The players in a mutualistic symbiosis: Insects, bacteria, viruses, and virulence genes

Proceedings of the National Academy of Sciences of the United States of America

Volumn 102, Issue 47, 2005, Pages 16919-16926

  Moran, Nancy A ^a   Degnan, Patrick H ^a   Santos, Scott R ^b,c   Dunbar, Helen E ^a   Ochman, Howard ^b  

^a University of Arizona   (United States)

^b UNIVERSITY OF ARIZONA   (United States)

^c AUBURN UNIVERSITY   (United States)

Author keywords

Acrythosiphon pisum; Aphid; Enterobacteriaceae; Hamiltonella defensa; Lamboid phage

Indexed keywords

CYTOLETHAL DISTENDING TOXIN; DNA; SHIGA TOXIN; TOXIN; UNCLASSIFIED DRUG;

APHID; ARTICLE; BACTERIOPHAGE; BACTERIUM; BUCHNERA; DNA ISOLATION; ENDOSYMBIONT; GENE; GENE AMPLIFICATION; GENOME; HAMILTONELLA DEFENSA; HEMOLYMPH; HOST RESISTANCE; INSECT; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; STX GENE; SYMBIONT; SYMBIOSIS; VIRULENCE; VIRUS;

AMINO ACID SEQUENCE; ANIMALS; APHIDS; BACTERIAL TOXINS; BUCHNERA; CHROMOSOMES, BACTERIAL; ENTEROBACTERIACEAE; FEMALE; HUMANS; INSECT VIRUSES; MOLECULAR SEQUENCE DATA; SEQUENCE ANALYSIS, DNA; SEQUENCE ANALYSIS, PROTEIN; SYMBIOSIS; VIRULENCE;

ACRYTHOSIPHON PISUM; ACYRTHOSIPHON PISUM; APHIDIDAE; BACTERIA (MICROORGANISMS); BUCHNERA (PROTEOBACTERIA); ENTEROBACTERIACEAE; EUKARYOTA; HEXAPODA; INSECTA; MAMMALIA;

EID: 28044435355     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.0507029102     Document Type: Article

References (65)

