Clusterization of halophilic and halotolerant eubacteria using whole-cell protein electrophoresis data

Microbiology

Volumn 69, Issue 5, 2000, Pages 582-587

  Bykova, S A ^a   Zvyagintseva, I S ^a   Akhlynin, D S ^a   Belyaev, S S ^a   Gal'chenko, V F ^a  

^a RUSSIAN ACADEMY OF SCIENCES   (Russian Federation)

Author keywords

Gel electrophoresis of proteins; Halotolerant eubacteria; Taxonomy

Indexed keywords

EID: 27644517050     PISSN: 00262617     EISSN: None     Source Type: Journal    
DOI: 10.1007/BF02756812     Document Type: Article

References (23)

1. Kersters, K. and Deley, J., Classification and Identification of Bacteria by Electrophoresis of Their Proteins, Microbiological Classification and Identification, Goodfellow, M. and Board, R.J., Eds., London: Academic, 1980, pp. 273-297.
2. Jackman, P.J.H., Bacterial Taxonomy Based on Electrophoretic Whole-Cell Protein Patterns, Chemical Methods in Bacterial Systematics, Goodfellow, M. and Minnikin, D.E., Eds., London: Academic, 1985, pp. 115-129.
3. Owen, R.J. and Jacman, P.J.H., The Similarities between Pseudomonas paucimobilis and Allied Bacteria Derived from Analysis of Deoxyribonucleic Acid and Electrophoretic Protein Patterns, J. Gen. Microbiol., 1982, vol. 128, no. 2, pp. 2945-2954.
4. Vandamme, P., Vancanneyt, M., Pot, B., Mels, L., Hoste, B., Dewttinck, D., Vlaes, L., Van Den Borre, C., Higgins, R., Hommez, J., Kersters, K., Butzler, J.-P., and Goossens, H., Polyphasic Taxonomic Study of the Emended Genus Arcobacter with Arcobacter butzlery comb. nov. and Arcobacter skirrowii sp. nov., an Aerotolerant Bacterium Isolated from Veterinary Specimens, Int. J. Syst. Bacteriol., 1992, vol. 42, no. 3, pp. 344-356.
5. Vandamme, P., Pot, B., Gillis, M., De Vos, P., Kersters, K., and Swings, J., Polyphasic Taxonomy, a Consensus Approach to Bacterial Systematics, Microbiol. Rev., 1996, vol. 60, no. 2, pp. 407-438.
6. Mirris, J.A., The Use of Polyacrylamid Gel Electrophoresis in Taxonomy of Brucella, J. Gen. Microbiol., 1973, vol. 76, part 1, pp. 231-237.
7. Gal'chenko, V.F. and Nesterov, A.I., Numerical Analysis of the Protein Electrophoretic Patterns of Obligately Methanotrophic Bacteria, Mikrobiologiya, 1981, vol. 50, no. 6, pp. 973-979.
8. Hesselberg, M. and Vreeland, R.H., Utilization of Protein Profiles for the Characterization of Halophilic Bacteria, Curr. Microbiol., 1995, vol. 31, no. 3, pp. 158-162.
9. Zvyagintseva, I.S., Bykova, S.A., and Gal'chenko, V.F., Taxonomy of Haloarcheas as Revealed by Gel Electrophoresis of Whole-Cell Proteins, Mikrobiologiya, 1999, vol. 68, no. 2, pp. 283-288.
10. Milekhina, E.I., Borzenkov, I.A., Zvyagintseva, I.S., Kostrikina, N.A., and Belyaev, S.S., Some Ecological and Physiological Peculiarities of Aerobic Eubacteria Isolated from Oil Deposits in Tatarstan, Mikrobiologiya, 1998, vol. 67, no. 2, pp. 208-214.
11. Milekhina, E.I., Borzenkov, I.A., Zvyagintseva, I.S., Kostrikina, N.A., and Belyaev, S.S., Characterization of the Hydrocarbon-Oxidizing Bacterium Rhodococcus erythropolis Isolated from an Oil Deposit, Mikrobiologiya, 1998, vol. 67, no. 3, pp. 328-332.
12. Milekhina, E.I., Borzenkov, I.A., Miller, Yu.M., Belyaev, S.S., and Ivanov, M.V., Hydrocarbon-Oxidizing Microflora of Waterflooded Oil Deposits in Tatarstan with Different Mineralizations of Formation Waters, Mikrobiologiya, 1991, vol. 60, no. 4, pp. 747-755.
13. Methods of Taxonomic Analysis, Metody pochvennoi mikrobiologii i biokhimii (Methods of Soil Microbiology and Biochemistry), Zvyagintsev, D.G., Ed., Moscow: Mosk. Gos. Univ., 1991, pp. 131-133.
14. Bergey's Manual of Systematic Bacteriology, 9th ed., Holt, J.G. et al., Eds., Baltimore: Williams & Wilkins, 1993.
15. Nesterenko, O.A., Kvasnikov, E.I., and Nogina, T.M., Nokardiopodobnye i korinepodobnye bakterii (Nocardio- and Coryneforms), Kiev: Naukova Dumka, 1985, pp. 1-334.
16. Dice, L.R., Measures of the Amount of Ecologic Association between Species, Ecology, 1945, vol. 26, pp. 297-302.
17. Sokal, R.R. and Michener, C.D., A Statistical Method for Evaluating Systematic Relationships, Kanzas Univ. Science Bull., 1958, vol. 38, pp. 1402-1421.
18. Lysenko, A.M., Gal'chenko, V.F., and Chernykh, N.A., Taxonomic Study of Methanotrophic Bacteria by the DNA-DNA Hybridization Method, Mikrobiologiya, 1988, vol. 57, no. 5, pp. 816-822.
19. Bulygina, E.S., Galchenko, V.F., Govoruchina, N.I., Netrusov, A.I., Nikitin, D.I., Trotsenko, Yu.A., and Chumakov, K.M., Taxonomy of Methylotrophic Bacteria by 5S Ribosomal RNA Sequencing, J. Gen. Microbiol., 1990, vol. 136, pp. 441-446.
20. Brusseau, G.A., Bulygina, E.S., and Hanson, R.S., Phylogenetic Analysis and Development of Probes for Differentiating Methylotrophic Bacteria, Appl. Environ. Microbiol., 1994, vol. 60, pp. 626-636.
21. Rainey, F.A., Klatte, S., Kroppenstedt, R.M., and Stackebrandt, E., Dietzia, a New Genus Including Dietzia maris comb. nov., Formerly Rhodococcus maris, Int. J. Syst. Bacteriol., 1995, vol. 45, no. 1, pp. 32-36.
22. Stackebrandt, E., Rainey, F.A., and Ward-Rainey, N.L., Proposal for a New Hierarchic Classification System, Actinobacteria classis nov., Int. J. Syst. Bacteriol., 1997, vol. 47, no. 2, pp. 479-491.
23. Costas, M., Classification, Identification, and Typing of Bacteria by the Analysis of Their One-Dimensional Polyacrilamide Gel Electrophoretic Protein Patterns, Adv. Electrophoresis, 1992, vol. 5, pp. 351-408.