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Volumn 61, Issue 3, 2005, Pages 559-569

Minimal surface as a model of β-sheets

Author keywords

protein class; sheets; Minimal surface catenoid

Indexed keywords

BETA PROTEIN; PROTEIN; UNCLASSIFIED DRUG;

EID: 27544508960     PISSN: 08873585     EISSN: None     Source Type: Journal    
DOI: 10.1002/prot.20636     Document Type: Article
Times cited : (22)

References (23)
  • 1
    • 0029121068 scopus 로고
    • Free energy determinants of secondary structure formation: I. α-Helices
    • Yang A-S, Honig B. Free energy determinants of secondary structure formation: I. α-helices. J Mol Biol 1995;252:351-365.
    • (1995) J Mol Biol , vol.252 , pp. 351-365
    • Yang, A.-S.1    Honig, B.2
  • 2
    • 0037436405 scopus 로고    scopus 로고
    • Flexibility of alpha-helices: Results of a statistical analysis of database protein structures
    • Emberly EG, Mukhopadhyay R, Wingreen NS, Tang C. Flexibility of alpha-helices: results of a statistical analysis of database protein structures. J Mol Biol 2003;327:229-237.
    • (2003) J Mol Biol , vol.327 , pp. 229-237
    • Emberly, E.G.1    Mukhopadhyay, R.2    Wingreen, N.S.3    Tang, C.4
  • 3
    • 0015914783 scopus 로고
    • Conformation of twisted β-sheets in proteins
    • Chothia CJ. Conformation of twisted β-sheets in proteins. J Mol Biol 1973;75:295-302.
    • (1973) J Mol Biol , vol.75 , pp. 295-302
    • Chothia, C.J.1
  • 4
    • 0019880372 scopus 로고
    • Conformational and geometrical properties of β-sheets in proteins: I. Parallel β-sheets
    • Salemme FR, Weatherford DW. Conformational and geometrical properties of β-sheets in proteins: I. Parallel β-sheets. J Mol Biol 1981;146:101-117.
    • (1981) J Mol Biol , vol.146 , pp. 101-117
    • Salemme, F.R.1    Weatherford, D.W.2
  • 5
    • 0019880377 scopus 로고
    • Conformational and geometrical properties of β-sheets in proteins: II. Antiparallel β-sheets
    • Salemme FR, Weatherford DW. Conformational and geometrical properties of β-sheets in proteins: II. Antiparallel β-sheets. J Mol Biol 1981;146:119-141.
    • (1981) J Mol Biol , vol.146 , pp. 119-141
    • Salemme, F.R.1    Weatherford, D.W.2
  • 6
    • 76549252207 scopus 로고
    • Configurations of polypeptide chains with favored orientations around single bonds: Two new pleated sheets
    • Pauling L, Corey RB. Configurations of polypeptide chains with favored orientations around single bonds: two new pleated sheets. Proc Natl Acad Sci USA 1951;37:205-211.
    • (1951) Proc Natl Acad Sci USA , vol.37 , pp. 205-211
    • Pauling, L.1    Corey, R.B.2
  • 7
    • 0020491376 scopus 로고
    • Structure of β-sheets: Origin of the right-handed twist and of the increased stability of antiparallel over parallel sheets
    • Chou K-C, Pottle M, Némethy G, Ueda Y, Scheraga HA. Structure of β-sheets: origin of the right-handed twist and of the increased stability of antiparallel over parallel sheets. J Mol Biol 1982;162: 89-112.
    • (1982) J Mol Biol , vol.162 , pp. 89-112
    • Chou, K.-C.1    Pottle, M.2    Némethy, G.3    Ueda, Y.4    Scheraga, H.A.5
  • 8
    • 0001311307 scopus 로고
    • Effect of amino acid composition on the twist and the relative stability of parallel and antiparallel β-sheets
    • Chou K-C, Némethy G, Scheraga HA. Effect of amino acid composition on the twist and the relative stability of parallel and antiparallel β-sheets. Biochemistry 1983;22:6213-6221.
    • (1983) Biochemistry , vol.22 , pp. 6213-6221
    • Chou, K.-C.1    Némethy, G.2    Scheraga, H.A.3
  • 9
    • 0021095536 scopus 로고
    • Role of inter-chain interactions in the stabilization of the right-handed twist of β-sheets
    • Chou K-C, Némethy G, Scheraga HA. Role of inter-chain interactions in the stabilization of the right-handed twist of β-sheets. J Mol Biol 1983;168:389-407.