1. Moran, N. A., Russell, J. A., Fukatsu, T. & Koga, R. (2005) Appl. Environ. Microbiol. 71, 3302-3310.
2. Sandström, J. P., Russell, J. A., White, J. P. & Moran, N. A. (2001) Mol. Ecol. 10, 217-228.
3. Darby, A. C., Birkle, L. M., Turner, S. L. & Douglas, A. E. (2001) FEMS Microbiol. Ecol. 36, 43-50.
4. Russell, J. A., LaTorre, A. L., Sabater-Muñoz, B., Moya, A. & Moran, N. A. (2003) Mol. Ecol. 12, 1061-1075.
5. Haynes, S., Darby, A. C., Daniell, T. J., Webster, G., Van Veen, F. J., Godfray, H. C., Prosser, J. I. & Douglas, A. E. (2003) Appl. Environ. Microbiol. 69, 7216-7223.
6. Oliver, K., Russell, J., Moran, N. & Hunter, M. (2003) Proc. Natl. Acad. Sci. USA 100, 1803-1807.
7. van der Wilk, F., Dullemans, A. M., Verbeek, M. & van den Heuvel, J. F. (1999) Virology 262, 104-113.
8. Clark, A. J., Inwood, W., Cloutier, T. & Dhillon, T. S. (2001) J. Mol. Biol. 311, 657-679.
9. Thao, M. L., Clark, M., Baumann, L., Brennan, E. B., Moran, N. A. & Baumann, P. (2000) Curr. Microbiol. 41, 300-304.
10. Thao, M. L., Gullan, P. J. & Baumann, P. (2002) Appl. Environ. Microbiol. 68, 3190-3197.
11. Thao, M. L. & Baumann, P. (2004) Curr. Microbiol. 48, 140-144.
12. Lefevre, C., Charles, H., Valuer, A., Delobel, B., Farrell, B. & Heddi, A. (2004) Mol. Biol. Evol. 21, 965-973.
13. Parkhill, J., Wren, B. W., Thomson, N. R., Titball, R. W., Holden, M. T. G., Prentice, M. B., Sebaihia, M., James, K. D., Churcher, C., Mungall, K. L., et al. (2001) Nature 413, 523-527.
14. Duchaud, E., Rusniok, C., Frangeul, L., Buchrieser, C., Taourit, S., Bocs, S., Boursaux-Eude, C., Chandler, M., Dassa, E., Derose, R., et al. (2003) Nat. Biotechnol. 21, 1307-1313.
15. Dale, C., Young, S. A., Haydon, D. T. & Welburn, S. C. (2001) Proc. Natl. Acad. Sci. USA 98, 1883-1888.
16. Dale, C., Jones, T. & Pontes, M. (2005) Mol. Biol. Evol. 22, 758-766.
17. Dale, C., Plague, G., Wang, B., Ochman, H. & Moran, N. A. (2002) Proc. Natl. Acad. Sci. USA 99, 12397-12402.
18. Brugirard-Ricaud, K., Givaudan, A., Parkhill, J., Boemare, N., Kunst, F., Zumbihl, R. & Duchaud, E. (2004) J. Bacteriol. 186, 4376-4381.
19. Groisman, E. A. & Ochman, H. (1993) EMBO J. 12, 3779-3787.
20. Johansen, B. K., Wasteson, Y., Granum, P. E. & Brynestad, S. (2001) Microbiology 147, 1929-1936.
21. Wagner, P. L. & Waldor, M. K. (2002) Infect. Immun. 70, 3985-3993.
22. Shigenobu, S., Watanabe, H., Hattori, M., Sakaki, Y. & Ishikawa, H. (2000) Nature 407, 81-86.
23. Tamas, I., Klasson, L., Näslund, K., Eriksson, A. S., Wernegreen, J. J., Sandström, J. P., Moran, N. A. & Andersson, S. G. E. (2002) Science 296, 2376-2379.
24. van Ham, R. C., Kamerbeek, J., Palacios, C., Rausell, C., Abascal, F., Bastolla, U., Fernández, J.M., Jiménez, L., Postigo, M., Silva, F. J., et al. (2003) Proc. Natl. Acad. Sci. USA 100, 581-586.
25. Wilcox, J. L., Dunbar, H. E., Wolfinger, R. D. & Moran, N. A. (2003) Mol. Microbiol. 48, 1491-1500.
26. Zientz, E., Dandekar, T. & Gross, R. (2004) Microbiol. Mol. Biol. Rev. 68, 745-770.
27. Wu, M., Sun, L. V., Vamathevan, J., Riegler, M., Deboy, R., Brownlie, J. C., McGraw, E. A., Martin, W., Esser, C., Ahmadinejad, N., et al. (2004) PLoS Biol. 2, e69.
28. Tsuchida, T., Koga, R., Meng, X. Y., Matsumoto, T. & Fukatsu, T. (2005) Microb. Ecol. 49, 126-133.
29. Sutton, G., White, O., Adams, M. & Kerlavage, A. (1995) Genome Sci. Technol. 1, 9-19.
30. Gordon, D., Abajian, C. & Green, P. (1998) Genome Res. 8, 195-202.
