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Volumn 6, Issue SUPPL. 2, 2005, Pages

Automating genomic data mining via a sequence-based matrix format and associative rule set

Author keywords

Association rule discovery; Data mining; Format specifications; Genomics

Indexed keywords

AMOUNT OF INFORMATION; ASSOCIATION RULE DISCOVERY; ASSOCIATIVE RULE; CLASSIFICATION TREES; CORRELATIVE ANALYSIS; GENOMICS; SEQUENCE DATA; SICKLE-CELL ANEMIA;

EID: 27644594001     PISSN: 14712105     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-6-S2-S2     Document Type: Article
Times cited : (7)

References (32)
  • 1
    • 0037125152 scopus 로고    scopus 로고
    • Integromics: Challenges in data integration
    • REPORTS4027
    • Venkatesh TV, Harlow HB: Integromics: challenges in data integration. Genome Biol 2002, 3(8):REPORTS4027.
    • (2002) Genome Biol. , vol.3 , Issue.8
    • Venkatesh, T.V.1    Harlow, H.B.2
  • 2
    • 0041706175 scopus 로고    scopus 로고
    • Data integration - Connecting the dots
    • Searls DB: Data integration - connecting the dots. Nat Biotechnol 2003, 21(8):844-845.
    • (2003) Nat. Biotechnol. , vol.21 , Issue.8 , pp. 844-845
    • Searls, D.B.1
  • 3
    • 12144262660 scopus 로고    scopus 로고
    • Data integration: Challenges for drug discovery
    • Searls DB: Data integration: challenges for drug discovery. Nat Rev Drug Discov 2005, 4(1):45-58.
    • (2005) Nat. Rev. Drug Discov. , vol.4 , Issue.1 , pp. 45-58
    • Searls, D.B.1
  • 6
    • 0033990063 scopus 로고    scopus 로고
    • GCG: The Wisconsin Package of sequence analysis programs
    • Womble DD: GCG: The Wisconsin Package of sequence analysis programs. Methods Mol Biol 2000, 132:3-22.
    • (2000) Methods Mol. Biol. , vol.132 , pp. 3-22
    • Womble, D.D.1
  • 8
    • 0035220378 scopus 로고    scopus 로고
    • Null hypothesis significance testing. On the survival of a flawed method
    • Krueger J: Null hypothesis significance testing. On the survival of a flawed method. Am Psychol 2001, 56(1):16-26.
    • (2001) Am. Psychol. , vol.56 , Issue.1 , pp. 16-26
    • Krueger, J.1
  • 10
    • 0036224399 scopus 로고    scopus 로고
    • Genome informatics for data-driven biology
    • REPORTS4010
    • Nakai K, Vert JP: Genome informatics for data-driven biology. Genome Biol 2002, 3(4):REPORTS4010.
    • (2002) Genome Biol. , vol.3 , Issue.4
    • Nakai, K.1    Vert, J.P.2
  • 11
    • 0027141519 scopus 로고
    • Number of CpG islands and genes in human and mouse
    • Antequera F, Bird A: Number of CpG islands and genes in human and mouse. Proc Natl Acad Sci U S A 1993, 90(24):11995-11999.
    • (1993) Proc. Natl. Acad. Sci. U. S. A. , vol.90 , Issue.24 , pp. 11995-11999
    • Antequera, F.1    Bird, A.2
  • 12
    • 0023216891 scopus 로고
    • CpG islands in vertebrate genomes
    • Gardiner-Garden M, Frommer M: CpG islands in vertebrate genomes. J Mol Biol 1987, 196(2):261-282.
    • (1987) J. Mol. Biol. , vol.196 , Issue.2 , pp. 261-282
    • Gardiner-Garden, M.1    Frommer, M.2
  • 14
    • 0038745614 scopus 로고    scopus 로고
    • Integrating Biological Databases
    • (May 2003)
    • Stein L: Integrating Biological Databases. Genetics 2003, 4(May 2003):337-345.
    • (2003) Genetics , vol.4 , pp. 337-345
    • Stein, L.1
  • 17
    • 2942579439 scopus 로고    scopus 로고
    • AnaBench: A Web/CORBA-based workbench for biomolecular sequence analysis
    • Badidi E, De Sousa C, Lang BF, Burger G: AnaBench: a Web/CORBA-based workbench for biomolecular sequence analysis. BMC Bioinformatics 2003, 4(1):63.
    • (2003) BMC Bioinformatics , vol.4 , Issue.1 , pp. 63