    • (1983) J Mol Biol , vol.168 , pp. 389-407
    • Chou, K.-C.1    Némethy, G.2    Scheraga, H.A.3
  • 10
    • 0001244377 scopus 로고
    • Origin of the right-handed twist of p-sheets of poly(1 Val) chains
    • Chou K-C, Scheraga HA. Origin of the right-handed twist of p-sheets of poly(1 Val) chains. Proc Natl Acad Sci USA 1982;79: 7047-7051.
    • (1982) Proc Natl Acad Sci USA , vol.79 , pp. 7047-7051
    • Chou, K.-C.1    Scheraga, H.A.2
  • 11
    • 0029078444 scopus 로고
    • Coulombic attractions between partially charged main-chain atoms stabilize the right-handed twist found in most β-strands
    • Maccallum PH, Poet R, Milner-White EJ. Coulombic attractions between partially charged main-chain atoms stabilize the right-handed twist found in most β-strands. J Mol Biol 1995;248:374-384.
    • (1995) J Mol Biol , vol.248 , pp. 374-384
    • Maccallum, P.H.1    Poet, R.2    Milner-White, E.J.3
  • 13
    • 0029150955 scopus 로고
    • Free energy determinants of secondary structure formation: II. Antiparallel β-sheets
    • Yang A-S, Honig B. Free energy determinants of secondary structure formation: II. Antiparallel β-sheets. J Mol Biol 1995;252: 366-376.
    • (1995) J Mol Biol , vol.252 , pp. 366-376
    • Yang, A.-S.1    Honig, B.2
  • 14
    • 0019880375 scopus 로고
    • Conformational and geometrical properties of β-sheets in proteins: III. Isotropically stressed configurations
    • Salemme FR. Conformational and geometrical properties of β-sheets in proteins: III. Isotropically stressed configurations. J Mol Biol 1981;146:143-156.
    • (1981) J Mol Biol , vol.146 , pp. 143-156
    • Salemme, F.R.1
  • 15
    • 0021763964 scopus 로고
    • Twisted hyperboloid (strophoid) as a model of β-barrels in proteins
    • Novotný J, Bruccoleri RE, Newell J. Twisted hyperboloid (strophoid) as a model of β-barrels in proteins. J Mol Biol 1984;177:567-573.
    • (1984) J Mol Biol , vol.177 , pp. 567-573
    • Novotný, J.1    Bruccoleri, R.E.2    Newell, J.3
  • 16
    • 1442300068 scopus 로고    scopus 로고
    • Flexibility of β-sheets: Principal component analysis of database protein structures
    • Emberly EG, Mukhopadhyay R, Wingreen NS, Tang C. Flexibility of β-sheets: principal component analysis of database protein structures. Proteins 2004;55:91-98.
    • (2004) Proteins , vol.55 , pp. 91-98
    • Emberly, E.G.1    Mukhopadhyay, R.2    Wingreen, N.S.3    Tang, C.4
  • 17
    • 0028961335 scopus 로고
    • SCOP: A structural classification of proteins database for the investigation of sequences and structures
    • Murzin AG, Brenner SE, Hubbard T, Chothia C. SCOP: a structural classification of proteins database for the investigation of sequences and structures. J Mol Biol 1995;247:536-540.
    • (1995) J Mol Biol , vol.247 , pp. 536-540
    • Murzin, A.G.1    Brenner, S.E.2    Hubbard, T.3    Chothia, C.4
  • 18
    • 0020997912 scopus 로고
    • Dictionary of protein secondary structure: Pattern recognition of hydrogen-bonded and geometrical features
    • Kabsch W, Sander C. Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features. Biopolymers 1983;22:2577-2637.
    • (1983) Biopolymers , vol.22 , pp. 2577-2637
    • Kabsch, W.1    Sander, C.2
  • 22
    • 0017824077 scopus 로고
    • Structure of prealbumin: Secondary, tertiary and quaternary interactions determined by Fourier refinement at 1.8 Å
    • Blake CCF, Geisow MJ, Oatley SJ, Rérat B, Rérat C. Structure of prealbumin: secondary, tertiary and quaternary interactions determined by Fourier refinement at 1.8 Å. J Mol Biol 1978;121:339-356.
    • (1978) J Mol Biol , vol.121 , pp. 339-356
    • Blake, C.C.F.1    Geisow, M.J.2    Oatley, S.J.3    Rérat, B.4    Rérat, C.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.