31. Delcher, A. L., Harmon, D., Kasif, S., White, O. & Salzberg, S. L. (1999) Nucleic Acids Res. 27, 4636-4641.
32. Moran, N. A., Dunbar, H. E. & Wilcox, J. L. (2005) J. Bacteriol. 187, 4229-4237.
33. Moran, N. A., Dale, C., Dunbar, H., Smith, W. & Ochman, H. (2003) Environ. Microbiol. 5, 116-126.
34. Dean, F. B., Nelson, J. R., Giesler, T. L. & Lasken, R. S. (2001) Genome Res. 11, 1095-1099.
35. Dean, F. B., Hosono, S., Fang, L., Wu, X., Faruqi, A. F., Bray-Ward, P., Sun, Z., Zong, Q., Du, Y., Du, J., et al. (2002) Proc. Natl. Acad. Sci. USA 99, 5261-5266.
36. Detter, J. C., Jett, J. M., Lucas, S. M., Dalin, E., Arellano, A. R., Wang, M., Nelson, J. R., Chapman, J., Lou, Y., Rokhsar, D., et al. (2002) Genomics 80, 691-698.
37. Akman, L., Yamashita, A., Watanabe, H., Oshima, K., Shiba, T., Hattori, M. & Aksoy, S. (2002) Nat. Genet. 32, 402-407.
38. Gil, R., Silva, F. J., Zientz, E., Delmotte, F., González- Candelas, F., Latorre, A., Rausell, C., Kamerbeek, J., Gadau, J., Holldöbler, B., et al. (2003) Proc. Natl. Acad. Sci. USA 100, 9388-9393.
39. Clark, M. A., Baumann, L., Thao, M. L., Moran, N. A. & Baumann, P. (2001) J. Bacteriol. 183, 1852-1861.
40. Moran, N. A. & Plague, G. R. (2004) Curr. Opin. Genet. Dev. 14, 627-633.
41. Lara-Tejero, M. & Galán, J. E. (2000) Science 290, 354-357.
42. Pickett, C. L. & Whitehouse, C. A. (1999) Trends Microbiol. 7, 292-297.
43. Lara-Tejero, M. & Galán, J. E. (2002) Trends Microbiol. 10, 147-152.
44. Acheson, D. W. & Keusch, G. (1996) Am. Soc. Microbiol. News 62, 302.
45. Galan, J. E. (2001) Annu. Rev. Cell Dev. Biol. 17, 53-86.
46. Hueck, C. J. (1998) Microbiol. Mol. Biol. Rev. 62, 379-433.
47. Galán, J. E. & Collmer, A. (1999) Science 284, 1322-1328.
48. Haghjoo, E. & Galán, J. E. (2004) Proc. Natl. Acad. Sci. USA 101, 4614-4619.
49. Wagner, P. L., Neely, M. N., Zhang, X., Acheson, D. W. K., Waldor, M. K. & Friedman, D. I. (2001) J. Bacteriol. 183, 2081-2085.
50. Wagner, P. L., Livny, J., Neely, M. N., Acheson, D. W. K., Friedman, D. I. & Waldor, M. K. (2002) Mol. Microbiol. 44, 957-970.
51. Tyler, J. S., Mills, M. J. & Friedman, D. I. (2004) J. Bacteriol. 186, 7670-7679.
52. Livny, J. & Friedman, D. I. (2004) Mol. Microbiol. 51, 1691-1704.
53. Cardinale, B. J., Harvey, C. T., Gross, K. & Ives, A. R. (2003) Ecol. Lett. 6, 857-865.
54. Ferrari, J., Muller, C. B., Kraaijeveld, A. R. & Godfray, H. J. C. (2001) Evolution (Lawrence, Kans.) 55, 1805-1814.
55. Oliver, K. A., Moran, N. A. & Hunter, M. S. (2005) Proc. Natl. Acad. Sci. USA 102, 12795-12800.
56. Casjens, S. (2003) Mol. Microbiol. 49, 277-300.
57. Masui, S., Kamoda, S., Sasaki, T. & Ishikawa, H. (2000) J. Mol. Evol. 51, 491-497.
58. Bordenstein, S. R. & Wernegreen, J. J. (2004) Mol. Biol. Evol. 21, 1981-1991.
59. Simkins, S. F., Walker, T., Lund, A. R., Steven, A. R., Makepeace, B. L., Godfray, H. C. J. & Parkhill, J. (2005) Nature 436, 257-260.
60. Montllor, C. B., Maxmen, A. & Purcell, A. H. (2002) Ecol. Entomol. 27, 189-195.
61. Tsuchida, T., Koga, R. & Fukatsu, T. (2004) Science 303, 1989.
62. Ferrari, J., Darby, A. C., Daniell, T. J. & Godfray, H. J. C. (2004) Ecol. Entomol. 29, 60-65.
63. Chenna, R., Sugawara, H., Koike, T., Lopez, R., Gibson, T.J., Higgins, D.G. & Thompson, J. D. (2003) Nucleic Acids Res. 31, 3497-3500.
64. Posada, D. & Crandall, K. A. (1998) Bioinformatics 14, 817-818.
65. Swofford, D. L. (2002) PAUP*: Phylogenetic Analysis Using Parsimony (* and Other Methods) (Sinauer, Sunderland, MA), version 4.0 Beta.