메뉴 건너뛰기




Volumn 21, Issue SUPPL. 2, 2005, Pages

A query language for biological networks

Author keywords

[No Author keywords available]

Indexed keywords

ACCESS TO INFORMATION; ALGORITHM; ARTICLE; COMPUTER NETWORK; INFORMATION PROCESSING; INFORMATION RETRIEVAL; INFORMATION SYSTEM; MOLECULAR MODEL; PRIORITY JOURNAL; PROTEIN DATABASE; PROTEIN FUNCTION; PROTEIN INTERACTION; SEMANTICS;

EID: 27544487947     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/bti1105     Document Type: Article
Times cited : (70)

References (27)
  • 2
    • 0037245913 scopus 로고    scopus 로고
    • BIND: The biomolecular interaction network database
    • Bader,G.D. et al. (2003) BIND: The biomolecular interaction network database. Nucleic Acids Res., 31, 248-250.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 248-250
    • Bader, G.D.1
  • 6
    • 0034887203 scopus 로고    scopus 로고
    • Creating the gene ontology resource: Design and implementation
    • GeneOntology Consortium
    • GeneOntology Consortium. (2001). Creating the gene ontology resource: design and implementation. Genome Res., 11, 1425-1433.
    • (2001) Genome Res. , vol.11 , pp. 1425-1433
  • 8
    • 27544487774 scopus 로고    scopus 로고
    • Optimizing syntax patterns for discovering protein-protein interactions
    • Santa Fe, NM, Bioinformatics Track 1
    • Hakenberg,J., Plake,C. and Leser,U. (2005) Optimizing syntax patterns for discovering protein-protein interactions. In Proceedings of the ACM Symposium on Applied Computing, Santa Fe, NM, Bioinformatics Track 1, pp. 195-201.
    • (2005) Proceedings of the ACM Symposium on Applied Computing , pp. 195-201
    • Hakenberg, J.1    Plake, C.2    Leser, U.3
  • 9
    • 9144248312 scopus 로고    scopus 로고
    • IntAct: An open source molecular interaction database
    • (Database issue)
    • Hermjakob,H. et al. (2004) IntAct: An open source molecular interaction database. Nucleic Acids Res., 32 (Database issue), D452-D455.
    • (2004) Nucleic Acids Res. , vol.32
    • Hermjakob, H.1
  • 10
    • 0035042776 scopus 로고    scopus 로고
    • A literature network of human genes for high-throughput analysis of gene expression
    • Jenssen,T.K. et al. (2001) A literature network of human genes for high-throughput analysis of gene expression. Nat. Genet. 28, 21-28.
    • (2001) Nat. Genet. , vol.28 , pp. 21-28
    • Jenssen, T.K.1
  • 11
    • 3242727532 scopus 로고    scopus 로고
    • The Genome Knowledgebase: A resource for biologists and bioinformaticists
    • Joshi-Tope,G. et al. (2003) The Genome Knowledgebase: A resource for biologists and bioinformaticists. Cold Spring Harb. Symp. Quant. Biol., 68, 237-243.
    • (2003) Cold Spring Harb. Symp. Quant. Biol. , vol.68 , pp. 237-243
    • Joshi-Tope, G.1
  • 12
    • 0345863935 scopus 로고    scopus 로고
    • The KEGG resource for deciphering the genome
    • (Database issue)
    • Kanehisa,M. et al. (2004) The KEGG resource for deciphering the genome. Nucleic Acids Res., 32 (Database issue), D277-D280.
    • (2004) Nucleic Acids Res. , vol.32
    • Kanehisa, M.1
  • 13
    • 0036084127 scopus 로고    scopus 로고
    • The EcoCyc database
    • Karp,P.D. et al. (2002) The EcoCyc database. Nucleic Acids Res., 30, 56-58.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 56-58
    • Karp, P.D.1
  • 14
    • 0038479969 scopus 로고    scopus 로고
    • Kinase pathway database: An integrated protein-kinase and NLP-based protein-interaction resource
    • Koike,A. et al. (2003) Kinase pathway database: An integrated protein-kinase and NLP-based protein-interaction resource. Genome Res., 13, 1231-1243.
    • (2003) Genome Res. , vol.13 , pp. 1231-1243
    • Koike, A.1
  • 15
    • 0037944233 scopus 로고    scopus 로고
    • Pathways database system: An integrated system for biological pathways
