Genetic diversity of BVDV: Consequences for classification and molecular epidemiology

Preventive Veterinary Medicine

Volumn 72, Issue 1-2, 2005, Pages 31-35

  Vilcek, S ^a   Durkovic, B ^a   Kolesarova, M ^b   Paton, D J ^c  

^a UNIVERSITY OF VETERINARY MEDICINE   (Slovakia)

^b P J AFÁRIK UNIVERSITY   (Slovakia)

^c INSTITUTE FOR ANIMAL HEALTH   (United Kingdom)

Author keywords

BVDV; Genetic typing; Molecular epidemiology; Pestivirus

Indexed keywords

ANIMAL; BOVINE DIARRHEA VIRUS; CATTLE; CATTLE DISEASE; CLASSIFICATION; CONFERENCE PAPER; EPIDEMIOLOGY; GENETIC VARIABILITY; GENETICS; GENOTYPE; VIROLOGY;

ANIMALS; BOVINE VIRUS DIARRHEA-MUCOSAL DISEASE; CATTLE; DIARRHEA VIRUSES, BOVINE VIRAL; EPIDEMIOLOGY, MOLECULAR; GENOTYPE; VARIATION (GENETICS);

BOS TAURUS; BOVINAE; BOVINE VIRAL DIARRHEA VIRUS 1; PESTIVIRUS;

EID: 27744493196     PISSN: 01675877     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.prevetmed.2005.08.004     Document Type: Conference Paper

References (25)

1. P. Arias, M. Orlich, M. Prieto, S. Cedillo Rosales, H.J. Thiel, M. Alvarez, and P. Becher Genetic heterogeneity of bovine viral diarrhoea viruses from Spain Vet. Microbiol. 96 2003 327 336
2. C. Baule, M. van Vuuren, J.P. Lowings, and S. Belak Genetic heterogeneity of bovine viral diarrhoea viruses isolated in Southern Africa Virus Res. 52 1997 205 220
3. P. Becher, M. Orlich, A. Kosmidou, M. Konig, M. Baroth, and H.J. Thiel Genetic diversity of pestiviruses: identification of novel groups and implication for classification Virology 262 1999 64 71
4. B. Couvreur, C. Letellier, A. Collard, P. Quenon, P. Dehan, C. Hamers, P.P. Pastoret, and P. Kerkhofs Genetic and antigenic variability in bovine viral diarrhea virus (BVDV) isolates from Belgium Virus Res. 85 2002 17 28
5. E. Falcone, P. Cordioli, M. Tarantino, M. Muscillo, G. La Rosa, and M. Tollis Genetic heterogeneity of bovine viral diarrhoea virus in Italy Vet. Res. Commun. 27 2003 485 494
6. Felsenstein, J., 1993. PHYLIP (Phylogeny Inference Package), Version 3.5c. Department of Genetics, University of Washington, Seattle.
7. E.F. Flores, J.F. Ridpath, R. Weiblen, F.S.F. Vogel, and L.H. Gil Phylogenetic analysis of Brazilian bovine viral diarrhea virus type 2 (BVDV-2) isolates: evidence for a subgenotype within BVDV-2 Virus Res. 87 2002 51 60
8. T.J. Mahony, F.M. McCarthy, J.L. Gravel, B. Corney, P.L. Young, and S. Vilcek Genetic analysis of bovine viral diarrhoea viruses from Australia Vet. Microbiol. 106 2005 1 6
9. N. Mishra, B. Pattnaik, S. Vilcek, S.S. Patil, P. Jain, N. Swamy, S. Bhatia, and H.K. Pradhan Genetic typing of bovine viral diarrhoea virus isolates from India Vet. Microbiol. 104 2004 207 212
10. R.D.M. Page Treeview: an application to display phylogenetic trees on personal computer Comput. Appl. Biosci. 12 1996 357 358
11. C. Pellerin, J. van den Hurk, J. Lecomte, and P. Tijssen Identification of a new group of bovine viral diarrhea virus strains associated with severe outbreaks and high mortalities Virology 203 1994 260 268
12. A. Pratelli, V. Martella, F. Cirone, D. Buonavoglia, G. Elia, M. Tempesta, and C. Bionavoglia Genomic characterization of pestiviruses from lambs and kids in southern Italy J. Virol. Meth. 94 2001 81 85
13. J. Ridpath, S.R. Bolin, and E.J. Dubovi Segregation of bovine viral diarrhea virus into genotypes Virology 205 1994 66 74
14. H.A. Schmidt, K. Strimmer, M. Vingron, and A. von Haeseler TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing Bioinformatics 18 2002 502 504
15. M. Tajima, H.-R. Frey, O. Yamato, Y. Maede, V. Moennig, H. Scholz, and I. Greiser-Wilke Prevalence of genotypes 1 and 2 of bovine viral diarrhoea virus in Lower Saxony, Germany Virus Res. 76 2001 31 42
16. J.D. Thompson, D.G. Higgins, and T.J. Gibson Clustal W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice Nucl. Acids Res. 22 1994 4673 4680
17. I. Toplak, T. Sandvik, D. Barlic-Maganja, J. Grom, and D.J. Paton Genetic typing of bovine viral diarrhoea virus: most Slovenian isolates are of genotypes 1d and 1f Vet. Microbiol. 99 2004 175 185
18. S. Vilcek, T.W. Drew, A. McGoldrick, and D.J. Paton Genetic typing of bovine pestiviruses from England and Wales Vet. Microbiol. 69 1999 227 237
19. S. Vilcek, B. Durkovic, M. Bobakova, G. Sharp, and D.J. Paton Identification of bovine viral diarrhoea virus 2 in cattle in Slovakia Vet. Res. 151 2002 150 152
20. S. Vilcek, B. Durkovic, M. Kolesarova, I. Greiser-Wilke, and D. Paton Genetic diversity of international bovine viral diarrhoea virus (BVDV) isolates: identification of a new BVDV-1 genetic group Vet. Res. 35 2004 609 615
21. S. Vilcek, I. Greiser-Wilke, B. Durkovic, W. Obritzhauser, A. Deutz, and J. Kofer Genetic diversity of recent bovine viral diarrhoea viruses from the Southern of Austria (Styria) Vet. Microbiol. 91 2003 285 291
22. S. Vilcek, A.J. Herring, J.A. Herring, P.F. Nettleton, J.P. Lowings, and D.J. Paton Pestiviruses isolated from pigs, cattle and sheep can be allocated into at least three genogroups using polymerase chain reaction and restriction endonuclease analysis Arch. Virol. 136 1994 309 323
23. S. Vilcek, D.J. Paton, B. Durkovic, L. Strojny, G. Ibata, A. Moussa, A. Loitsch, W. Rossmanith, S. Vega, M.T. Scicluna, and V. Palfi Bovine viral diarrhoea virus genotype 1 can be separated into at least eleven genetic groups Arch. Virol. 146 2001 99 115
24. P.R. Wakeley, J.L.E. Turner, G. Ibata, D.P. King, T. Sandvik, P. Howard, and T.W. Drew Characterisation of a type 2 bovine viral diarrhoea virus isolated from cattle in the UK Vet. Microbiol. 102 2004 19 24
25. A. Wolfmeyer, G. Wolf, M. Beer, W. Strube, H.R. Hehnen, N. Schmeer, and O.R. Kaaden Genomic (5′-UTR) and serological differences among German BVDV field isolates Arch. Virol. 142 1997 2049 2057