Nonacid cleavable detergents applied to MALDI mass spectrometry profiling of whole cells

Journal of Mass Spectrometry

Volumn 40, Issue 10, 2005, Pages 1319-1326

  Norris, Jeremy L ^a   Hangauer, Matthew J ^a   Porter, Ned A ^a   Caprioli, Richard M ^a,b  

^a VANDERBILT UNIVERSITY   (United States)

^b VANDERBILT UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

Cleavable detergent; MALDI; Mass spectrometry; Membrane protein; Molecular profiling

Indexed keywords

CELLS; ESTERS; MASS SPECTROMETRY; MOLECULAR BIOLOGY; PH EFFECTS; PROTEINS; SILANES; SYNTHESIS (CHEMICAL);

CLEAVABLE DETERGENT; MALDI; MEMBRANE PROTEIN; MOLECULAR PROFILING;

DETERGENTS;

CINNAMIC ACID DERIVATIVE; SILANE;

ARTICLE; CELL ULTRASTRUCTURE; MASS SPECTROMETRY; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; PH MEASUREMENT; POLYACRYLAMIDE GEL ELECTROPHORESIS; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN DEGRADATION; PROTEIN STRUCTURE; PROTEIN SYNTHESIS; WHOLE CELL;

CELL LINE, TUMOR; DETERGENTS; HUMANS; MEMBRANE PROTEINS; SENSITIVITY AND SPECIFICITY; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION;

EID: 27644470534     PISSN: 10765174     EISSN: None     Source Type: Journal    
DOI: 10.1002/jms.914     Document Type: Article

References (25)

1. Stryer L. In Biochemistry, 4th ed. W. H. Freeman: New York, 1995; 1064.
2. Schnaible V, Michels J, Zeth K, Freinang J, Weite W, Bühler S, Glocker MO, Przybylski M. Approaches to the characterization of membrane channel proteins (porins) by UV MALDI-MS. Int. J. Mass Spectrum. Ion Process. 1997; 169/170: 165.
3. Rosinke B, Strupat K, Hillenkamp F, Rosenbusch J, Dencher N, Krüger U, Galla H-J. Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry (MALDI-MS) of membrane proteins and non-covalent complexes. Int. J. Mass Spectrom. 1995; 30: 1462.
4. Börnsen KO, Gass MAS, Bruin GJM, Adrichem JHMv, Biro MC, Kresbach GM, Ehrat M. Influence of solvents and detergents on matrix-assisted laser desorption/ionization mass spectrometry measurements of proteins and oligonucleotides. Rapid Commun. Mass Spectrom. 1997; 11: 603.
5. Jeannot MA, Zheng J, Li L. Observation of sodium gel-induced protein modifications in dodecylsulfate polyacrylamide gel electrophoresis and its implications for accurate molecular weight determination of gel-separated proteins by matrix-assisted laser desorption ionization time-of-flight mass spectrometry. J. Am. Soc. Mass Spectrom. 1999; 10: 512.
6. Zhang N, Li L. Ammonium dodecyl sulfate and an alternative to sodium dodecyl sulfate for protein sample preparation with improved performance in MALDI mass spectrometry. Anal. Chem. 2002; 74: 1729.
7. Puchades M, Westman A, Blennow K, Davidsson P. Removal of sodium dodecyl sulfate from protein samples prior to matrix-assisted laser desorption/ ionization mass spectrometry. Rapid Commun. Mass Spectrom. 1999; 13: 344.
8. Ghaim JB, Tsatsos PH, Katsonouri A, Mitchell DM, Salcedo-Hernandez R, Gennis RB. Matrix-assisted laser desorption ionization mass spectrometry of membrane proteins: demonstration of a simple method to determine subunit molecular weights of hydrophobic subunits. Biochim. Biophys. Acta 1997; 1330: 113.
9. Cadene M, Chait BT. A robust, detergent-friendly method for mass spectrometric analysis of integral membrane proteins. Anal. Chem. 2000; 72: 5655.
10. Hellberg P-E, Bergstrom K, Holmberg K. Cleavable surfactants. J. Surf, and Deterg. 2000; 3: 81.
11. Holmberg K. Cleavable surfactants. In Novel Surfactants: Preparation, Applications, and Biodegradability, Holmberg K (ed). Marcel Dekker: New York, 1998; 333.
12. Jaeger DA. Cleavable Surfactants. Supramol. Chem. 1995; 5: 27.
13. Epstein WW, Jones DS, Bruenger E, Rilling HC. The synthesis of a detergent and its use in the isolation and characterization of protein. Anal. Biochem. 1982; 119: 304.
14. Dunkin IR, Gittinger A, Sherrington DC, Whittaker P. A photodestructible surfactant. J. Chem. Soc. Chem. Commun. 1994; 19: 2245.
15. Meng F, Cargile BJ, Patrie SM, Johnson JR, McLoughlin SM, Kelleher NL. Processing complex mixtures of intact proteins for direct analysis by mass spectrometry. Anal. Chem. 2002; 74: 2923.
16. Jaeger DA, Jamrozik J, Golich TG, Clennan MW, Mohebalian J. Preparation and characterization of glycerol-based cleavable surfactants and derived vesicles. J. Am. Chem. Soc. 1989; 111: 3001.
17. Norris JL, Porter NA, Caprioli RM. Mass spectrometry of intracellular and membrane proteins using cleavable detergents. Anal. Chem. 2003; 75: 6642.
18. Norris JL, Porter NA, Caprioli RM. Combination detergent/MALDI matrix: functional cleavable detergents for mass spectrometry. Anal. Chem. 2005; 77: 5036.
19. Stangier P, Palcic MM, Bundle DR. 2-(Dimethyloctylsilanyl)-ethyl lactoside: a versatile intermediate for chemical and enzymatic ganglioside synthesis. Carbohydr. Res. 1995; 267: 153.
20. Ardah AA, Aisa AMA, Richter H. Darstellung von langkettigen 2-(Dimethylalkylsilyl)ethylsacchariden. Pharmazie 2000; 55: 741.
21. Hirakura K, Saida I, Fukai T, Nomura T. Mulberroside-B, a new C-glucosylcoumarin from the cultivated Mu'berry tree (Morus-Lhou koidz) 22:2,5-dihydroxybenzoic acid- a new matrix for laser desorption ionization mass-spectrometry. Heterocycles. 1985; 23: 2239.
22. Strupat K, Karas M, Hillenkamp F. Int. J. Mass Spectrom. Ion Process. 1991; 111: 89.
23. Turner AD, Pizzo SV, Rozakis G, Porter NA. Photochemical activation of acylated α-thrombin. J. Am. Chem. Soc. 1988; 109: 1274.
24. Womack MD, Kendall DA, MacDonald RC. Detergent effects on enzyme activity and solubilization of lipid bilayer membranes. Biochim. Biophys. Acta 1983; 210: 210.
25. Biological detergents table of physical properties, 2003; Sigma-Aldrich, http://www.sigmaaldrich.com/img/assets/4202/Detergent_table2edited.pdf.