    • Krishnamurthy,L. et al. (2003) Pathways database system: An integrated system for biological pathways. Bioinformatics, 19, 930-937.
    • (2003) Bioinformatics , vol.19 , pp. 930-937
    • Krishnamurthy, L.1
  • 16
    • 0034714420 scopus 로고    scopus 로고
    • Genome-wide protein interaction maps using two-hybrid systems
    • Legrain,P. and Selig,L. (2000) Genome-wide protein interaction maps using two-hybrid systems. FEBS Lett., 480, 32-36.
    • (2000) FEBS Lett. , vol.480 , pp. 32-36
    • Legrain, P.1    Selig, L.2
  • 17
    • 27544468499 scopus 로고    scopus 로고
    • A query language for biological networks
    • Technischer Report 187, Department for Computer Science, Humboldt-Universität Berlin
    • Leser,U. (2005). A query language for biological networks. Technischer Report 187, Department for Computer Science, Humboldt-Universität Berlin.
    • (2005)
    • Leser, U.1
  • 18
    • 0035002541 scopus 로고    scopus 로고
    • Mining literature for protein-protein interactions
    • Marcotte,E.M. et al. (2001) Mining literature for protein-protein interactions. Bioinformatics, 17, 359-363.
    • (2001) Bioinformatics , vol.17 , pp. 359-363
    • Marcotte, E.M.1
  • 19
    • 0036081482 scopus 로고    scopus 로고
    • Predictome: A database of putative functional links between proteins
    • Mellor,J.C. et al. (2002) Predictome: A database of putative functional links between proteins. Nucleic Acids Res., 30, 306-309.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 306-309
    • Mellor, J.C.1
  • 21
    • 0347755535 scopus 로고    scopus 로고
    • The database of interacting proteins: 2004 update
    • (Database issue)
    • Salwinski,L. et al. (2004) The database of interacting proteins: 2004 update. Nucleic Acids Res., 32 (Database issue) D449-D451.
    • (2004) Nucleic Acids Res. , vol.32
    • Salwinski, L.1
  • 23
    • 0035109648 scopus 로고    scopus 로고
    • ISYS: A decentralized, component-based approach to the integration of heterogeneous bioinformatics resources
    • Siepel,A. et al. (2001) ISYS: A decentralized, component-based approach to the integration of heterogeneous bioinformatics resources. Bioinformatics, 17, 83-94.
    • (2001) Bioinformatics , vol.17 , pp. 83-94
    • Siepel, A.1
  • 24
    • 3142706495 scopus 로고    scopus 로고
    • New methods for joint analysis of biological networks and expression data
    • Sohler,F. et al. (2004) New methods for joint analysis of biological networks and expression data. Bioinformatics, 20, 1517-1521.
    • (2004) Bioinformatics , vol.20 , pp. 1517-1521
    • Sohler, F.1
  • 25
    • 0033786867 scopus 로고    scopus 로고
    • Representing and analysing molecular and cellular function using the computer
    • van Helden,J. et al. (2000) Representing and analysing molecular and cellular function using the computer. Biol. Chem., 381, 921-935.
    • (2000) Biol. Chem. , vol.381 , pp. 921-935
    • van Helden, J.1
  • 26
    • 0037250152 scopus 로고    scopus 로고
    • STRING: A database of predicted functional associations between proteins
    • von Mering,C. et al. (2003) STRING: A database of predicted functional associations between proteins. Nucleic Acids Res., 31, 258-261.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 258-261
    • von Mering, C.1
  • 27
    • 1942469444 scopus 로고    scopus 로고
    • Network motifs in integrated cellular networks of transcription-regulation and protein-protein interaction
    • Yeger-Lotem,E. et al. (2004) Network motifs in integrated cellular networks of transcription-regulation and protein-protein interaction. Proc. Natl Acad. Sci. USA, 101, 5934-5939.
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 5934-5939
    • Yeger-Lotem, E.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.