-
1
-
-
0038039701
-
Haplotypes and informative SNP selection algorithms: Don't block out information
-
Bafna V, Halldórsson BV, Schwartz R, Clark AG, Istrail S: Haplotypes and informative SNP selection algorithms: don't block out information. In Proc. RECOMB'03 2003, pages 19-27.
-
(2003)
Proc. RECOMB'03
, pp. 19-27
-
-
Bafna, V.1
Halldórsson, B.V.2
Schwartz, R.3
Clark, A.G.4
Istrail, S.5
-
2
-
-
0346373654
-
Selecting a maximally informative set of single-nucleotide polymorphisms for association analyses using linkage disequilibrium
-
Carlson CS, Eberle MA, Rieder MJ, Yi Q, Kruglyak L, Nickerson DA: Selecting a maximally informative set of single-nucleotide polymorphisms for association analyses using linkage disequilibrium. Am. J. Hum. Genet. 2004, 74:106-120.
-
(2004)
Am. J. Hum. Genet.
, vol.74
, pp. 106-120
-
-
Carlson, C.S.1
Eberle, M.A.2
Rieder, M.J.3
Yi, Q.4
Kruglyak, L.5
Nickerson, D.A.6
-
4
-
-
0034791035
-
High-resolution haplotype structure in the human genome
-
Daly MJ, Rioux JD, Schaffner SF, Hudson TJ, Lander ES: High-resolution haplotype structure in the human genome. Nat. Genet. 2001, 29(2):229-232.
-
(2001)
Nat. Genet.
, vol.29
, Issue.2
, pp. 229-232
-
-
Daly, M.J.1
Rioux, J.D.2
Schaffner, S.F.3
Hudson, T.J.4
Lander, E.S.5
-
5
-
-
0036959271
-
Interior methods for nonlinear optimization
-
Forsgren A, Gill PE, and Wright MH: Interior methods for nonlinear optimization. SIAM Rev. 2002, 44:525-597.
-
(2002)
SIAM Rev.
, vol.44
, pp. 525-597
-
-
Forsgren, A.1
Gill, P.E.2
Wright, M.H.3
-
7
-
-
4444326345
-
Optimal haplotype block-free selection of tagging SNPs for genome-wide association studies
-
Halldórsson BV, Bafna V, Lippert R, Schwartz R, Vega FM, Clark AG, Istrail S: Optimal haplotype block-free selection of tagging SNPs for genome-wide association studies. Genome Research 2004, pages 1633-1640.
-
(2004)
Genome Research
, pp. 1633-1640
-
-
Halldórsson, B.V.1
Bafna, V.2
Lippert, R.3
Schwartz, R.4
Vega, F.M.5
Clark, A.G.6
Istrail, S.7
-
8
-
-
4444367508
-
Haplotype reconstruction from genotype data using imperfect phylogeny
-
Halperin E, Eskin E: Haplotype reconstruction from genotype data using imperfect phylogeny. Bioinformatics 2004.
-
(2004)
Bioinformatics
-
-
Halperin, E.1
Eskin, E.2
-
9
-
-
13844313862
-
Whole-genome patterns of common DNA variation in three human populations
-
Hinds DA, Stuve LL, Nilsen GB, Halperin E, Eskin E, Ballinger DG, Frazer KA, Cox DR: Whole-genome patterns of common DNA variation in three human populations. Science 2005, 307:1072-1079.
-
(2005)
Science
, vol.307
, pp. 1072-1079
-
-
Hinds, D.A.1
Stuve, L.L.2
Nilsen, G.B.3
Halperin, E.4
Eskin, E.5
Ballinger, D.G.6
Frazer, K.A.7
Cox, D.R.8
-
10
-
-
0036184745
-
Generating samples under a Wright-Fisher neutral model of genetic variation
-
Hudson RR: Generating samples under a Wright-Fisher neutral model of genetic variation. Bioinformatics 2002, 18:337-338.
-
(2002)
Bioinformatics
, vol.18
, pp. 337-338
-
-
Hudson, R.R.1
-
11
-
-
84874659173
-
-
LP Solve
-
LP Solve [http://www.cs.sunysb.edu/~algorith/implement/lp_solve/ implement.shtml]
-
-
-
-
12
-
-
0036138183
-
Bayesian haplotype inference for multiple linked single-nucleotide polymorphisms
-
Niu T, Qin Z, Xu X, Liu JS: Bayesian haplotype inference for multiple linked single-nucleotide polymorphisms. Am. J. Hum. Genet. 2002, 70:157-159.
-
(2002)
Am. J. Hum. Genet.
