molecular e Evolução. 1st edition. Holos, Ribeirão Preto, pp 172-192.
32. Toledo-Filho SA, Almeida-Toledo LF, Foresti F, Galhardo E and Donola E (1992) Conservação genética de peixes em projetos de repovoamento e reservatórios. Cadernos de Ictiogenética 1. Universidade de São Paulo, São Paulo.
33. Vrijenhoek RC (1998) Conservation genetics of freshwater fish. J Fish Biol 53:394-412.
34. Welsh J and McClelland M (1990) Fingerprinting genomes using PCR with arbitrary primers. Nucl Acids Res 18:7213-7218.
35. Williams JGK, Kubelik AR, Livak KJ, Rafaeski JA and Tingey S (1990) DNA polymorphism amplified by arbitrary primers are useful as genetic markers. Nucl Acids Res 18:6531-6535.
36. Yeh FC, Yang R and Boyle T (1999) POPGENE version 3.1: Microsoft Windows-based freeware for population genetic analysis. University of Albert and Center for International Forestry Research.