-
1
-
-
0038522873
-
Genemerge - Post-genomic analysis, data mining and hypothesis testing
-
Castillo-Davis,C. and Hartl,D. (2003) Genemerge - post-genomic analysis, data mining and hypothesis testing. Bioinformatics, 19, 891-892.
-
(2003)
Bioinformatics
, vol.19
, pp. 891-892
-
-
Castillo-Davis, C.1
Hartl, D.2
-
2
-
-
8844270991
-
Determining and analyzing differentially expressed genes from CDNA microarray experiments with complementary designs
-
Conlon,E. et al. (2004) Determining and analyzing differentially expressed genes from CDNA microarray experiments with complementary designs. J. Multivar. Anal., 90, 1-18.
-
(2004)
J. Multivar. Anal.
, vol.90
, pp. 1-18
-
-
Conlon, E.1
-
3
-
-
0037432566
-
e regulon and the identification of additional sporulation genes in Bacillus subtilis
-
e regulon and the identification of additional sporulation genes in Bacillus subtilis. J. Mol. Biol., 327, 945-972.
-
(2003)
J. Mol. Biol.
, vol.327
, pp. 945-972
-
-
Eichenberger, P.1
-
4
-
-
27544508620
-
The entire program of gene expression for a single differentiating cell type
-
accepted for publication
-
Eichenberger,P. et al. (2004) The entire program of gene expression for a single differentiating cell type. PLoS Biol.accepted for publication.
-
(2004)
PLoS Biol.
-
-
Eichenberger, P.1
-
5
-
-
0036889461
-
Functional analysis of the Bacillus subtilis Zur regulon
-
Gaballa,A. et al. (2002) Functional analysis of the Bacillus subtilis Zur regulon. J. Bacteriol., 184, 6508-6514.
-
(2002)
J. Bacteriol.
, vol.184
, pp. 6508-6514
-
-
Gaballa, A.1
-
7
-
-
3242877502
-
BioOptimizer: A Bayesian scoring function approach to motif discovery
-
Jensen,S. and Liu,J. (2004) BioOptimizer: A Bayesian scoring function approach to motif discovery. Bioinformatics, 20, 1557-1564.
-
(2004)
Bioinformatics
, vol.20
, pp. 1557-1564
-
-
Jensen, S.1
Liu, J.2
-
8
-
-
0346490298
-
Computational discovery of gene regulatory binding motifs: A Bayesian perspective
-
Jensen,S. et al. (2004) Computational discovery of gene regulatory binding motifs: A Bayesian perspective. Stat. Sci., 19, 188-204.
-
(2004)
Stat. Sci.
, vol.19
, pp. 188-204
-
-
Jensen, S.1
-
10
-
-
0035228215
-
Bioprospector: Discovering conserved DNA motifs in upstream regulatory regions of co-expressed genes
-
Liu,X. et al. (2001) Bioprospector: Discovering conserved DNA motifs in upstream regulatory regions of co-expressed genes. Pac. Symp. Biocomput., 6, 127-138.
-
(2001)
Pac. Symp. Biocomput.
, vol.6
, pp. 127-138
-
-
Liu, X.1
-
11
-
-
0347126296
-
DBTBS: Database of transcriptional regulation in Bacillus subtilis and its contribution to comparative genomics
-
Makita,Y. et al. (2004) DBTBS: Database of transcriptional regulation in Bacillus subtilis and its contribution to comparative genomics. Nucleic Acids Res., 32, 75-77.
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 75-77
-
-
Makita, Y.1
-
12
-
-
0035253676
-
Phylogenetic footprinting of transcription factor binding sites in proteobacterial genomes
-
McCue,L. et al. (2001) Phylogenetic footprinting of transcription factor binding sites in proteobacterial genomes. Nucleic Acids Res., 29, 774-782.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 774-782
-
-
McCue, L.1
-
13
-
-
0036798220
-
Factors influencing the identification of transcription factor binding sites by cross-species comparison
-
McCue,L. et al. (2002) Factors influencing the identification of transcription factor binding sites by cross-species comparison. Genome Res., 12, 1523-1532.
-
(2002)
Genome Res.
, vol.12
, pp. 1523-1532
-
-
McCue, L.1
-
14
-
-
0028935455
-
Subtilist: A relational database for the Bacillus subtilis genome
-
Moszer,I. et al. (1995) Subtilist: A relational database for the Bacillus subtilis genome. Microbiology, 141, 261-268.
-
(1995)
Microbiology
, vol.141
, pp. 261-268
-
-
Moszer, I.1
-
15
-
-
12244259677
-
Identification of co-regulated genes through Bayesian clustering of predicted regulatory binding sites
-
Qin,Z.S. et al. (2003) Identification of co-regulated genes through Bayesian clustering of predicted regulatory binding sites. Nat. Biotechnol., 21, 435-439.
-
(2003)
Nat. Biotechnol.
, vol.21
, pp. 435-439
-
-
Qin, Z.S.1
-
16
-
-
0035861990
-
Automatic clustering of orthologs and in-paralogs from pair-wise species comparisons
-
Remm,M. et al. (2001) Automatic clustering of orthologs and in-paralogs from pair-wise species comparisons. J. Mol. Biol., 314, 1041-1052.
-
(2001)
J. Mol. Biol.
, vol.314
, pp. 1041-1052
-
-
Remm, M.1
-
17
-
-
0031787969
-
Finding DNA regulatory motifs within unaligned non-coding sequences clustered by whole-genome MRNA quanfitation
-
Roth,F. et al. (1998) Finding DNA regulatory motifs within unaligned non-coding sequences clustered by whole-genome MRNA quanfitation. Nat. Biotechnol., 16, 939-945.
-
(1998)
Nat. Biotechnol.
, vol.16
, pp. 939-945
-
-
Roth, F.1
-
18
-
-
0035684981
-
Definition of the Bacillus subtilis PurR operator using genetic and bioinformatic tools and expansion of the PurR regulon with glyA, guaC, pbuG, xpt-pbuX, yqhZ-folD, and pbuO
-
Saxild,H. et al. (2001) Definition of the Bacillus subtilis PurR operator using genetic and bioinformatic tools and expansion of the PurR regulon with glyA, guaC, pbuG, xpt-pbuX, yqhZ-folD, and pbuO. J. Bacteriol., 183, 6175-6183.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 6175-6183
-
-
Saxild, H.1
-
19
-
-
0016154301
-
The 3′-terminal sequence of Escherichia coli 16S ribosomal RNA: Complementarily to nonsense triplets and ribosome binding sites
-
Shine,J. and Dalgarno,L. (1974) The 3′-terminal sequence of Escherichia coli 16S ribosomal RNA: Complementarily to nonsense triplets and ribosome binding sites. Proc. Natl Acad. Sci. USA, 71, 1342-1346.
-
(1974)
Proc. Natl. Acad. Sci. USA
, vol.71
, pp. 1342-1346
-
-
Shine, J.1
Dalgarno, L.2
-
20
-
-
0344906814
-
Combining phylogenetic data with co-regulated genes to identify regulatory motifs
-
Wang,T. and Stormo,G. (2003) Combining phylogenetic data with co-regulated genes to identify regulatory motifs. Bioinformatics, 19, 2369-2380.
-
(2003)
Bioinformatics
, vol.19
, pp. 2369-2380
-
-
Wang, T.1
Stormo, G.2
|