, vol.70
, pp. 157-159
-
-
Niu, T.1
Qin, Z.2
Xu, X.3
Liu, J.S.4
-
13
-
-
0035941029
-
Blocks of limited haplotype diversity revealed by high-resolution scanning of human chromosome 21
-
Patil N, Berno AJ, Hinds DA, Barrett WA, Doshi JM, Hacker CR, Kautzer CR, Lee DH, Marjoribanks C, McDonough DP, Nguyen BT, Norris MC, Sheehan JB, Shen N, Stern D, Stokowski RP, Thomas DJ, Trulson MO, Vyas KR, Frazer KA, Fodor SP, Cox DR: Blocks of limited haplotype diversity revealed by high-resolution scanning of human chromosome 21. Science 2001, 294:1719-1723.
-
(2001)
Science
, vol.294
, pp. 1719-1723
-
-
Patil, N.1
Berno, A.J.2
Hinds, D.A.3
Barrett, W.A.4
Doshi, J.M.5
Hacker, C.R.6
Kautzer, C.R.7
Lee, D.H.8
Marjoribanks, C.9
McDonough, D.P.10
Nguyen, B.T.11
Norris, M.C.12
Sheehan, J.B.13
Shen, N.14
Stern, D.15
Stokowski, R.P.16
Thomas, D.J.17
Trulson, M.O.18
Vyas, K.R.19
Frazer, K.A.20
Fodor, S.P.21
Cox, D.R.22
more..
-
14
-
-
0242691208
-
A comparison of bayesian methods for haplotype reconstruction from population genotype data
-
Stephens M, Donnelly P: A comparison of bayesian methods for haplotype reconstruction from population genotype data. Am. J. Hum. Genet. 2003, 73:1162-1169.
-
(2003)
Am. J. Hum. Genet.
, vol.73
, pp. 1162-1169
-
-
Stephens, M.1
Donnelly, P.2
-
15
-
-
0141617556
-
Haplotype inference by maximum parsimony
-
Wang L, Xu Y: Haplotype inference by maximum parsimony. Bioinformatics 2003, 19(14):1773-1780.
-
(2003)
Bioinformatics
, vol.19
, Issue.14
, pp. 1773-1780
-
-
Wang, L.1
Xu, Y.2
-
16
-
-
0038472056
-
Efficiency of single-nucleotide polymorphism haplotype estimation from pooled DNA
-
Yang Y, Zhang J, Hoh J, Matsuda F, Xu P, Lathrop M, Ott J: Efficiency of single-nucleotide polymorphism haplotype estimation from pooled DNA. Proc. Nat. Acad. Sci. 2003, 100(12):7225-7230.
-
(2003)
Proc. Nat. Acad. Sci.
, vol.100
, Issue.12
, pp. 7225-7230
-
-
Yang, Y.1
Zhang, J.2
Hoh, J.3
Matsuda, F.4
Xu, P.5
Lathrop, M.6
Ott, J.7
-
17
-
-
0037188541
-
A dynamic programming algorithm for haplotype partitioning
-
Zhang K, Deng M, Chen T, Waterman MS, Sun F: A dynamic programming algorithm for haplotype partitioning. Proc. Nat. Acad. Sci. 2002, 99(11):7335-7339.
-
(2002)
Proc. Nat. Acad. Sci.
, vol.99
, Issue.11
, pp. 7335-7339
-
-
Zhang, K.1
Deng, M.2
Chen, T.3
Waterman, M.S.4
Sun, F.5
-
18
-
-
0038052656
-
Haplotype block partition with limited resources and applications to human chromosome 21 haplotype data
-
Zhang K, Sun F, Waterman MS, Chen T: Haplotype block partition with limited resources and applications to human chromosome 21 haplotype data. Am. J. Hum. Genet. 2003, 73:63-73.
-
(2003)
Am. J. Hum. Genet.
, vol.73
, pp. 63-73
-
-
Zhang, K.1
Sun, F.2
Waterman, M.S.3
Chen, T.4
-
19
-
-
2442658957
-
Haplotype block partition and tag SNP selection using genotype data and their applications to association studies
-
Zhang K, Qin ZS, Liu JS, Chen T, Waterman MS, Sun F: Haplotype block partition and tag SNP selection using genotype data and their applications to association studies. Genome Research 2004, 14:908-916.
-
(2004)
Genome Research
, vol.14
, pp. 908-916
-
-
Zhang, K.1
Qin, Z.S.2
Liu, J.S.3
Chen, T.4
Waterman, M.S.5
Sun, F.6
-
20
-
-
0036952693
-
GENECOUNTING: Haplotype analysis with missing genotypes
-
Zhao JH, Lissarrague S, Essioux L, Sham PC: GENECOUNTING: haplotype analysis with missing genotypes. Bioinformatics 2002, 18:1694-1695.
-
(2002)
Bioinformatics
, vol.18
, pp. 1694-1695
-
-
Zhao, J.H.1
Lissarrague, S.2
Essioux, L.3
Sham, P.C.4
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