    • Badidi, E.1    De Sousa, C.2    Lang, B.F.3    Burger, G.4
  • 20
    • 27644524993 scopus 로고    scopus 로고
    • Application of XML Schema and Active Rules System in Management and Integration of Heterogeneous Biological Data
    • March 10-12 2003 2003; Bethesda, MD, USA
    • Shui WM, Wong RK: Application of XML Schema and Active Rules System in Management and Integration of Heterogeneous Biological Data. Proceedings of IEEE International Symposium on Bioinformatics and BioEngineering (BIBE): March 10-12, 2003 2003; Bethesda, MD, USA 2003:367-374.
    • (2003) Proceedings of IEEE International Symposium on Bioinformatics and BioEngineering (BIBE) , pp. 367-374
    • Shui, W.M.1    Wong, R.K.2
  • 21
    • 2942541277 scopus 로고    scopus 로고
    • Predicting co-complexed protein pairs using genomic and proteomic data integration
    • Zhang LV, Wong SL, King OD, Roth FP: Predicting co-complexed protein pairs using genomic and proteomic data integration. BMC Bioinformatics 2004, 5(1):38.
    • (2004) BMC Bioinformatics , vol.5 , Issue.1 , pp. 38
    • Zhang, L.V.1    Wong, S.L.2    King, O.D.3    Roth, F.P.4
  • 22
    • 25444512373 scopus 로고    scopus 로고
    • Integrating alternative splicing detection into gene prediction
    • Foissac S, Schiex T: Integrating alternative splicing detection into gene prediction. BMC Bioinformatics 2005, 6(1):25.
    • (2005) BMC Bioinformatics , vol.6 , Issue.1 , pp. 25
    • Foissac, S.1    Schiex, T.2
  • 23
    • 13244295475 scopus 로고    scopus 로고
    • A computational approach for ordering signal transduction pathway components from genomics and proteomics Data
    • Liu Y, Zhao H: A computational approach for ordering signal transduction pathway components from genomics and proteomics Data. BMC Bioinformatics 2004, 5(1):158.
    • (2004) BMC Bioinformatics , vol.5 , Issue.1 , pp. 158
    • Liu, Y.1    Zhao, H.2
  • 25
    • 0030449157 scopus 로고    scopus 로고
    • The statistical significance of nucleotide position-weight matrix matches
    • Claverie JM, Audic S: The statistical significance of nucleotide position-weight matrix matches. Comput Appl Biosci 1996, 12(5):431-439.
    • (1996) Comput. Appl. Biosci. , vol.12 , Issue.5 , pp. 431-439
    • Claverie, J.M.1    Audic, S.2
  • 26
    • 0004109056 scopus 로고
    • Inductive Logic Programming
    • London: Academic Press
    • Muggleton S: Inductive Logic Programming. London: Academic Press; 1992.
    • (1992)
    • Muggleton, S.1
  • 27
    • 34249966007 scopus 로고
    • The CN2 Induction Algorithm
    • Clark P, Niblett T: The CN2 Induction Algorithm. Machine Learning 1989, 3(4):261-283.
    • (1989) Machine Learning , vol.3 , Issue.4 , pp. 261-283
    • Clark, P.1    Niblett, T.2
  • 28
    • 0003500248 scopus 로고
    • C4.5: Programs for Machine Learning
    • Morgan Kaufmann
    • Quinlan JR: C4.5: Programs for Machine Learning: Morgan Kaufmann; 1993.
    • (1993)
    • Quinlan, J.R.1
  • 29
    • 0003046840 scopus 로고
    • A Theory and Methodology of Inductive Learning: Developing Foundations for Multistrategy Learning
    • Edited by: Michalski RS, Carbonell JG, Mitchell TM. Palo Alto, CA: Morgan Kaufmann
    • Michalski RS: A Theory and Methodology of Inductive Learning: Developing Foundations for Multistrategy Learning. In Machine Learning. An Artificial Intelligence Approach Volume I. Edited by: Michalski RS, Carbonell JG, Mitchell TM. Palo Alto, CA: Morgan Kaufmann; 1983.
    • (1983) Machine Learning: An Artificial Intelligence Approach , vol.1
    • Michalski, R.S.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.