Gene nomenclature by default, or BLASTing to Babel

Human Genomics

Volumn 2, Issue 3, 2005, Pages 196-201

  Nelson, David R ^a  

^a UNIVERSITY OF TENNESSEE HEALTH SCIENCE CENTER   (United States)

Author keywords

Cytochrome P450; Gene nomenclature; Mouse genome; Orthologue; Rat genome

Indexed keywords

CYTOCHROME P450;

ANIMAL GENETICS; ARTICLE; COMPUTER PROGRAM; GENE ASSIGNMENT; INTERNET; MAMMALIAN GENETICS; MOUSE; MULTIGENE FAMILY; NOMENCLATURE; NONHUMAN; ORTHOLOGY; PARALOGY; RAT;

ANIMALIA; MAMMALIA;

EID: 28044443659     PISSN: 14739542     EISSN: 14797364     Source Type: Journal    
DOI: 10.1186/1479-7364-2-3-196     Document Type: Article

References (10)

1. Rat Genome Sequencing Project Consortium. (2004), 'Genome sequence of the Brown Norway rat yields insights into mammalian evolution', Nature Vol. 428, pp. 493-521.
2. Fujii-Kuriyama, Y., Mizukami, Y., Kawajiri, K. et al. (1982), 'Primary structure of a cytochrome P-450: Coding nucleotide sequence of phenobarbital-inducible cytochrome P-450 cDNA from rat liver', Proc. Natl. Acad. Sci. USA Vol. 79, pp. 2793-2797.
3. 3-450 cDNA nucleotide and amino acid sequences', J. Biol. Chem. Vol. 259, pp. 10705-10713.
4. Kimura, S., Gonzalez, F.J. and Nebert, D.W. (1984), 'Mouse cytochrome P3-450: Complete cDNA and amino acid sequence', Nucleic Acids Res. Vol. 12, pp. 2917-2928.
5. Nebert, D.W. Adesnik, M., Coon, M.J. et al. (1987), 'The P450 gene superfamily: Recommended nomenclature', DNA Vol. 6, pp. 1-11.
6. Nelson, D.R., Kamataki, T., Waxman, D.J. et al. (1993), 'The P450 superfamily: Update on new sequences, gene mapping, accession numbers, early trivial names of enzymes, and nomenclature', DNA Cell Biol. Vol. 12, pp. 1-51.
7. Nelson, D.R., Koymans, L., Kamataki, T. et al. (1996), 'P450 superfamily: Update on new sequences, gene mapping, accession numbers and nomenclature', Pharmacogenetics Vol. 6, pp. 1-42.
8. Nelson, D.R., Zeldin, D., Hoffman, S. et al. (2004), 'Comparison of cytochrome P450 (CYP) genes from the mouse and human genomes including nomenclature recommendations for genes, pseudogenes, and alternative-splice variants', Pharmacogenetics Vol. 14, pp. 1-18.
9. The Cytochrome P450 homepage available at http://drnelson.utmem.edu/cytochromeP450.html. (Last accessed 30th March, 2005).
10. Mouse Genome Sequencing Consortium. (2002), 'Initial sequencing and comparative analysis of the mouse genome', Nature Vol. 420, pp. 520-562.